Publications by authors named "Ekaterina V Manasova"

Guanine (G)-rich nucleic acids can fold into G-quadruplex (G4) structures under permissive conditions. Although many RNAs contain sequences that fold into RNA G4s (rG4s) in vitro, their folding and functions in vivo are not well understood. In this report, we showed that the folding of putative rG4s in human cells into rG4 structures is dynamically regulated under stress.

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Article Synopsis
  • The envelope glycoprotein gp120 of HIV-1 is essential for the virus to enter human cells by attaching to the CD4 protein.
  • Researchers previously developed effective small-molecule entry antagonists with a thiazole ring structure (Scaffold A) and are now investigating other thiazole isomers (Scaffolds B and C) to understand their impact on antiviral effectiveness and cell safety.
  • The study's findings suggest that Scaffold A is the most effective in inhibiting HIV-1, showing greater potency and a better selectivity index compared to the new isomers.
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We present the development of alternative scaffolds and validation of their synthetic pathways as a tool for the exploration of new HIV gp120 inhibitors based on the recently discovered inhibitor of this class, NBD-14136. The new synthetic routes were based on isosteric replacements of the amine and acid precursors required for the synthesis of NBD-14136, guided by molecular modeling and chemical feasibility analysis. To ensure that these synthetic tools and new scaffolds had the potential for further exploration, we eventually tested few representative compounds from each newly designed scaffold against the gp120 inhibition assay and cell viability assays.

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