Publications by authors named "E F Gaffney"

Throughout developmental biology and ecology, transport can be driven by nonlocal interactions. Examples include cells that migrate based on contact with pseudopodia extended from other cells, and animals that move based on their awareness of other animals. Nonlocal integro-PDE models have been used to investigate contact attraction and repulsion in cell populations in 1D.

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Purpose: Standard of care for various retinal diseases involves recurrent intravitreal injections. This motivates mathematical modeling efforts to identify influential factors for ocular drug residence time, aiming to minimize administration frequency. We sought to describe the vitreal diffusion of therapeutics in nonclinical species frequently used during drug development assessments.

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Articular cartilage tissue exhibits a spatial dependence in material properties that govern mechanical behaviour. A mathematical model of cartilage tissue under one dimensional confined compression testing is developed for normal tissue that takes account of these variations in material properties. Modifications to the model representative of a selection of mechanisms driving osteoarthritic cartilage are proposed, allowing application of the model to both physiological and pathophysiological, osteoarthritic tissue.

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Symmetry-breaking instabilities play an important role in understanding the mechanisms underlying the diversity of patterns observed in nature, such as in Turing's reaction-diffusion theory, which connects cellular signalling and transport with the development of growth and form. Extensive literature focuses on the linear stability analysis of homogeneous equilibria in these systems, culminating in a set of conditions for transport-driven instabilities that are commonly presumed to initiate self-organisation. We demonstrate that a selection of simple, canonical transport models with only mild multistable non-linearities can satisfy the Turing instability conditions while also robustly exhibiting only transient patterns.

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Article Synopsis
  • The study focuses on self-organization in biological systems using Turing's mechanism, particularly in layered tissue structures like skin, which include an epidermal layer and a connective tissue layer.
  • It highlights the differences in biochemical reactions and transport processes between the layers, emphasizing the role of chemotaxis in the mesenchyme compared to molecular transport in the epidermis.
  • The researchers analyze stability conditions for pattern formation in this bilayered system, presenting theoretical findings and quantitative Turing conditions, supported by direct numerical simulations and open-source code for further exploration.
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