Publications by authors named "E Emek Onuk"

We assessed genetic diversities among Ichthyophthirius multifiliis (Ich) field isolates collected from farmed rainbow trout (Oncorhynchus mykiss) in Turkey. The overall prevalence of Ich was 35.3% (634/1798).

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Article Synopsis
  • Extending x-ray solution scattering data into the wide-angle regime (WAXS) offers insights into molecular models derived from various methods, like crystallography and molecular dynamics.
  • WAXS data enhances our understanding of macromolecular structure and dynamics, revealing details about protein folding and structural fluctuations that SAXS alone cannot uncover.
  • The technique allows for direct comparisons with molecular dynamics simulations and aids in screening ligand interactions, making it a valuable addition to the tools used in biophysical research.
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Crystal structures of adenylate kinase (AdK) from Escherichia coli capture two states: an "open" conformation (apo) obtained in the absence of ligands and a "closed" conformation in which ligands are bound. Other AdK crystal structures suggest intermediate conformations that may lie on the transition pathway between these two states. To characterize the transition from open to closed states in solution, X-ray solution scattering data were collected from AdK in the apo form and with progressively increasing concentrations of five different ligands.

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Introduction: This study aimed to characterize the microbial communities of primary and secondary/persistent endodontic infections using high-throughput pyrosequencing from the pulverized samples.

Methods: The roots of 20 extracted human teeth with primary endodontic infection and 20 teeth with secondary/persistent endodontic infection were collected. The outer surfaces of the roots were disinfected, and whole roots were cryopulverized.

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Aeromonas hydrophila is known to be causative agent of an infection named as Bacterial haemorrhagic septicaemia or red pest in freshwater fish. The aim of this study was to develop and validate the glycoprotein-based fish vaccine against Aeromonas hydrophila. For this aim, after identification and characterization of A.

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