Publications by authors named "E ENDRES"

Article Synopsis
  • Covalent inhibitors, which react permanently with enzymes, provide longer-lasting effects than noncovalent inhibitors, prompting the need for accurate reactivity predictions.
  • Various computational workflows exist to predict reactivity for drug design, typically tested against model nucleophiles like cysteine or glutathione, but their effectiveness in actual enzyme environments is not well-explored.
  • Using a DFT-based method, the study examined the reactivity of covalent inhibitors designed for ChlaDUB1, concluding that considering the geometric fit of ligands is crucial for effective enzyme inhibition in drug development.
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During the storage and distribution of water in buildings, the excessive growth of pathogens can deteriorate the quality of drinking water. This study aims to investigate the factors influencing this growth and propose technical measures for prevention. The analysis is based on an empirical data set comprising 1361 samples from 204 domestic premise plumbing systems.

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A fundamental precept of chemistry is that properties are manifestations of the elements present and their arrangement in space. Controlling the arrangement of atoms in nanocrystals is not well understood in nanocrystal synthesis, especially in the transition metal chalcogenides and pnictides, which have rich phase spaces. This Perspective will cover some of the recent advances and current challenges.

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The development of cancer therapeutics is often hindered by the fact that specific oncogenes cannot be directly pharmaceutically addressed. Targeting deubiquitylases that stabilize these oncogenes provides a promising alternative. USP28 and USP25 have been identified as such target deubiquitylases, and several small-molecule inhibitors indiscriminately inhibiting both enzymes have been developed.

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A sufficiently stable noncovalent association complex between a covalent inhibitor and its protein target is regarded as a prerequisite for the formation of a covalent complex. As this transient form can hardly be assessed experimentally, computational modeling is required to probe the suitability of a given ligand at this particular stage. To investigate which criteria should be fulfilled by suitable candidates in a molecular dynamics (MD) assessment, a systematic study was conducted with 20 complexes of cathepsin K, a papain-like cysteine protease of pharmaceutical relevance.

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