Publications by authors named "Derek Rogge"

Organic matter is an important constituent of soils that controls many soil functions and is of vital importance for ecosystem services like climate regulation and food security. Soil organic matter (SOM consists of a wide spectrum of different organic substances that are highly heterogeneous in terms of chemical composition, stability against microbial decomposition and turnover time. SOM is heterogeneously distributed in the soil profile impeding its fast assessment.

View Article and Find Full Text PDF

The goal of this project is to identify any in-depth benefits and drawbacks in the diagnosis of amalgam tattoos and other pigmented intraoral lesions using hyperspectral imagery collected from amalgam tattoos, benign, and malignant melanocytic neoplasms. Software solutions capable of classifying pigmented lesions of the skin already exist, but conventional red, green and blue images may be reaching an upper limit in their performance. Emerging technologies, such as hyperspectral imaging (HSI) utilize more than a hundred, continuous data channels, while also collecting data in the infrared.

View Article and Find Full Text PDF

In this study, we examined the suitability of visible and infrared (Vis-NIR) hyperspectral imaging (HSI) for the quantification of prognostic markers in non-Hodgkin lymphoma on the example of the Ki67 proliferation index. Ki67 quantification was done on six follicular lymphomas (FLs) and 12 diffuse large B-cell lymphomas (DLBCLs) by applying classic immunohistochemistry. The Ki67 index was comparatively assessed visually, using HSI-based quantification and a digital imaging analysis (DIA) platform.

View Article and Find Full Text PDF

Rationale: In contaminated soil, copper (Cu) is commonly distributed among various very small particles. To enlighten the qualitative distribution of Cu in a contaminated Technosol (a soil developed from deposited technogenic material) on the sub-micron scale, we used nano-scale secondary ion mass spectrometry (NanoSIMS).

Methods: We studied seven areas (up to 40 μm × 40 μm) on a thin section of a soil horizon by NanoSIMS, measuring C , O , S , Cu and Fe O .

View Article and Find Full Text PDF

The physical, chemical, and biological processes forming the backbone of important soil functions (e.g., carbon sequestration, nutrient and contaminant storage, and water transport) take place at reactive interfaces of soil particles and pores.

View Article and Find Full Text PDF