Mechanistic Investigation of Green Fluorescent Protein Acquiring Energy for Emitting Light: A Theoretical Study.

Green fluorescent protein (GFP) is famous for noninvasively observing the internal biological processes of cells and organisms, revolutionizing the field of cell biology. GFP was first discovered in jellyfish (). The GFP bioluminescence (BL) in can be divided into three stages: the first singlet excited state coelenteramide (S-CTD) is formed in aequorin; GFP acquires energy from S-CTD via an energy transfer (ET) process; and GFP emits green light.

Ab initio spin-mapping non-adiabatic dynamics simulations of photochemistry.

We perform on-the-fly non-adiabatic molecular dynamics simulations using the recently developed spin-mapping formalism. Two quantum dynamics approaches based on this mapping formalism, (i) the fully linearized Spin-LSC and (ii) the partially linearized Spin-PLDM, are explored using the quasi-diabatic propagation scheme. We have performed dynamics simulations in four ab initio molecular models for which benchmark ab initio multiple spawning (AIMS) data have been published.

What Two-Dimensional Electronic Spectroscopy Can Tell Us about Energy Transfer in Dendrimers: Ab Initio Simulations.

Two-dimensional (2D) electronic spectra of the phenylene ethynylene dendrimer with 2-ring and 3-ring branches were evaluated by combining the on-the-fly trajectory surface hopping nonadiabatic dynamics and the doorway-window simulation protocol. The ground state bleach (GSB), stimulated emission (SE), and excited-state absorption (ESA) contributions to the 2D signal were obtained and carefully analyzed. The results demonstrate that the ultrafast intramolecular nonadiabatic excited-state energy transfer (EET) from the 2-ring to the 3-ring units is comprehensively characterized by the SE and ESA signals.

Effect of load-resisting force on photoisomerization mechanism of a single second generation light-driven molecular rotary motor.

A pivotal aspect of molecular motors is their capability to generate load capacity from a single entity. However, few studies have directly characterized the load-resisting force of a single light-driven molecular motor. This research provides a simulation analysis of the load-resisting force for a highly efficient, second-generation molecular motor developed by Feringa et al.

Studies of nonadiabatic dynamics in the singlet fission processes of pentacene dimer via tensor network method.

Singlet fission (SF) is a very significant photophysical phenomenon and possesses potential applications. In this work, we try to give a rather detailed theoretical investigation of the SF process in the stacked polyacene dimer by combining the high-level quantum chemistry calculations and the quantum dynamics simulations based on the tensor network method. Starting with the construction of the linear vibronic coupling model, we explore the pure electronic dynamics and the vibronic dynamics in the SF processes.

Resonance Enhancement of Vibrational Polariton Chemistry Obtained from the Mixed Quantum-Classical Dynamics Simulations.

We applied a variety of mixed quantum-classical (MQC) approaches to simulate the VSC-influenced reaction rate constant. All of these MQC simulations treat the key vibrational levels associated with the reaction coordinate in the quantum subsystem (as quantum states), whereas all other degrees of freedom (DOFs) are treated inside the classical subsystem. We find that, as long as we have the quantum state descriptions for the vibrational DOFs, one can correctly describe the VSC resonance condition when the cavity frequency matches the bond vibrational frequency.

Influence of Mode-Specific Excitation on the Nonadiabatic Dynamics of Methyl Nitrate (CHONO).

The impact of mode-specific vibrational excitations on initial-preparation conditions was studied by examining the excited-state population decay rates in the nonadiabatic dynamics of methyl nitrate (CHONO). In particular, exciting a few specific modes by adding a single quantum of energy clearly decelerated the nonadiabatic dynamics population decay rates. The underlying reason for this slower population decay was explained by analyzing the profiles of the excited-state potential energy surfaces in the Franck-Condon regions and the topology of the S/S conical intersection.

Ab Initio Molecular Cavity Quantum Electrodynamics Simulations Using Machine Learning Models.

We present a mixed quantum-classical simulation of polariton dynamics for molecule-cavity hybrid systems. In particular, we treat the coupled electronic-photonic degrees of freedom (DOFs) as the quantum subsystem and the nuclear DOFs as the classical subsystem and use the trajectory surface hopping approach to simulate non-adiabatic dynamics among the polariton states due to the coupled motion of nuclei. We use the accurate nuclear gradient expression derived from the Pauli-Fierz quantum electrodynamics Hamiltonian without making further approximations.

Quasi-diabatic propagation scheme for simulating polariton chemistry.

We generalize the quasi-diabatic (QD) propagation scheme to simulate the non-adiabatic polariton dynamics in molecule-cavity hybrid systems. The adiabatic-Fock states, which are the tensor product states of the adiabatic electronic states of the molecule and photon Fock states, are used as the locally well-defined diabatic states for the dynamics propagation. These locally well-defined diabatic states allow using any diabatic quantum dynamics methods for dynamics propagation, and the definition of these states will be updated at every nuclear time step.

Molecular design of DBA-type five-membered heterocyclic rings to achieve 200% exciton utilization for electroluminescence.

Achieving high exciton utilization is a long-cherished goal in the development of organic light-emitting diode materials. Herein, a three-step mechanism is proposed to achieve 200% exciton utilization: (i) hot triplet exciton (T) conversion to singlet S; (ii) singlet fission from S into two T; (iii) and then a Dexter energy transfer to phosphors. The requirement is that S should lie slightly lower than or close to T and twice as high as T in energy.

Nuclear gradient expressions for molecular cavity quantum electrodynamics simulations using mixed quantum-classical methods.

We derive a rigorous nuclear gradient for a molecule-cavity hybrid system using the quantum electrodynamics Hamiltonian. We treat the electronic-photonic degrees of freedom (DOFs) as the quantum subsystem and the nuclei as the classical subsystem. Using the adiabatic basis for the electronic DOF and the Fock basis for the photonic DOF and requiring the total energy conservation of this mixed quantum-classical (MQC) system, we derived the rigorous nuclear gradient for the molecule-cavity hybrid system, which is naturally connected to the approximate gradient under the Jaynes-Cummings approximation.

Insight into Isomeric Effect on the Photoluminescence and Mechanoluminescence of Cyanostilbene Derivatives.

Molecular structures, packings, and intermolecular interactions significantly affect the photophysical properties of organic luminogens. In this work, the photoluminescence (PL) and mechanoluminescence (ML) of two pairs of isomers, / and /, were systematically explored. The fluorescence of crystals and is much brighter than that of their isomers and , respectively.

Ultrafast Internal Conversion Dynamics through the on-the-Fly Simulation of Transient Absorption Pump-Probe Spectra with Different Electronic Structure Methods.

An on-the-fly surface-hopping simulation protocol is developed for the evaluation of transient absorption (TA) pump-probe (PP) signals of molecular systems exhibiting internal conversion to the electronic ground state. We study the nonadiabatic dynamics of azomethane and the associating TA PP spectra at three levels of the electronic-structure theory, OM2/MRCI, SA-CASSCF, and XMS-CASPT2. The impact of these methods on the population dynamics and time-resolved TA PP signals is substantially different.

Heavy-Atom-Free Room-Temperature Phosphorescent Rylene Imide for High-Performing Organic Photovoltaics.

Organic phosphorescence, originating from triplet excitons, has potential for the development of new generation of organic optoelectronic materials. Herein, two heavy-atom-free room-temperature phosphorescent (RTP) electron acceptors with inherent long lifetime triplet exctions are first reported. These two 3D-fully conjugated rigid perylene imide (PDI) multimers, as the best nonfullerene wide-bandgap electron acceptors, exhibit a significantly elevated T of ≈2.

Spectral Fingerprint of Excited-State Energy Transfer in Dendrimers through Polarization-Sensitive Transient-Absorption Pump-Probe Signals: On-the-Fly Nonadiabatic Dynamics Simulations.

The time-resolved polarization-sensitive transient-absorption (TA) pump-probe (PP) spectra are simulated using on-the-fly surface-hopping nonadiabatic dynamics and the doorway-window representation of nonlinear spectroscopy. A dendrimer model system composed of two linear phenylene ethynylene units (2-ring and 3-ring) is taken as an example. The ground-state bleach (GSB), stimulated emission (SE), and excited-state absorption (ESA) contributions as well as the total TA PP signals are obtained and carefully analyzed.

Theoretical Insight Into the Ultralong Room-Temperature Phosphorescence of Nonplanar Aromatic Hydrocarbon.

Purely aromatic hydrocarbon materials with ultralong room-temperature phosphorescence (RTP) were reported recently, but which is universally recognized as unobservable. To reveal the inherent luminescent mechanism, two compounds, i.e.

Investigation of nonadiabatic dynamics in the photolysis of methyl nitrate (CHONO) by on-the-fly surface hopping simulation.

The photolysis mechanism of methyl nitrate (CHONO) was studied using the on-the-fly surface hopping dynamics at the XMS-CASPT2 level. Several critical geometries, including electronic state minima and conical intersections, were obtained, which play essential roles in the nonadiabatic dynamics of CHONO. The ultrafast nonadiabatic decay dynamics to the ground state were simulated, which gives a proper explanation on the broad and structureless absorption spectra of CHONO.

Multi-Resonance Deep-Red Emitters with Shallow Potential-Energy Surfaces to Surpass Energy-Gap Law*.

Efficient organic emitters in the deep-red region are rare due to the "energy gap law". Herein, multiple boron (B)- and nitrogen (N)-atoms embedded polycyclic heteroaromatics featuring hybridized π-bonding/ non-bonding molecular orbitals are constructed, providing a way to overcome the above luminescent boundary. The introduction of B-phenyl-B and N-phenyl-N structures enhances the electronic coupling of those para-positioned atoms, forming restricted π-bonds on the phenyl-core for delocalized excited states and thus a narrow energy gap.

Brightening up Circularly Polarized Luminescence of Monosubstituted Polyacetylene by Conformation Control: Mechanism, Switching, and Sensing.

The first example of luminescent monosubstituted polyacetylenes (mono-PAs) is presented, based on a contracted cis-cisoid polyene backbone. It has an excellent circularly polarized luminescence (CPL) performance with a high dissymmetric factor (up to the order of 10 ). The luminescence stems from the helical cis-cisoid PA backbone, which is tightly fixed by the strong intramolecular hydrogen bonds, thereby reversing the energy order of excited states and enabling an emissive energy dissipation.

Prediction of the excited-state reaction channels in photo-induced processes of nitrofurantoin using first-principle calculations and dynamics simulations.

The understanding of the photochemistry of antibiotic compounds is important because it gives the direct information on the possible environmental pollution caused by them. Due to their large size, the theoretical studies of their excited-state reactions are rather challenging. In current work, we combined the on-the-fly trajectory surface-hopping dynamics, conical-intersection optimizations and excited-state pathway calculations to study the photochemistry of the trans-isomer of nitrofurantoin, a widely-used drug to treat the urinary tract infections.

On-the-Fly Symmetrical Quasi-Classical Dynamics with Meyer-Miller Mapping Hamiltonian for the Treatment of Nonadiabatic Dynamics at Conical Intersections.

The on-the-fly version of the symmetrical quasi-classical dynamics method based on the Meyer-Miller mapping Hamiltonian (SQC/MM) is implemented to study the nonadiabatic dynamics at conical intersections of polyatomic systems. The current on-the-fly implementation of the SQC/MM method is based on the adiabatic representation and the dressed momentum. To include the zero-point energy (ZPE) correction of the electronic mapping variables, we employ both the γ-adjusted and γ-fixed approaches.

Analysis of bath motion in MM-SQC dynamics via dimensionality reduction approach: Principal component analysis.

The system-plus-bath model is an important tool to understand the nonadiabatic dynamics of large molecular systems. Understanding the collective motion of a large number of bath modes is essential for revealing their key roles in the overall dynamics. Here, we applied principal component analysis (PCA) to investigate the bath motion in the basis of a large dataset generated from the symmetrical quasi-classical dynamics method based on the Meyer-Miller mapping Hamiltonian nonadiabatic dynamics for the excited-state energy transfer in the Frenkel-exciton model.

Achieving Pure Green Electroluminescence with CIEy of 0.69 and EQE of 28.2% from an Aza-Fused Multi-Resonance Emitter.

Pure green emitters are essential for realizing an ultrawide color gamut in next-generation displays. Herein, by fusing the difficult-to-access aza-aromatics onto B (boron)-N (nitrogen) skeleton, a hybridized multi-resonance and charge transfer (HMCT) molecule AZA-BN was successfully synthesized through an effective one-shot multiple cyclization method. AZA-BN shows pure green fluorescence with photoluminance quantum yield of 99.

Online high-pH reversed-phase liquid chromatography × low-pH reversed-phase liquid chromatography tandem electrospray ionization mass spectrometry combined with pulse elution gradient in the first dimension for the analysis of alkaloids in Macleaya cordata (willd.) R. Br.

An online high-pH reversed-phase liquid chromatography× low-pH reversed-phase liquid chromatography tandem electrospray ionization mass spectrometry combined with pulse elution gradient in the first dimension was constructed to separate and identify alkaloids from Macleaya cordata (willd.) R. Br.