Publications by authors named "Denis Saulnier"

Ten novel Gram-negative, aerobic, non-sporulating, yellow-pigmented rod-shaped bacterial strains motile by gliding were isolated from marine organisms/environments in French Polynesia. Three of them designated as 190524A05c, 190524A02b and 190130A14a were retrieved from orbicular batfish () mucus. Online database comparisons using 16S rRNA amplicons resulted in over 95% similarity to the genus .

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In living organisms, calcium carbonate biomineralization combines complex bio-controlled physical and chemical processes to produce crystalline hierarchical hard tissues (usually calcite or aragonite) typically from an amorphous precursor phase. Understanding the nature of the successive transient amorphous phases potentially involved in the amorphous-to-crystalline transition requires characterization tools, which are able to provide a spatial and spectroscopic analysis of the biomineral structure. In this work, we present a highly sensitive coherent Raman microscopy approach, which allows one to image molecular bond concentrations in post mortem shells and living animals, by exploiting the vibrational signature of the different carbonates compounds.

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  • * Researchers combined serotyping and genome analysis to identify genetic factors in O-antigen production, leading to a more effective multiplex PCR-based serotyping method that outperforms traditional serotyping.
  • * This new method allows for better analysis of fish isolates without clear links to species or geographic origin, and it could aid in disease monitoring, vaccine developments, and understanding fish populations.
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  • The orbicular batfish, vital for aquaculture in French Polynesia, faces severe threats from 'white-patch disease,' causing 20-90% mortality rates in farms since 2011.
  • Researchers have identified a major pathogen linked to this disease through various diagnostic methods, marking a significant finding.
  • Genetic diversity among pathogen isolates was found, which is crucial for developing effective management strategies, including potential vaccination.
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Biomineralization integrates complex physical and chemical processes bio-controlled by the living organisms through ionic concentration regulation and organic molecules production. It allows tuning the structural, optical and mechanical properties of hard tissues during ambient-condition crystallisation, motivating a deeper understanding of the underlying processes. By combining state-of-the-art optical and X-ray microscopy methods, we investigated early-mineralized calcareous units from two bivalve species, Pinctada margaritifera and Pinna nobilis, revealing chemical and crystallographic structural insights.

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Background: Ephippidae fish are characterized by a discoid shape with a very small visceral cavity. Among them has a high economic potential due to its flesh quality and flesh to carcass ratio. Nonetheless, the development of its aquaculture is limited by high mortality rates, especially due to infection, occurring one to three weeks after the transfer of fishes from bio-secure land-based aquaculture system to the lagoon cages for growth.

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Four new brominated tyrosine metabolites, aplyzanzines C-F (-), were isolated from the French Polynesian sponge n. sp., along with the two known 2-aminoimidazolic derivatives, purealidin A () and previously isolated, respectively, from the sponges and Verongula sp.

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  • - Tenacibaculum maritimum causes tenacibaculosis, a serious disease affecting a wide range of marine fish, and its genome analysis involved 25 strains, including 22 newly sequenced ones.
  • - All strains had similar genome sizes (~3.356 Mb) with 2,116 core protein-coding genes, showing moderate nucleotide diversity and a significant role of recombination in their evolution, although links to specific geographical origins still need further investigation.
  • - A new MALDI-TOF-MS typing method was developed to classify T. maritimum isolates into 20 MALDI-Types and 4 MALDI-Groups, offering a fast and cost-effective approach for large-scale epidemiological studies.
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The objective of this study was to observe the impact of temperature on pearl formation using an integrative approach describing the rotation of the pearls, the rate of nacre deposition, the thickness of the aragonite tablets and the biomineralizing potential of the pearl sac tissue though the expression level of some key genes. Fifty pearl oysters were grafted with magnetized nuclei to allow the rotation of the pearls to be described. Four months later, 32 of these pearl oysters were exposed to four temperatures (22, 26, 30 and 34°C) for 2 weeks.

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Environmental parameters, such as food level and water temperature, have been shown to be major factors influencing pearl oyster shell growth and molecular mechanisms involved in this biomineralization process. The present study investigates the effect of food level (i.e.

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To enable the rapid and accurate identification of Vibrio splendidus-related and V. aestuarianus strains associated with Pacific cupped oyster Crassostrea gigas mortality, we developed a duplex Taqman real-time PCR assay and evaluated its efficacy. This technique proved to be rapid, sensitive, and specific and will be particularly valuable for epidemiologic studies.

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This study was designed to identify in the pearl oyster Pinctada margaritifera, used as a bio-accumulator, molecular biomarkers for the presence of heavy metals in the lagoon environment. Pearl oysters were exposed to 2 concentrations (1 and 10μgL) of cadmium (Cd) and chromium (Cr) compared to a control. Twelve target genes encoding proteins potentially involved in the response to heavy metal contamination with antioxidant, detoxification or apoptosis activities were selected.

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  • The adaptive bleaching hypothesis (ABH) suggests that coral bleaching can positively influence coral survival by allowing corals to switch their algal symbionts based on environmental conditions.
  • Researchers employed quantitative PCR (qPCR) technology to analyze five coral species from Moorea, discovering each species had a primary algal clade but also associated with additional clades at low levels.
  • Notably, clade B was identified as a coral symbiont for the first time in the region, indicating a greater diversity of symbiotic relationships and suggesting that corals in French Polynesia may strategically maintain multiple clades for better environmental adaptability.
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The emerging orbicular batfish (Platax orbicularis) aquaculture is the most important fish aquaculture industry in French Polynesia. However, bacterial infections are causing severe mortality episodes. Therefore, there is an urgent need to find an effective management solution.

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Background: Biofloc technology (BFT), a rearing method with little or no water exchange, is gaining popularity in aquaculture. In the water column, such systems develop conglomerates of microbes, algae and protozoa, together with detritus and dead organic particles. The intensive microbial community presents in these systems can be used as a pond water quality treatment system, and the microbial protein can serve as a feed additive.

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  • Coral disease outbreaks have risen significantly in the past 30 years, but the specific causes are still largely unknown, prompting a 14-month survey of coral colonies.
  • The study utilized a bimonthly qPCR method to assess the relationship between Symbiodinium clades and disease susceptibility, revealing that corals with clade D had a better chance of resisting infection by the pathogenic bacteria Vibrio spp.
  • Findings indicated that Vibrio spp. was only present in diseased colonies, hinting at its opportunistic behavior, and suggested that coral health is more dependent on the initial set of Symbiodinium than on adapting to stress by acquiring new clades.
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Background: Color polymorphism in the nacre of pteriomorphian bivalves is of great interest for the pearl culture industry. The nacreous layer of the Polynesian black-lipped pearl oyster Pinctada margaritifera exhibits a large array of color variation among individuals including reflections of blue, green, yellow and pink in all possible gradients. Although the heritability of nacre color variation patterns has been demonstrated by experimental crossing, little is known about the genes involved in these patterns.

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Cultured pearls are the product of grafting and rearing of Pinctada margaritifera pearl oysters in their natural environment. Nucleus rejections and oyster mortality appear to result from bacterial infections or from an inappropriate grafting practice. To reduce the impact of bacterial infections, synthetic antibiotics have been applied during the grafting practice.

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This study compares the antioxidant and antimicrobial transcriptional expression of blue shrimps reared according to two different systems, BioFloc Technology (BFT) and Clear sea Water (CW) and their differential responses when facing an experimental sublethal hydrogen peroxide stress. After 30 days of rearing, juvenile shrimps were exposed to H2O2 stress at a concentration of 30 ppm during 6 h. The oxidative stress caused by H2O2 was examined in the digestive glands of the shrimp, in which antioxidant enzyme (AOE) and antimicrobial peptide (AMP) gene expression were analysed by quantitative real-time PCR.

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Vibrio tubiashii is a marine pathogen isolated from larval and juvenile bivalve molluscs that causes bacillary necrosis. Recent studies demonstrated the isolation of this species in a French experimental hatchery/nursery affecting Crassostrea gigas spat in 2007. Here, using larvae of C.

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Extracellular products (ECPs) of the French Vibrio tubiashii strain 07/118 T2 were previously reported to be toxic for the Pacific oyster Crassostrea gigas. In this study we now assessed host cellular immune responses and bacterial potential effectors by which these ECPs can be associated with host damages. The adhesion capacity (28% inhibition) and phagocytosis ability (56% inhibition) of oyster hemocytes were the main functions affected following in vitro contact between hemocytes and V.

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In this study, we analyzed the combined effect of microalgal concentration and temperature on the shell growth of the bivalve Pinctada margaritifera and the molecular mechanisms underlying this biomineralization process. Shell growth was measured after two months of rearing in experimental conditions, using calcein staining of the calcified structures. Molecular mechanisms were studied though the expression of 11 genes encoding proteins implicated in the biomineralization process, which was assessed in the mantle.

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Article Synopsis
  • In 2007, nine bacterial isolates associated with high mortality in Crassostrea gigas spat were identified in a French hatchery, found to be genetically related to Vibrio tubiashii.
  • The isolate 07/118 T2 showed significant virulence causing 70% mortality and toxicity leading to 41% mortality, alongside a developed QPCR tool for tracking V. tubiashii outbreaks.
  • Surveillance revealed that only two out of 21 hatchery batches tested positive for V. tubiashii DNA, with no detection in field samples, indicating sporadic virulent infections in French oysters.
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Phenoloxidases (POs) are a group of copper proteins including tyrosinase, catecholase and laccase. In several insects and crustaceans, antibacterial substances are produced through the PO cascade, participating in the direct killing of invading microorganisms. However, although POs are widely recognised as an integral part of the invertebrate immune defence system, experimental evidence is lacking that these properties are conserved in molluscs, and more particularly in the Pacific oyster Crassostrea gigas.

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In 2008 and 2009, acute mortalities occurred in France among Pacific cupped oyster, Crassostrea gigas, spat. Different hypothesis including the implication of environmental factors, toxic algae and/or pathogens have been explored. Diagnostic tests indicated that OsHV-1 including a particular genotype, termed OsHV-1 μVar, was detected in most of samples and especially in moribund oysters with the highlighting of virus particles looking like herpes viruses by TEM examination.

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