Cis-trans isomerization of amide bonds impedes de novo design of folded peptoids (poly-N-substituted glycines) with precise secondary structures and affects peptoid-biomolecule binding affinity. Herein, from X-ray, NMR and DFT studies of azapeptoids, we have discovered a tetrel bonding interaction that stabilizes trans-peptoids. We show that peptoids having α-heteroatoms and N-aryl groups in the sidechain adopt trans-amide geometries due to the presence of a n /π →σ* tetrel bonding interaction between the sidechain α-heteroatom lone pair (n ) or π-electrons (π ) and the σ* orbital of the backbone C -N bond.
View Article and Find Full Text PDFPeptoids are oligomers of N-substituted glycine units. They structurally resemble peptides but, unlike natural peptides, the side chains of peptoids are present on the amide nitrogen atoms instead of the α-carbons. The N-substitution improves cell-permeability of peptoids and enhance their proteolytic stability over natural peptides.
View Article and Find Full Text PDFWe describe a novel mechanism of stabilization of the -ac isomer of an arylhydrazide n → π* interactions. We further show that when a leaving group (F) is present at the -position of the carbonyl group of such an arylhydrazide, the n → π* interaction facilitates an SAr autocyclization reaction to produce indazolone, an important heterocycle with biological activity. Faster autocyclization of arylhydrazide is observed when an electron withdrawing group is present in the aryl ring, which is a characteristic of SAr reactions.
View Article and Find Full Text PDFBiotechnol Rep (Amst)
December 2017
Lead released from manufacturing factories, recycling plants, automobile company and landfill leachate is abundantly found in wastewater. An efficient bioremediating agent for lead removal from wastewater is expected to ease the ever increasing problem. The present study reports sp.
View Article and Find Full Text PDFBacillus spp. and related genera native to soils of the pristine sacred groves from Meghalaya, India were characterized using biochemical and 16S rRNA gene analysis which revealed dominance of Bacillus, Paenibacillus, Lysinibacillus and Viridibacillus in the groves. Biochemical estimation was carried out for in vitro testing of plant growth promoting traits present in these isolates.
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