Publications by authors named "David Cubero"

With the threat of extinction looming over many species, the development of assisted reproduction techniques for use in conservation programmes is imperative. This work explores the feasibility and efficacy of artificial insemination in the capercaillie (Tetrao urogallus), a species in critical danger of extinction. Nine young, male birds were used as sperm donors for five young females.

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Understanding mortality causes is important for the conservation of endangered species, especially in small and isolated populations inhabiting anthropized landscapes where both natural and human-caused mortality may hinder the conservation of these species. We investigated the mortality causes of 53 free-ranging brown bears (Ursus arctos) found dead between 1998 and 2023 in the Cantabrian Mountains (northwestern Spain), a highly human-modified region where bears are currently recovering after being critically threatened in the last century. We detected natural traumatic injuries in 52.

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An exact expression for the average velocity of cold atoms in a driven, dissipative optical lattice in terms of the amplitudes of atomic density waves is derived from semiclassical equations for the phase space densities of the Zeeman ground-state sublevels. The calculations are for a J_{g}=1/2→J_{e}=3/2 transition, as it is customary in theoretical studies of Sisyphus cooling. While the driver, an additional beam of small amplitude, sets the atoms into directed motion, the new expression permits the quantification of the contribution to the atomic motion of a specific atomic wave, revealing unexpected counterpropagating contributions from many modes.

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The capercaillie Tetrao urogallus - the world's largest grouse- is a circumboreal forest species, which only two remaining populations in Spain: one in the Cantabrian mountains in the west and the other in the Pyrenees further east. Both have shown severe declines, especially in the Cantabrian population, which has recently been classified as "Critically Endangered". To develop management plans, information on demographic parameters is necessary to understand and forecast population dynamics.

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This work explores the possibility for improving heat transport in a polymeric, electrical insulating material, such as polyethylene, by adding boron nitride nanotubes - a heat superdiffusive material. We use molecular dynamics simulations to study the nanocomposites formed by addition of the nanotubes to both amorphous and crystalline polyethylene, and also investigate the effect of surface functionalization using a silane coupling agent, which, being covalently attached to both the nanofiller and the polymer matrix, facilitates the heat transport between them. Even though transport is shown to deteriorate in each simulation when the coupling agents are added, they are expected to favor the nucleation of the crystalline regions about the nanotubes, thus significantly boosting heat conduction in the material along their direction.

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This work extends the domain of vibrational mechanics to higher dimensions, with fast vibrations applied to different directions. In particular, the presented analysis considers the case of a split biharmonic drive, where harmonics of frequency ω and 2ω are applied to orthogonal directions in a two-dimensional setting. It is shown, both numerically and with analytic calculations, that this determines a highly tunable effective potential with the same symmetry as the original one.

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We study the surface states of an excess electron at polyethylene/vacuum interfaces using an accurate reaction-field method, specifically designed to take into account the long range interaction of the excess electron and the dielectric surface. The method is shown to validate the energy levels recently reported with a simple perturbation theory scheme, while providing a better description of the wave function at the vacuum. The use of a single particle pseudopotential allows the simulation of large interface samples, showing distinct differences between the electron surface states at amorphous and crystalline interfaces due to their different atomic density.

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The response of a linear system to an external perturbation is governed by the Fourier limit, with the inverse of the interaction time constituting a lower limit for the system bandwidth. This does not hold for nonlinear systems, which can thus exhibit sub-Fourier-behavior. The present Letter identifies a mechanism for sub-Fourier-sensitivity in driven quantum systems, which relies on avoided crossing between Floquet states.

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Pyotr Kapitza studied in 1951 the unusual equilibrium features of a rigid pendulum when its point of suspension is under a high-frequency vertical vibration. A sufficiently fast vibration makes the top position stable, putting the pendulum in an inverted orientation that seemingly defies gravity. Kapitza's analytical method, based on an asymptotic separation of fast and slow variables yielding a renormalized potential, has found application in many diverse areas.

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This work investigates the energy and spatial properties of excess electrons in polyethylene in bulk phases and, for the first time, at amorphous vacuum interfaces using a pseudopotential single-electron method (Lanczos diagonalisation) and density functional theory (DFT). DFT calculations are made employing two approaches: with pseudopotentials/plane waves and the local-density approximation; and with all-electron Gaussian basis functions at the B3LYP level of theory, supplemented with a lattice of ghost atoms. All three methods predict similar spatial localisation of the excess electron, but a reliable comparison of its energy can only be made between the Lanczos and DFT using Gaussian bases.

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The theoretical treatment of quasiperiodically driven quantum systems is complicated by the inapplicability of the Floquet theorem, which requires strict periodicity. In this work we consider a quantum system driven by a biharmonic driving and examine its asymptotic long-time limit, the limit in which features distinguishing systems with periodic and quasiperiodic driving occur. Also, in the classical case this limit is known to exhibit universal scaling, independent of the system details, with the system's reponse under quasiperiodic driving being described in terms of nearby periodically driven system results.

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The operation of Brownian motors is usually described in terms of out-of-equilibrium and symmetry-breaking settings, with the relevant spatiotemporal symmetries identified from the analysis of the equations of motion for the system at hand. When the appropriate conditions are satisfied, symmetry-related trajectories with opposite current are thought to balance each other, yielding suppression of transport. The direction of the current can be precisely controlled around these symmetry points by finely tuning the driving parameters.

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We analyze the relationship between irrationality and quasiperiodicity in nonlinear driven systems. To that purpose, we consider a nonlinear system whose steady-state response is very sensitive to the periodic or quasiperiodic character of the input signal. In the infinite time limit, an input signal consisting of two incommensurate frequencies will be recognized by the system as quasiperiodic.

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We examine the time-dependent behavior of a nonlinear system driven by a two-frequency forcing. By using a nonperturbative approach, we are able to derive an asymptotic expression, valid in the long-time limit, for the time average of the output variable which describes the response of the system. We identify several universal features of the asymptotic response of the system, which are independent of the details of the model.

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We report fully relativistic molecular-dynamics simulations that verify the appearance of thermal equilibrium of a classical gas inside a uniformly accelerated container. The numerical experiments confirm that the local momentum distribution in this system is very well approximated by the Jüttner function-originally derived for a flat spacetime-via the Tolman-Ehrenfest effect. Moreover, it is shown that when the acceleration or the container size is large enough, the global momentum distribution can be described by the so-called modified Jüttner function, which was initially proposed as an alternative to the Jüttner function.

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We consider the problem of the control of transport in higher-dimensional periodic structures by applied ac fields. In a generic crystal, transverse degrees of freedom are coupled, and this makes the control of motion difficult to implement. We show, both with simulations and with an analytical functional expansion on the driving amplitudes, that the use of quasiperiodic driving significantly suppresses the coupling between transverse degrees of freedom.

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By applying a staggered driving force in a prototypical discrete model with a quartic nonlinearity, we demonstrate the spontaneous formation and destruction of discrete breathers with a selected frequency due to thermal fluctuations. The phenomenon exhibits the striking features of stochastic resonance: a nonmonotonic behavior as noise is increased and breather generation under subthreshold conditions. The corresponding peak is associated with a matching between the external driving frequency and the breather frequency at the average energy given by ambient temperature.

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The dynamics of a system formed by a finite number N of globally coupled bistable oscillators and driven by external forces is studied focusing on a global variable defined as the arithmetic mean of each oscillator variable. Several models based on truncation schemes of a hierarchy of stochastic equations for a set of fluctuating cumulant variables are presented. This hierarchy is derived using Itô stochastic calculus, and the noise terms in it are treated using an asymptotic approximation valid for large N .

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There is an intense debate in the recent literature about the correct generalization of Maxwell's velocity distribution in special relativity. The most frequently discussed candidate distributions include the Jüttner function as well as modifications thereof. Here we report results from fully relativistic one-dimensional molecular dynamics simulations that resolve the ambiguity.

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We study the phenomenon of nonlinear stochastic resonance (SR) in a complex noisy system formed by a finite number of interacting subunits driven by rectangular pulsed time periodic forces. We find that very large SR gains are obtained for subthreshold driving forces with frequencies much larger than the values observed in simpler one-dimensional systems. These effects are explained using simple considerations.

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The effect of a high-frequency signal on the FitzHugh-Nagumo excitable model is analyzed. We show that the firing rate is diminished as the ratio of the high-frequency amplitude to its frequency is increased. Moreover, it is demonstrated that the excitable character of the system, and consequently the firing activity, is suppressed for ratios above a given threshold value.

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We show that the Markovian approximation assumed in current particle-based coarse-grained techniques, like dissipative particle dynamics, is unreliable in situations in which sound plays an important role. As an example we solve analytically and numerically the dynamics of coarse-grained harmonic systems by using first principle methods, showing the presence of long-lived memory kernels. This effect raises questions about the connection of these approaches at their current form to molecular dynamics.

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We use projection operators to address the coarse-grained multiscale problem in harmonic systems. Stochastic equations of motion for the coarse-grained variables, with an inhomogeneous level of coarse graining in both time and space, are presented. In contrast to previous approaches that typically start with thermodynamic averages, the key element of our approach is the use of a projection matrix chosen both for its physical appeal in analogy to mechanical stability theory and for its algebraic properties.

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We use a simple mean field scheme to compute the polarization energy of an excess electron in amorphous polyethylene that allows us to study dynamical properties. Nonadiabatic simulations of an excess electron in amorphous polyethylene at room temperature show the spontaneous formation of localized small polaron states in which the electron is confined in a spherically shaped region with a typical dimension of 5 A. We compute the self-trapping energy to be -0.

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