Publications by authors named "David Coomes"

Artificial Intelligence (AI) is an emerging tool that could be leveraged to identify the effective conservation solutions demanded by the urgent biodiversity crisis. We present the results of our horizon scan of AI applications likely to significantly benefit biological conservation. An international panel of conservation scientists and AI experts identified 21 key ideas.

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Tropical cyclones (TCs) sporadically cause extensive damage to forests. However, little is known about how TCs affect forest dynamics in mountainous terrain, due to difficulties in modelling wind flows and quantifying structural changes. Typhoon Mangkhut (2018) was the strongest TC to strike Hong Kong in over 40 yr, with gusts > 250 km h.

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Tree growth-survival relationships link two demographic processes that individually dictate the composition, structure and functioning of forest ecosystems. While these relationships vary intra-specifically, it remains unclear how this reflects environmental variation and disturbance. We examined the influence of a 700-m elevation gradient and an  = 6.

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Article Synopsis
  • * Analysis of data from over 1 million forest plots and thousands of tree species shows that wood density varies significantly by latitude, being up to 30% denser in tropical forests compared to boreal forests, and is influenced mainly by temperature and soil moisture.
  • * The research also finds that disturbances like human activity and fire alter wood density at local levels, affecting forest carbon stock estimates by up to 21%, emphasizing the importance of understanding environmental impacts on forest ecosystems.
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In tropical forests, trees strategically balance growth patterns to optimise fitness amid multiple environmental stressors. Wind poses the primary risk to a tree's mechanical stability, prompting developments such as thicker trunks to withstand the bending forces. Therefore, a trade-off in resource allocation exists between diameter growth and vertical growth to compete for light.

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Background: Validated biomarkers could catalyze environmental enteric dysfunction (EED) research.

Objectives: Leveraging an EED histology scoring system, this multicountry analysis examined biomarker associations with duodenal histology features among children with EED. We also examined differences in 2-h compared with 1-h urine collections in the lactulose rhamnose (LR) dual sugar test.

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Background: Environmental enteric dysfunction (EED) is an inflammatory condition of the small intestine that is prevalent in children residing in low- and middle-income countries. EED is accompanied by profound histopathologic changes in the small bowel, loss of absorptive capacity, increased intestinal permeability, increased microbial translocation, and nutrient loss.

Objectives: We sought to identify dysregulated genes and pathways that might underlie pediatric EED.

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Article Synopsis
  • Environmental enteric dysfunction (EED) is a silent intestinal disorder linked to various health issues in children, notably affecting growth and neurodevelopment.
  • Researchers aimed to create a scoring system based on duodenal biopsies from children with EED in Bangladesh, Pakistan, and Zambia, comparing them to healthy children and those with celiac disease.
  • The study revealed five key histopathological features that distinguished EED from normal biopsies, with a high accuracy in identifying EED (AUC: 0.992), highlighting geographical differences in goblet cell depletion among the affected populations.
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  • The study investigates how disturbance rates and tree growth in tropical forests will be impacted by climate change, focusing on how these factors interact over time.
  • Using airborne LiDAR technology, researchers analyzed changes in canopy height across 8000 hectares of old-growth tropical forests over 4-5 years, comparing sites in Borneo, the eastern Amazon, and the Guiana shield.
  • Findings indicate that while the eastern Amazon and Guiana shield forests maintained stable canopy heights, Borneo experienced a decline due to more frequent small-scale disturbances, suggesting taller trees are more vulnerable and may face greater threats from extreme weather linked to climate change.
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Merkel cell carcinoma (MCC) is a rare and aggressive neuroendocrine tumor of the skin. Risk factors include extensive sun damage, infection with Merkel cell polyomavirus, and an immunocompromised state. PRAME, also known as preferentially expressed antigen in melanoma, is a cancer-testis antigen recently found to be a useful diagnostic tool in the workup of melanocytic neoplasms.

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Background: Environmental enteric dysfunction (EED), a chronic inflammatory condition of the small intestine, is an important driver of childhood malnutrition globally. Quantifying intestinal morphology in EED allows for exploration of its association with functional and disease outcomes.

Objectives: We sought to define morphometric characteristics of childhood EED and determine whether morphology features were associated with disease pathophysiology.

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Trees structure the Earth's most biodiverse ecosystem, tropical forests. The vast number of tree species presents a formidable challenge to understanding these forests, including their response to environmental change, as very little is known about most tropical tree species. A focus on the common species may circumvent this challenge.

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Forests are a substantial terrestrial carbon sink, but anthropogenic changes in land use and climate have considerably reduced the scale of this system. Remote-sensing estimates to quantify carbon losses from global forests are characterized by considerable uncertainty and we lack a comprehensive ground-sourced evaluation to benchmark these estimates. Here we combine several ground-sourced and satellite-derived approaches to evaluate the scale of the global forest carbon potential outside agricultural and urban lands.

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Understanding what controls global leaf type variation in trees is crucial for comprehending their role in terrestrial ecosystems, including carbon, water and nutrient dynamics. Yet our understanding of the factors influencing forest leaf types remains incomplete, leaving us uncertain about the global proportions of needle-leaved, broadleaved, evergreen and deciduous trees. To address these gaps, we conducted a global, ground-sourced assessment of forest leaf-type variation by integrating forest inventory data with comprehensive leaf form (broadleaf vs needle-leaf) and habit (evergreen vs deciduous) records.

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Determining the drivers of non-native plant invasions is critical for managing native ecosystems and limiting the spread of invasive species. Tree invasions in particular have been relatively overlooked, even though they have the potential to transform ecosystems and economies. Here, leveraging global tree databases, we explore how the phylogenetic and functional diversity of native tree communities, human pressure and the environment influence the establishment of non-native tree species and the subsequent invasion severity.

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The United Nations recently agreed to major expansions of global protected areas (PAs) to slow biodiversity declines. However, although reserves often reduce habitat loss, their efficacy at preserving animal diversity and their influence on biodiversity in surrounding unprotected areas remain unclear. Unregulated hunting can empty PAs of large animals, illegal tree felling can degrade habitat quality, and parks can simply displace disturbances such as logging and hunting to unprotected areas of the landscape (a phenomenon called leakage).

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Although eco-acoustic monitoring has the potential to deliver biodiversity insight on vast scales, existing analytical approaches behave unpredictably across studies. We collated 8,023 audio recordings with paired manual avifaunal point counts to investigate whether soundscapes could be used to monitor biodiversity across diverse ecosystems. We found that neither univariate indices nor machine learning models were predictive of species richness across datasets but soundscape change was consistently indicative of community change.

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Here we provide the 'Global Spectrum of Plant Form and Function Dataset', containing species mean values for six vascular plant traits. Together, these traits -plant height, stem specific density, leaf area, leaf mass per area, leaf nitrogen content per dry mass, and diaspore (seed or spore) mass - define the primary axes of variation in plant form and function. The dataset is based on ca.

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