Publications by authors named "David Chavalarias"

This research conducts an audit of Twitter's recommender system, aiming to examine the disparities between users' curated timelines and their subscription choices. Through the combined use of a browser extension and data collection via the Twitter API, our investigation reveals a high amplification of friends from the same community, a preference for amplifying emotionally charged and toxic tweets and an uneven algorithmic amplification across friends' political leaning. This audit emphasizes the importance of transparency, and increased awareness regarding the impact of algorithmic curation.

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Objectives: To visualize the evolution of all registered COVID-19 vaccine trials.

Study Design And Setting: As part of the living mapping of the COVID-NMA initiative, we identify biweekly all COVID-19 vaccine trials and automatically extract data from the EU clinical trials registry, ClinicalTrials.gov, IRCT and the World Health Organization International Clinical Trials Registry Platform.

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Unlabelled: In 1751, Jean le Rond d'Alembert had a dream: "to make a genealogical or encyclopedic tree which will gather the various branches of knowledge together under a single point of view and will serve to indicate their origin and their relationships to one another". In this paper, we address the question identifying the branches of science by taking advantage of the massive digitization of scientific production. In the framework of complex systems studies, we first formalize the notion of level and scale of knowledge dynamics.

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Traceability is key to ensure food quality and safety from farm to fork, yet high implementation costs and the complexity of the food supply chain pose challenges to its operation. Here we propose a mobile-based bidirectional tracing system for food products that integrates graph data and peer-to-peer architecture. Our system allows data synchronization to happen seamlessly between all connected nodes, as data are gathered through market transactions and all related product information is concatenated by scanning 2D product barcodes.

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A few billion years have passed since the first life forms appeared. Since then, life has continued to forge complex associations between the different emergent levels of interconnection it forms. The advances of recent decades in molecular chemistry and theoretical biology, which have embraced complex systems approaches, now make it possible to conceptualize the questions of the origins of life and its increasing complexity from three complementary notions of closure: processes closure, autocatalytic closure and constraints closure.

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Background: Digital spaces, and in particular social networking sites, are becoming increasingly present and influential in the functioning of our democracies. In this paper, we propose an integrated methodology for the data collection, the reconstruction, the analysis and the visualization of the development of a country's political landscape from Twitter data.

Method: The proposed method relies solely on the interactions between Twitter accounts and is independent of the characteristics of the shared contents such as the language of the tweets.

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Importance: The use and misuse of P values has generated extensive debates.

Objective: To evaluate in large scale the P values reported in the abstracts and full text of biomedical research articles over the past 25 years and determine how frequently statistical information is presented in ways other than P values.

Design: Automated text-mining analysis was performed to extract data on P values reported in 12,821,790 MEDLINE abstracts and in 843,884 abstracts and full-text articles in PubMed Central (PMC) from 1990 to 2015.

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We introduce an automated method for the bottom-up reconstruction of the cognitive evolution of science, based on big-data issued from digital libraries, and modeled as lineage relationships between scientific fields. We refer to these dynamic structures as phylomemetic networks or phylomemies, by analogy with biological evolution; and we show that they exhibit strong regularities, with clearly identifiable phylomemetic patterns. Some structural properties of the scientific fields - in particular their density -, which are defined independently of the phylomemy reconstruction, are clearly correlated with their status and their fate in the phylomemy (like their age or their short term survival).

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Objective: Many different types of bias have been described. Some biases may tend to coexist or be associated with specific research settings, fields, and types of studies. We aimed to map systematically the terminology of bias across biomedical research.

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