Publications by authors named "Dave J Clarke"

The order Coleoptera (beetles) is arguably the most speciose group of animals, but the evolutionary history of beetles, including the impacts of plant feeding (herbivory) on beetle diversification, remain poorly understood. We inferred the phylogeny of beetles using 4,818 genes for 146 species, estimated timing and rates of beetle diversification using 89 genes for 521 species representing all major lineages and traced the evolution of beetle genes enabling symbiont-independent digestion of lignocellulose using 154 genomes or transcriptomes. Phylogenomic analyses of these uniquely comprehensive datasets resolved previously controversial beetle relationships, dated the origin of Coleoptera to the Carboniferous, and supported the codiversification of beetles and angiosperms.

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Mexico has the third highest diversity of passalid beetles in the World. Here we describe , a new monotypic genus, potentially endemic to the mountains of central Mexico. The new genus is diagnosed by a new configuration of characters from the mesofrontal structure (MFS) in addition to other characters.

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Cai et al. report specialized prey-capture structures in two species of the stenine rove beetles from mid-Cretaceous Burmese amber. The discovery provides critical information about the origin and early evolution of both the novel predatory structure and of the subfamily Steninae (Coleoptera: Staphylinidae).

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The phylogeny and evolution of weevils (the beetle superfamily Curculionoidea) has been extensively studied, but many relationships, especially in the large family Curculionidae (true weevils; > 50,000 species), remain uncertain. We used phylogenomic methods to obtain DNA sequences from 522 protein-coding genes for representatives of all families of weevils and all subfamilies of Curculionidae. Most of our phylogenomic results had strong statistical support, and the inferred relationships were generally congruent with those reported in previous studies, but with some interesting exceptions.

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The aphid tribe Macrosiphini Wilson, 1910 (Hemiptera: Aphididae: Aphidinae) is one of the most controversial groups within Aphididae. We sequenced 2876 bp from one nuclear gene (EF-1α) and four mitochondrial genes (COI, tRNA + COII, 16S) from 107 terminal taxa representing 57 genera of Macrosiphini s.l.

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Article Synopsis
  • Researchers explored the genomic basis of wood-feeding in the Asian longhorned beetle, a major invasive species, through genome sequencing, gene expression studies, and enzyme analyses.
  • The study found that this beetle has a unique set of enzymes that enables it to degrade plant cell walls and detoxify chemicals, contributing to its ability to feed on various woody plants.
  • It was concluded that the expansion and specialization of certain genes, including those acquired from fungi and bacteria, play a crucial role in the evolutionary success of wood-feeding beetles and their ability to adapt to different plant species.
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