Publications by authors named "Daniel Hatlem"

Article Synopsis
  • Poly-proline II helices are special shapes found in proteins that help them interact with other molecules, making them flexible and often misinterpreted.
  • Scientists discovered that a protein called YadA from a germ called Yersinia enterocolitica has a poly-proline II helix that helps it stick to a substance called heparin.
  • The YadA protein needs specific parts to connect with heparin, and if host cells can’t produce heparin properly, they aren’t affected by YadA, which may help the germ cause disease in certain situations.
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α-helical coiled-coils are ubiquitous protein structures in all living organisms. For decades, modified coiled-coils sequences have been used in biotechnology, vaccine development, and biochemical research to induce protein oligomerization, and form self-assembled protein scaffolds. A prominent model for the versatility of coiled-coil sequences is a peptide derived from the yeast transcription factor, GCN4.

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The SpyCatcher-SpyTag system was developed seven years ago as a method for protein ligation. It is based on a modified domain from a surface protein (SpyCatcher), which recognizes a cognate 13-amino-acid peptide (SpyTag). Upon recognition, the two form a covalent isopeptide bond between the side chains of a lysine in SpyCatcher and an aspartate in SpyTag.

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Trimeric autotransporter adhesins (TAAs) are a subset of a larger protein family called the type V secretion systems. They are localized on the cell surface of Gram-negative bacteria, function as mediators of attachment to inorganic surfaces and host cells, and thus include important virulence factors. Yersinia adhesin A (YadA) from Yersinia enterocolitica is a prototypical TAA that is used extensively to study the structure and function of the type Vc secretion system.

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The major virulence factor of enterotoxigenic Escherichia coli is the heat-labile enterotoxin (LT), an AB toxin closely related to the cholera toxin. LT consists of six subunits, the catalytically active A-subunit and five B-subunits arranged as a pentameric ring (LTB), which enable the toxin to bind to the epithelial cells in the intestinal lumen. LTB has two recognized binding sites; the primary binding site is responsible for anchoring the toxin to its main receptor, the GM-ganglioside, while the secondary binding site recognizes blood group antigens.

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