Publications by authors named "Daniel C Lim"

Eukaryotic innate immune systems use pattern recognition receptors to sense infection by detecting pathogen-associated molecular patterns, which then triggers an immune response. Bacteria have similarly evolved immunity proteins that sense certain components of their viral predators, known as bacteriophages. Although different immunity proteins can recognize different phage-encoded triggers, individual bacterial immunity proteins have been found to sense only a single trigger during infection, suggesting a one-to-one relationship between bacterial pattern recognition receptors and their ligands.

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Article Synopsis
  • Neutralizing antibody (NAb) titer is crucial for measuring protection against SARS-CoV-2 infection, but current testing methods are not widely accessible.
  • A new lateral flow assay has been developed that measures the amount of neutralized SARS-CoV-2 receptor-binding domain (RBD) that no longer binds to ACE2, showing a strong correlation with NAb titer from vaccinated and recovered patients.
  • This testing method outperforms existing techniques and could potentially be used for large-scale assessments of immunity in the population, making it easier for individuals to check their NAb titer at home.
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The polo-box domain (PBD) of Plk1 is a promising target for cancer therapeutics. We designed and synthesized novel phosphorylated macrocyclic peptidomimetics targeting PBD based on acyclic phosphopeptide PMQSpTPL. The inhibitory activities of on Plk1-PBD is >30-fold higher than those of PMQSpTPL.

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Cell-cycle dependent redox changes result in increased protein oxidation in mitotic cells. We show that oxidative modifications of a conserved cysteine residue within Aurora A kinase (AURKA) can promote its activation during mitosis. Targeting redox-sensitive cysteine residues within AURKA may lead to the development of novel anti-cancer agents with improved clinical efficacy.

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Cell cycle-dependent redox changes can mediate transient covalent modifications of cysteine thiols to modulate the activities of regulatory kinases and phosphatases. Our previously reported finding that protein cysteine oxidation is increased during mitosis relative to other cell cycle phases suggests that redox modifications could play prominent roles in regulating mitotic processes. The Aurora family of kinases and their downstream targets are key components of the cellular machinery that ensures the proper execution of mitosis and the accurate segregation of chromosomes to daughter cells.

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  • Cancer cells show varying levels of reactive oxygen species (ROS) throughout the cell cycle, peaking during mitosis.
  • During mitosis, there is an accumulation of oxidized biomolecules, particularly in protein cysteine residues.
  • Prolonged mitotic arrest leads to higher ROS levels and more oxidative damage, which may improve the effectiveness of ROS-based anticancer treatments.
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Some apicomplexan parasites have evolved distinct protein kinase families to modulate host cell structure and function. Toxoplasma gondii rhoptry protein kinases and pseudokinases are involved in virulence and modulation of host cell signalling. The proteome of Plasmodium falciparum contains a family of putative kinases called FIKKs, some of which are exported to the host red blood cell and might play a role in erythrocyte remodelling.

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Beta-lactamase inhibitory protein (BLIP) binds a variety of beta-lactamase enzymes with wide-ranging specificity. Its binding mechanism and interface interactions are a well-established model system for the characterization of protein-protein interactions. Published studies have examined the binding of BLIP to diverse target beta-lactamases (e.

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