Publications by authors named "Da Lin"

Brain tumors are one of the major health threats to humans, and their complex pathological features and anatomical structures make accurate segmentation and detection crucial. However, existing models based on Transformers and Convolutional Neural Networks (CNNs) still have limitations in medical image processing. While Transformers are proficient in capturing global features, they suffer from high computational complexity and require large amounts of data for training.

View Article and Find Full Text PDF

Objective: Despite the identification of various prognostic factors for anaplastic thyroid carcinoma (ATC) patients over the years, a precise prognostic tool for these patients is still lacking. This study aimed to develop and validate a prognostic model for predicting survival outcomes for ATC patients using random survival forests (RSF), a machine learning algorithm.

Methods: A total of 1222 ATC patients were extracted from the Surveillance, Epidemiology, and End Results (SEER) database and randomly divided into a training set of 855 patients and a validation set of 367 patients.

View Article and Find Full Text PDF

Non-fused electron acceptors have obtained increasing curiosity in organic solar cells (OSCs) thanks to simple synthetic route and versatile chemical modification capabilities. However, non-fused acceptors with varying quinoxaline core and as-cast device have rarely been explored, and the molecular structure-photovoltaic performance relationship of such acceptors remains unclear. Herein, two non-fused acceptors L19 and L21 with thienyl substituted non-fluorinated/fluorinated quinoxaline core were developed via five-step synthesis.

View Article and Find Full Text PDF

Pesticide application is essential for stabilizing agricultural production. However, the effects of increasing pesticide diversity on soil microbial functions remain unclear, particularly under varying nitrogen (N) fertilizer management practices. In this study, we investigated the stochasticity of soil microbes and multitrophic networks through amplicon sequencing, assessed soil community functions related to carbon (C), N, phosphorus (P), and sulfur (S) cycling, and characterized the dominant bacterial life history strategies via metagenomics along a gradient of increasing pesticide diversity under two N addition levels.

View Article and Find Full Text PDF

The advent of ionotronics has revealed significant potential in flexible transistors, energy harvesting, and unconventional circuits. However, most ionotronic devices, often centered around synthetic polymers, involve complex grafting or synthesis that raise legitimate concerns about their environmental sustainability. Herein, a simple yet versatile approach for developing single-composition ionotronic devices using wool keratin (WK), a biodegradable and pH-responsive natural polymer is presented.

View Article and Find Full Text PDF

Microbial interactions form microfood webs, crucial for ecological functions. The steady state of these webs, shaped by cooperation and competition among trophic levels, prevents pathogen proliferation and invasion, maintaining soil health. Combined pollutants pose a widespread environmental issue, exerting significant pressure on microfood webs.

View Article and Find Full Text PDF

Microplastic is globally regarded as an important factor impacting biogeochemical cycles, yet our understanding of such influences is limited by the uncertainties of intricate microbial processes. By multiomics analysis, coupled with soil chemodiversity characterization and microbial carbon use efficiency (CUE), we investigated how microbial responses to microplastics impacted soil carbon cycling in a long-term field experiment. We showed that biodegradable microplastics promoted soil organic carbon accrual by an average of 2.

View Article and Find Full Text PDF

Broadband absorption in the visible spectrum is essential in optoelectronic applications that involve power conversion such as photovoltaics and photocatalysis. Most ultrathin broadband absorbers use parasitic plasmonic structures that maximize absorption using surface plasmons and/or Fabry-Perot cavities, which limits the weight efficiency of the device. Here, we show the theoretical and experimental realization of an unpatterned/planar semiconductor thin-film absorber based on monolayer transition-metal dichalcogenides.

View Article and Find Full Text PDF
Article Synopsis
  • This study analyzes the early and mid-stages of Alzheimer's disease by profiling gene and protein expressions in a human APP knock-in model to understand how amyloid-beta (Aβ) affects brain cells.
  • It explores the role of TREM2, a gene linked to Alzheimer's risk, by comparing its effects in App mice with TREM2 knockout models, emphasizing how TREM2 influences microglial responses to Aβ.
  • The findings reveal that Aβ deposition leads to changes in microglial activation, energy metabolism, and protein synthesis, indicating potential therapeutic targets for Alzheimer's disease by addressing these molecular mechanisms.
View Article and Find Full Text PDF

Antibiotic resistance risk in the aquaculture industry is increasing with the excessive consumption of antibiotics. Although various efficient technologies for the degradation of antibiotics are available, the potential risk from antibiotic resistance in treated waters is often overlooked. This study compared the risks of antibiotic resistance in anaerobic sludge fed with pretreated florfenicol (FLO) containing wastewater after four UV or vacuum UV (VUV)-driven ((V)UV-driven) pretreatments, and established the VUV/sulfite recirculating water system to validate the effect of controlling the antibiotic resistance risk in the actual aquaculture water.

View Article and Find Full Text PDF

Brain tumors are diseases characterized by abnormal cell growth within or around brain tissues, including various types such as benign and malignant tumors. However, there is currently a lack of early detection and precise localization of brain tumors in MRI images, posing challenges to diagnosis and treatment. In this context, achieving accurate target detection of brain tumors in MRI images becomes particularly important as it can improve the timeliness of diagnosis and the effectiveness of treatment.

View Article and Find Full Text PDF

Eukaryotic microbes play key ecological roles in riverine ecosystems. Amplicon sequencing has greatly facilitated the identification and characterization of eukaryotic microbial communities. Currently, 18S rRNA gene V4 and V9 hypervariable regions are widely used for sequencing eukaryotic microbes.

View Article and Find Full Text PDF

Background: Age-related Macular Degeneration (AMD) poses a growing global health concern as the leading cause of central vision loss in elderly people.

Objection: This study focuses on unraveling the intricate involvement of Natural Killer (NK) cells in AMD, shedding light on their immune responses and cytokine regulatory roles.

Methods: Transcriptomic data from the Gene Expression Omnibus database were utilized, employing single-cell RNA-seq analysis.

View Article and Find Full Text PDF
Article Synopsis
  • Antibiotic resistance in plant-associated microbiomes is a growing threat to agriculture and human health, influenced by the genetic makeup of the plants themselves.
  • A study of 16 wheat cultivars found that different wheat genotypes significantly affected the levels of antibiotic resistance genes (ARGs) in their associated microbiomes, particularly with higher levels of Pseudomonas bacteria linked to ARG proliferation.
  • Furthermore, the research highlighted that specific leaf metabolites, like DIMBOA-Glc, can enhance the presence of Pseudomonas spp. and their ARGs, indicating that genetic variations in plants can lead to specialized microbial communities that may exacerbate antibiotic resistance.
View Article and Find Full Text PDF

Earthworms are critical in regulating soil processes and act as filters for antibiotic resistance genes (ARGs). Yet, the geographic patterns and main drivers of earthworm gut ARGs remain largely unknown. We collected 52 earthworm and soil samples from arable and forest ecosystems along a 3000 km transect across China, analyzing the diversity and abundance of ARGs using shotgun metagenomics.

View Article and Find Full Text PDF
Article Synopsis
  • - This study focuses on T-cell receptor (TCR) detection to assess T-cell immune responses in glioma, using DNA-based high-throughput sequencing for better disease prediction with fewer biomarkers.
  • - Researchers analyzed 602 TCR sequences and established a multidimensional classification system, achieving a high classification accuracy of 96.67% using a reduced set of three significant TCR sequences.
  • - The findings suggest that the identified TCR sequences could be valuable for diagnosing and treating glioma and potentially other cancers, offering a novel approach in cancer research.
View Article and Find Full Text PDF

Aberrant increase of arachidonic acid (ARA) has long been implicated in the pathology of Alzheimer's disease (AD), while the underlying causal mechanism remains unclear. In this study, we revealed a link between ARA mobilization and microglial dysfunction in Aβ pathology. Lipidomic analysis of primary microglia from App mice showed a marked increase in free ARA and lysophospholipids (LPLs) along with a decrease in ARA-containing phospholipids, suggesting increased ARA release from phospholipids (PLs).

View Article and Find Full Text PDF
Article Synopsis
  • Fermentation broth from fruit and vegetable waste (FFVW) effectively reduces antibiotic resistance genes (ARGs) and human bacterial pathogens (HBPs) associated with human health.
  • Metagenomic analysis indicated significant reductions in harmful bacteria like Klebsiella pneumoniae and Mycobacterium tuberculosis due to FFVW treatment.
  • The mechanism involves the inhibition of quorum sensing (QS) in bacteria, leading to decreased expression of genes related to virulence factors (VFGs) and ARGs, promoting a safer environment for soil and human health.
View Article and Find Full Text PDF

Technology for spatial multi-omics aids the discovery of new insights into cellular functions and disease mechanisms. Here we report the development and applicability of multi-omics in situ pairwise sequencing (MiP-seq), a method for the simultaneous detection of DNAs, RNAs, proteins and biomolecules at subcellular resolution. Compared with other in situ sequencing methods, MiP-seq enhances decoding capacity and reduces sequencing and imaging costs while maintaining the efficacy of detection of gene mutations, allele-specific expression and RNA modifications.

View Article and Find Full Text PDF
Article Synopsis
  • HPV is linked to various cancers, but the exact mechanisms behind its interaction with host cells' genetics are not fully understood.
  • Researchers used advanced mapping techniques to study how HPV interacts with the host's chromatin and identified the transcription factor Sp1 as a crucial player in these interactions.
  • Targeting Sp1 can not only reduce oncogene activity related to HPV but also enhance immune responses, suggesting that Sp1 inhibition could be a potential treatment strategy for HPV-related cancers, especially in cervical cancer patients.
View Article and Find Full Text PDF
Article Synopsis
  • The study investigates the role of Caveolin-1 (Cav1), Caveolin-2 (Cav2), and Cavin-1 in psoriasis vulgaris and its subtypes by analyzing skin biopsy samples.
  • Researchers found that Cav1 is generally downregulated across all types of psoriasis, with nail, plaque, and palmoplantar psoriasis showing the most significant reductions.
  • The findings suggest that Cav1 may serve as a universal biomarker for psoriasis, while Cav2 and Cavin-1 show specific downregulation mainly in nail and pustular psoriasis, indicating potential targets for treatment.
View Article and Find Full Text PDF

DNA methylases of the restriction-modifications (R-M) systems are promising enzymes for the development of novel molecular and synthetic biology tools. Their use in vitro enables the deployment of independent and controlled catalytic reactions. This work aimed to produce recombinant DNA methylases belonging to the R-M systems, capable of in vitro inhibition of the type IIS restriction enzymes BsaI, BpiI, or LguI.

View Article and Find Full Text PDF
Article Synopsis
  • Microplastics are tiny pieces of plastic that are causing big problems for the environment, especially in places called "plastispheres," where they can store bad bacteria and germs.
  • A study buried nylon bags full of these microplastics in farmland to see how long-term use of organic fertilizers affected the spread of harmful genes in the soil.
  • The results showed that using organic fertilizers increased the amount of bad genes in the soil and made it easier for germs to spread, which could be a health risk for humans.
View Article and Find Full Text PDF

The coexistence of antibiotic resistance genes (ARGs), mobile genetic elements (MGEs), and virulence factor genes (VFGs) in human bacterial pathogens (HBPs) increases their risks to ecological security and human health and no effective strategy is available. Herein, we demonstrated two typical quorum sensing (QS) interfering agents, 4-nitropyridine-N-oxide (4-NPO, a QS inhibitor) and Acylase Ⅰ (a quorum quenching (QQ) enzyme), effectively decreased the abundance of HBPs by 48.30% and 72.

View Article and Find Full Text PDF