Publications by authors named "D Chicco"

Article Synopsis
  • Over the last 20 years, studies using large cancer datasets like The Cancer Genome Atlas have aimed to improve precision medicine but face challenges from inconsistent gene signatures across different groups of patients.
  • The complexities of the transcriptome and issues with reproducibility hinder the effectiveness of current gene signatures, influenced by various sequencing technologies and data analysis approaches.
  • To tackle these problems, the article suggests that improved experimental designs, the use of machine learning, and standardized practices could enhance the reliability of gene signatures in cancer research.
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The electrocardiogram (ECG) is a powerful tool to measure the electrical activity of the heart, and the analysis of its data can be useful to assess the patient's health. In particular, the computational analysis of electrocardiogram data, also called ECG signal processing, can reveal specific patterns or heart cycle trends which otherwise would be unnoticeable by medical experts. When performing ECG signal processing, however, it is easy to make mistakes and generate inflated, overoptimistic, or misleading results, which can lead to wrong diagnoses or prognoses and, in turn, could even contribute to bad medical decisions, damaging the health of the patient.

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Electroencephalography (EEG) is a medical engineering technique aimed at recording the electric activity of the human brain. Brain signals derived from an EEG device can be processed and analyzed through computers by using digital signal processing, computational statistics, and machine learning techniques, that can lead to scientifically-relevant results and outcomes about how the brain works. In the last decades, the spread of EEG devices and the higher availability of EEG data, of computational resources, and of software packages for electroencephalography analysis has made EEG signal processing easier and faster to perform for any researcher worldwide.

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Pangenomics is a relatively new scientific field which investigates the union of all the genomes of a clade. The word pan means everything in ancient Greek; the term pangenomics originally regarded genomes of bacteria and was later intended to refer to human genomes as well. Modern bioinformatics offers several tools to analyze pangenomics data, paving the way to an emerging field that we can call computational pangenomics.

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Congenital long QT syndrome (LQTS) represents a disorder of myocardial repolarization characterized by a prolongation of QTc interval on ECG, which can degenerate into fast polymorphic ventricular arrhythmias. The typical symptoms of LQTS are syncope and palpitations, mainly triggered by adrenergic stimuli, but it can also manifest with cardiac arrest. At least 17 genotypes have been associated with LQTS, with a specific genotype-phenotype relationship described for the three most common subtypes (LQTS1, -2, and -3).

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