Winter thermohaline evolution along and below the Ross Ice Shelf.

The Ross Ice Shelf floats above the southern sector of the Ross Sea and creates a cavity where critical ocean-ice interactions take place. Crucial processes occurring in this cavity include the formation of Ice Shelf Water, the coldest ocean water, and the intrusion of Antarctic Surface Water, the main driver of frontal and basal melting. During the winter, a polynya forms along the Ross Ice Shelf edge, producing a precursor to Antarctic Bottom Water known as High Salinity Shelf Water.

Hypoxia extreme events in a changing climate: Machine learning methods and deterministic simulations for future scenarios development in the Venice Lagoon.

Climate change pressures include the dissolved oxygen decline that in lagoon ecosystems can lead to hypoxia, i.e. low dissolved oxygen concentrations, which have consequences to ecosystem functioning including biogeochemical cycling from mild to severe disruption.

Downscaled and bias-corrected bioclimatic dataset for the Mediterranean Sea (2005-2099).

This dataset provides annual statistical descriptors (mean, minimum, maximum, range and standard deviation) of key biogeochemical and physical variables for the Mediterranean Sea. It covers the period 2005-2099 under a high emissions scenario (CMIP5-RCP8.5), with a spatial resolution of 1/24 degree (∼4 km²).

Mercury cycling in contaminated coastal environments: modeling the benthic-pelagic coupling and microbial resistance in the Venice Lagoon.

Anthropogenic activities have been releasing mercury for centuries, and despite global efforts to control emissions, concentrations in environmental media remain high. Coastal sediments can be a long-term repository for mercury, but also a secondary source, and competing processes in marine ecosystems can lead to the conversion of mercury into the toxic and bioaccumulative species methylmercury, which threatens ecosystem and human health. We investigate the fate and transport of three mercury species in a coastal lagoon affected by historical pollution using a novel high-resolution finite element model that integrates mercury biogeochemistry, sediment dynamics and hydrodynamics.

A case study of impacts of an extreme weather system on the Mediterranean Sea circulation features: Medicane Apollo (2021).

The attention of the scientific community, policymakers, and public opinion on the Medicanes has recently grown because of their increase in intensity and harmful potential. Although Medicanes may be influenced by pre-existing upper-ocean conditions, uncertainties remain about how such weather extremes influence ocean circulation. This work examines a condition that has been never described before in the Mediterranean, which involves the interplay between an atmospheric cyclone (Medicane Apollo-October 2021) and a cyclonic gyre located in the western Ionian Sea.

Effects of solar irradiance noise on a complex marine trophic web.

The analysis of experimental data of the solar irradiance, collected on the marine surface, clearly highlights the intrinsic stochasticity of such an environmental parameter. Given this result, effects of randomly fluctuating irradiance on the population dynamics of a marine ecosystem are studied on the basis of the stochastic 0-dimensional biogeochemical flux model. The noisy fluctuations of the irradiance are formally described as a multiplicative Ornstein-Uhlenbeck process, that is a self-correlated Gaussian noise.

Hydrology, biogeochemistry and metabolism in a semi-arid mediterranean coastal wetland ecosystem.

A LOICZ Budget Model is applied to the Ichkeul Lake, a wetland ecosystem of the South Mediterranean-North African region, to evaluate its functioning in order to boost water management. The Ichkeul Lake water and nutrient budget, net ecosystem metabolism (NEM), nutrient availability, and their seasonal changes are estimated using field data. A considerable anthropogenic-driven amount of nitrogen is transferred into N/NO to the atmosphere during the dry season with predominance of denitrification-anammox processes.

Indexes for the assessment of bacterial pollution in bathing waters from point sources: The northern Adriatic Sea CADEAU service.

This paper presents a novel set of water quality indexes to identify the area potentially affected by point sources of bacterial pollution in coastal bathing waters. The indexes, developed in the framework of the CADEAU service, are evaluated on the results of a modelling system based on the integration of a high-resolution ocean model, remote sensing observations and in situ monitoring data for the northern Adriatic Sea. In particular, the system is a downscaling of the Mediterranean Copernicus Marine Environment Monitoring Service and exploits data produced within the Bathing Waters Directive, the Water Framework Directive and the Urban Waste Water Treatment Directive to create added value products.

Mercury dynamics in a changing coastal area over industrial and postindustrial phases: Lessons from the Venice Lagoon.

During the industrial period, significant amounts of mercury (Hg) were discharged into the Venice Lagoon. Here, a spatially explicit model was implemented to reconstruct the temporal evolution of the total mercury (Hg) and methylmercury (MeHg) concentrations in lagoon water and sediments over two centuries (1900-2100), from preindustrial to postindustrial phases. The model simulates the transport and transformations of particulate and dissolved Hg species.

Ecosystem functioning of two marine food webs in the North-Western Ionian Sea (Central Mediterranean Sea).

The ecosystem functioning of two marine food webs covering the north-eastern (Salento) and south-western (Calabria) sectors of the North-Western Ionian Sea (NWIS) (Central Mediterranean Sea) was investigated through a food-web model. Data inputs covered a wide set of ecological information applied to 58 functional groups (FGs). The sum of consumption and the mean predation mortality rate were calculated for benthic, demersal, and pelagic subsystems indicating the predator and prey roles of the FGs.

Cumulative Impact Index for the Adriatic Sea: Accounting for interactions among climate and anthropogenic pressures.

Assessing and managing cumulative impacts produced by interactive anthropogenic and natural drivers is a major challenge to achieve the sustainable use of marine spaces in line with the objectives of relevant EU acquis. However, the complexity of the marine environment and the uncertainty linked to future climate and socio-economic scenarios, represent major obstacles for understanding the multiplicity of impacts on the marine ecosystems and to identify appropriate management strategies to be implemented. Going beyond the traditional additive approach for cumulative impact appraisal, the Cumulative Impact Index (CI-Index) proposed in this paper applies advanced Multi-Criteria Decision Analysis techniques to spatially model relationships between interactive climate and anthropogenic pressures, the environmental exposure and vulnerability patterns and the potential cumulative impacts for the marine ecosystems at risk.

Benthic-pelagic coupling mediates interactions in Mediterranean mixed fisheries: An ecosystem modeling approach.

Benthic-pelagic coupling plays a pivotal role in aquatic ecosystems but the effects of fishery driven interactions on its functioning has been largely overlooked. Disentangling the benthic-pelagic links including effects of mixed fisheries, however, needs sketching a whole description of ecosystem interactions using quantitative tools. A holistic food web model has been here developed in order to understand the interplay between the benthic-pelagic coupling and mixed fisheries in a Mediterranean system such as the Strait of Sicily.

Erratum: Fish and fishery historical data since the 19th century in the Adriatic Sea, Mediterranean.

This corrects the article DOI: 10.1038/sdata.2017.

Fish and fishery historical data since the 19th century in the Adriatic Sea, Mediterranean.

Historic data on biodiversity provide the context for present observations and allow studying long-term changes in marine populations. Here we present multiple datasets on fish and fisheries of the Adriatic Sea covering the last two centuries encompassing from qualitative observations to standardised scientific monitoring. The datasets consist of three groups: (1) early naturalists' descriptions of fish fauna, including information (e.

3D modeling of phytoplankton seasonal variation and nutrient budget in a southern Mediterranean Lagoon.

A 3D coupled physical-biogeochemical model is developed and applied to Bizerte Lagoon (Tunisia), in order to understand and quantitatively assess its hydrobiological functioning and nutrients budget. The biogeochemical module accounts for nitrogen and phosphorus and includes the water column and upper sediment layer. The simulations showed that water circulation and the seasonal patterns of nutrients, phytoplankton and dissolved oxygen were satisfactorily reproduced.

Hydrodynamic properties of San Quintin Bay, Baja California: Merging models and observations.

We investigated the physical dynamics of San Quintin Bay, a coastal lagoon located on the Pacific coast of northern Baja California, Mexico. We implemented, validated and used a finite element 2-D hydrodynamic model to characterize the spatial and temporal variability of the hydrodynamic of the bay in response to variability in the tidal regime and in meteorological forcing patterns. Our analysis of general circulation, residual currents, residence times, and tidal propagation delays allowed us to characterize spatial variability in the hydrodynamic basin features.

Calcareous Bio-Concretions in the Northern Adriatic Sea: Habitat Types, Environmental Factors that Influence Habitat Distributions, and Predictive Modeling.

Habitat classifications provide guidelines for mapping and comparing marine resources across geographic regions. Calcareous bio-concretions and their associated biota have not been exhaustively categorized. Furthermore, for management and conservation purposes, species and habitat mapping is critical.

Emergent Properties Delineate Marine Ecosystem Perturbation and Recovery.

Whether there are common and emergent patterns from marine ecosystems remains an important question because marine ecosystems provide billions of dollars of ecosystem services to the global community, but face many perturbations with significant consequences. Here, we develop cumulative trophic patterns for marine ecosystems, featuring sigmoidal cumulative biomass (cumB)-trophic level (TL) and 'hockey-stick' production (cumP)-cumB curves. The patterns have a trophodynamic theoretical basis and capitalize on emergent, fundamental, and invariant features of marine ecosystems.

Assessment of oil slick hazard and risk at vulnerable coastal sites.

This work gives an assessment of the hazard faced by Sicily coasts regarding potential offshore surface oil spill events and provides a risk assessment for Sites of Community Importance (SCI) and Special Protection Areas (SPA). A lagrangian module, coupled with a high resolution finite element three dimensional hydrodynamic model, was used to track the ensemble of a large number of surface trajectories followed by particles released over 6 selected areas located inside the Sicily Channel. The analysis was carried out under multiple scenarios of meteorological conditions.

A 3-D variational assimilation scheme in coupled transport-biogeochemical models: Forecast of Mediterranean biogeochemical properties.

[1] Increasing attention is dedicated to the implementation of suitable marine forecast systems for the estimate of the state of the ocean. Within the framework of the European MyOcean infrastructure, the pre-existing short-term Mediterranean Sea biogeochemistry operational forecast system has been upgraded by assimilating remotely sensed ocean color data in the coupled transport-biogeochemical model OPATM-BFM using a 3-D variational data assimilation (3D-VAR) procedure. In the present work, the 3D-VAR scheme is used to correct the four phytoplankton functional groups included in the OPATM-BFM in the period July 2007 to September 2008.

Microphytobenthic response to mussel farm biodeposition in coastal sediments of the northern Adriatic Sea.

The effects of long-line mussel farming on microphytobenthos were investigated in a coastal area of the Gulf of Trieste. Sediment grain-size, organic matter content, microalgal abundance and community structure were analysed in September 2008 and March 2009. Four areas were sampled: a twenty-year farm, a four-year farm, a disused farm and a reference site.

Fuzziness and heterogeneity of benthic metacommunities in a complex transitional system.

We propose an extension to the metacommunity (MC) concept and a novel operational methodology that has the potential to refine the analysis of MC structure at different hierarchical levels. We show that assemblages of species can also be seen as assemblages of abstract subregional habitat-related metacommunities (habMCs). This intrinsically fuzzy concept recognizes the existence of habMCs that are typically associated with given habitats, while allowing for the mixing and superposition of different habMCs in all sites and for boundaries among subregions that are neither spatially sharp nor temporally constant.

Assessing confinement in coastal lagoons.

Measures of transport scale in aquatic systems can contribute to the formulation of definitions of indicators of the system's ecological properties. This paper addresses confinement, a specific transport scale proposed by biological scientists as a parameter that can capture and synthesize the principal properties that determine the spatial structure of biological communities in transitional environments. Currently, there is no direct experimental measure of confinement.

Coding early naturalists' accounts into long-term fish community changes in the Adriatic Sea (1800-2000).

The understanding of fish communities' changes over the past centuries has important implications for conservation policy and marine resource management. However, reconstructing these changes is difficult because information on marine communities before the second half of the 20(th) century is, in most cases, anecdotal and merely qualitative. Therefore, historical qualitative records and modern quantitative data are not directly comparable, and their integration for long-term analyses is not straightforward.