Publications by authors named "Clarke C"

The reduced density matrix that characterises the state of an open quantum system is a projection from the full density matrix of the quantum system and its environment, and there are many full density matrices consistent with a given reduced version. Without a specification of relevant details of the environment, the time evolution of a reduced density matrix is therefore typically unpredictable, even if the dynamics of the full density matrix are deterministic. With this in mind, we investigate a two-level open quantum system using a framework of quantum state diffusion.

View Article and Find Full Text PDF

Guidelines suggest the Liver Imaging Reporting and Data System (LI-RADS) may not be applicable for some populations at risk for hepatocellular carcinoma (HCC). However, data assessing the association of HCC risk factors with LI-RADS major features are lacking. To evaluate whether the association between HCC risk factors and each CT/MRI LI-RADS major feature differs among individuals at-risk for HCC.

View Article and Find Full Text PDF

Approximately 30% of cancer patients experience kidney complications, which hinder optimal cancer management, imposing a burden on patients' quality of life and the healthcare system. The etiology of kidney complications in cancer patients is often attributed to oncological therapies. However, the direct impact of cancer on kidney health is underestimated.

View Article and Find Full Text PDF

This study explored experienced weight stigma, internalised weight bias and depressive symptom severity in lipoedema, a chronic health condition that primarily affects women and involves painful and disproportionate adipose tissue. This study utilised an international cross-sectional online survey involving N = 1070 women over 18 years old (M = 48.9 years old) with self-reported diagnosed or suspected lipoedema.

View Article and Find Full Text PDF
Article Synopsis
  • The text discusses the importance of databases for molecules and materials in chemical research, particularly those that include quantum chemistry data from methods like density functional theory.
  • It highlights the success of platforms like the Materials Project in the materials community while noting that molecular quantum data is still scattered across various datasets without a unified system.
  • The authors present seven guiding principles, called QUANTUM, based on the FAIR principles, aimed at improving the integration and development of molecular databases for better accessibility and usefulness in future research.
View Article and Find Full Text PDF

Objectives: While Escherichia coli phylogroup-A is typically associated with commensal strains, some isolates can harbour virulence and exhibit multidrug-resistant (MDR) phenotypes. We report the draft genome of a rare instance of carbapenem, fosfomycin and colistin resistant E. coli phylogroup-A, isolated as part of routine screening of a human patient in a clinical setting in Ireland.

View Article and Find Full Text PDF

Activating mutations in the epidermal growth factor receptor (EGFR) promote ligand-independent signaling; however, the mechanisms involved are poorly defined, and it is unknown whether this generates specific vulnerabilities. We previously observed robust expression of protein kinase Cα (PKCα) in lung adenocarcinoma (LUAD) with mutant EGFR (mEGFR), which, unlike the activation of PKCα, is independent of mEGFR activity. Here, we identify a critical role for PKCα in anchorage-independent growth and survival of lung cancer cells with mEGFR.

View Article and Find Full Text PDF

Background: Loss of communication with loved ones and carers is one of the most isolating and debilitating effects of many neurological disorders. Assistive technology (AT) supports individuals with communication, but the acceptability of AT solutions is highly variable. In this paper a novel ear based control method of AT, the concept of 'EarSwitch', is presented.

View Article and Find Full Text PDF
Article Synopsis
  • * A total of 18 carbapenemase variants were identified, predominantly in ST131 clades A and C, with the most common variants being detected in 14 and 12 countries, respectively.
  • * The rise in isolates carrying these genes since 2021 highlights a significant public health threat posed by the high-risk ST131 lineage.
View Article and Find Full Text PDF
Article Synopsis
  • Thiamin foliar application has been shown to enhance plant immunity and effectively control some diseases, but its impact on potato diseases hasn’t been well studied.
  • In this research, thiamin reduced early blight lesion sizes by about 33% when applied at 10 mM, though the protective effect was temporary and localized to the treated leaves.
  • Gene expression analysis indicated that thiamin influenced the activation of numerous pathways related to plant defense and metabolism, suggesting it helps prime plant defenses by altering primary metabolism.
View Article and Find Full Text PDF

Hypervalent iodine(III) reagents have become indispensable tools in organic synthesis, but gaps remain in the functionalities they can transfer. In this study, a fundamental understanding of the thermal stability of phosphorus-iodonium ylids is obtained through X-ray diffraction, differential scanning calorimetry (DSC) and thermogravimetric analysis (TGA). Insights into the structural factors affecting thermal stability and potential decomposition pathways will enable the future design and development of new reagents.

View Article and Find Full Text PDF

Children diagnosed with acute myeloid leukaemia (paediatric AML [pAML]) have limited treatment options and relapse rates due to chemoresistance and refractory disease are over 30%. Current treatment is cytotoxic and in itself has long-lasting harsh side effects. New, less toxic treatments are needed.

View Article and Find Full Text PDF

Background: A dementia diagnosis can lead to a decline in cognitive, social, and physical health, but people with dementia can live meaningful lives and participate actively in society with psychosocial support. This single-arm, non-randomised feasibility study explored the feasibility and acceptability of a Comprehensive REsilience-building psychoSocial intervenTion (CREST) for people with dementia, their caregivers, General Practitioners (GPs), and the public.

Methods: Nine people with dementia and their primary caregivers living in the community (n = 9 dyads) completed the CREST intervention which had three components (cognitive stimulation therapy [CST], physical exercise, and dementia education).

View Article and Find Full Text PDF

Aim: Although standardised summary codes to classify colonic findings (C-codes) on computed tomography colonography (CTC) have been used for several years, there is no clear guidance on how these codes should be interpreted. The aims of this study were to (1) establish CTC C-code demographics and reporting practice at our hospital and (2) determine the agreement between CTC reporters when using C-codes.

Materials And Methods: Waiving ethical approval, this online questionnaire study invited all radiologists, reporting radiographers and radiology trainees who reported CTC at our hospital between 22/02/2023 and 05/03/2023.

View Article and Find Full Text PDF

Barriers to healthcare and negative healthcare experiences are frequently reported by transgender people, which is known to be compounded by intersectional issues including racism. The present study aimed to explore the experiences of trans people of color accessing a national Gender Service in the United Kingdom, to better understand the facilitators and barriers to positive healthcare experiences. Six transgender people of color attended two separate focus groups.

View Article and Find Full Text PDF
Article Synopsis
  • Innovations in advanced prostate cancer have improved outcomes, but there's still a lack of high-level evidence in clinical management, prompting the 2024 Advanced Prostate Cancer Consensus Conference to survey experts for insights.
  • A panel of 120 international experts developed and voted on 183 consensus questions through a web-based survey prior to the conference, defining consensus as ≥75% agreement.
  • The voting results highlight areas of agreement and disagreement that can guide clinical decisions and future research, with a focus on individualizing treatment based on patient characteristics and encouraging participation in clinical trials.
View Article and Find Full Text PDF

Background: Sleep disturbances are common and distressing for people with dementia and their families. Non-pharmacological interventions should be first-line management, avoiding harmful pharmacological side-effects, but there is none with known effectiveness. We aimed to establish whether DREAMS START, a multicomponent intervention, reduced sleep disturbance in people with dementia living at home compared with usual care.

View Article and Find Full Text PDF
Article Synopsis
  • * Using ribosome footprint profiling (Ribo-seq), researchers discovered new open reading frames (ORFs) and many short ORFs (sORFs) that may code for microproteins, which could impact the quality of antibody products.
  • * Analyzing eight commercial antibody products showed that microprotein impurities exist and their levels fluctuate depending on the growth phase and culture environment, highlighting the need for better resources to study translation regulation in CHO cells.
View Article and Find Full Text PDF
Article Synopsis
  • People with Parkinson's disease often have speech problems, affecting how they talk and interact with others.
  • The PD COMM trial tested two types of therapy to help with these speech issues: one is called Lee Silverman Voice Treatment LOUD, and the other is regular speech therapy from the National Health Service.
  • The study took place in the UK and involved different groups of participants, comparing the effectiveness and cost of each therapy method against doing nothing.
View Article and Find Full Text PDF

Coenzyme Q (CoQ) is a redox-active lipid molecule that acts as an electron carrier in the mitochondrial electron transport chain. In Saccharomyces cerevisiae, CoQ is synthesized in the mitochondrial matrix by a multisubunit protein-lipid complex termed the CoQ synthome, the spatial positioning of which is coordinated by the endoplasmic reticulum-mitochondria encounter structure (ERMES). The MDM12 gene encoding the cytosolic subunit of ERMES is coexpressed with COQ10, which encodes the putative CoQ chaperone Coq10, via a shared bidirectional promoter.

View Article and Find Full Text PDF
Article Synopsis
  • The study evaluates how the presence of concurrent LR-5 observations impacts the likelihood that LR-3 or LR-4 observations indicate hepatocellular carcinoma (HCC), using a meta-analysis approach.
  • The research analyzed data from 29 studies involving 2,591 observations across 1,456 patients, examining the predictive values of LR-3 and LR-4 with and without concurrent LR-5 observations.
  • Results showed no significant difference in the positive predictive value for LR-3 and LR-4 observations whether concurrent LR-5 was present or not, suggesting that the presence of LR-5 does not substantially affect HCC diagnosis.
View Article and Find Full Text PDF