Publications by authors named "CiarAn Kennedy"

Article Synopsis
  • Current methods for assessing disease severity and progression in Chronic Kidney Disease (CKD) are limited, prompting a study that highlights FERM-domain containing protein 3 (FRMD3) as a key candidate for further research.
  • Using RNA sequencing, the study analyzed CKD biopsies and correlated gene expression with clinical indicators, discovering 93 genes related to CKD severity and progression, including FRMD3.
  • Further investigation into FRMD3 showed its importance in cell structure and health, with knockdown experiments indicating its role in preventing cell death and maintaining cell junction integrity.
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Objectives: To understand commonalities and differences in injured patient experiences of accessing and receiving quality injury care across three lower-income and middle-income countries.

Design: A qualitative interview study. The interviews were audiorecorded, transcribed and thematically analysed.

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Background And Aims: Activation of vascular smooth muscle cell inflammation is recognised as an important early driver of vascular disease. We have previously identified the let-7 miRNA family as important regulators of inflammation in in vitro and in vivo models of atherosclerosis. Here we investigated a dual statin/let-7d-5p miRNA combination therapy approach to target human aortic SMC (HAoSMC) activation and inflammation.

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Fibroblasts acquire a proinflammatory phenotype in inflammatory bowel disease, but the factors driving this process and how fibroblasts contribute to mucosal immune responses are incompletely understood. TNF superfamily member 12 (TNFSF12, or TNF-like weak inducer of apoptosis [TWEAK]) has gained interest as a mediator of chronic inflammation. In this study, we explore its role as a driver of inflammatory responses in fibroblasts and its contribution to fibroblast-monocyte interaction using human primary colonic fibroblasts, THP-1 and primary monocytes.

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Article Synopsis
  • TGFβ1 regulates kidney cell fate and fibrosis progression.
  • SMAD3 and EZH2 co-occupy specific genomic regions in kidney stem cells and their derivatives.
  • Inhibiting EZH2 disrupts SMAD3 activity and prevents myofibroblast activation, highlighting a key mechanism in kidney fibrosis.
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Article Synopsis
  • Human induced pluripotent stem cell (hiPSC)-derived kidney organoids show promise for disease modeling and personalized medicine, but improvements in their formation methods are needed.* -
  • Researchers matured these organoids in synthetic self-assembling peptide hydrogels (SAPHs) with varying stiffness, achieving structures similar to those grown in traditional animal-derived matrices like Matrigel.* -
  • Analysis revealed that organoids developed in higher stiffness SAPHs had more mature podocyte gene expressions and fewer off-target cell types, highlighting the benefits of using synthetic hydrogels for kidney organoid maturation.*
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Background: Smoking is responsible for substantial cardiovascular morbidity and mortality. Electronic cigarettes have been advocated as a means to reduce this disease burden; by reducing exposure to harmful substances in smokers who are unable to quit. Concerns have been raised however, about cardiovascular effects of their use, with inhalants containing carbonyls and fine particulate matter.

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Article Synopsis
  • Cell differentiation is influenced by external signals and internal changes in gene regulation, particularly controlled by the PRC2 protein complex, which modifies histones to regulate gene expression.
  • The study investigated the role of EZH2, a key part of PRC2, in neuroepithelial cell differentiation and the reverse process in retinal cells, revealing Smad3 as a crucial interacting partner of EZH2.
  • The interaction between Smad3 and EZH2 helps target specific genomic regions to regulate gene silencing through epigenetic changes, acting as a regulatory switch for cell fate determination.
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Background: Techniques for the accurate identification of activating mutations of BRAF in metastatic melanoma are of great clinical importance, due to the availability of targeted therapies for these tumors. There is uncertainty regarding the frequency with which BRAF status differs between primary and metastatic sites.

Methods: Between 2011 and 2016, 219 melanoma cases underwent BRAF testing in our institution.

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Background: The genetic cascades underpinning vertebrate early eye morphogenesis are poorly understood. One gene family essential for eye morphogenesis encodes the retinal homeobox (Rx) transcription factors. Mutations in the human retinal homeobox gene (RAX) can lead to gross morphological phenotypes ranging from microphthalmia to anophthalmia.

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Our objective was to profile genetic pathways whose differential expression correlates with maturation of visual function in zebrafish. Bioinformatic analysis of transcriptomic data revealed Jak-Stat signalling as the pathway most enriched in the eye, as visual function develops. Real-time PCR, western blotting, immunohistochemistry and in situ hybridization data confirm that multiple Jak-Stat pathway genes are up-regulated in the zebrafish eye between 3-5 days post-fertilisation, times associated with significant maturation of vision.

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