Publications by authors named "Christophe Verlinde"

The intestinal protozoan is a leading cause of diarrheal disease and mortality in young children. There is currently no fully effective treatment for cryptosporidiosis, which has stimulated interest in anticryptosporidial development over the last ∼10 years, with numerous lead compounds identified, including several tRNA synthetase inhibitors. Here, we report the results of a dairy calf efficacy trial of the methionyl-tRNA ( MetRS [MetRS]) synthetase inhibitor 2093 and the spontaneous emergence of drug resistance.

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  • New drugs are urgently needed to treat infections in malnourished children under 2 and individuals with weakened immune systems in developing countries.
  • Researchers screened bioactive compounds from the Tres-Cantos GSK library, identifying 19 compounds and narrowing them down to four clusters for further testing in a mouse infection model.
  • Only one compound, an imidazole-pyrimidine, showed significant effectiveness in clearing the infection, demonstrating good safety and activity at low doses, and it targets calcium-dependent protein kinase 1, suggesting potential for future therapeutic development.
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  • Researchers developed two groups of new inhibitors for the enzyme methionyl-tRNA synthetase (MetRS) found in parasites, utilizing different chemical linkers in their design.
  • Both groups of inhibitors were effective at low concentrations (EC < 10 nM) in stopping parasite growth, while showing minimal toxicity to human cells (CCs > 20,000 nM).
  • Despite their effectiveness, the inhibitors had limited ability to cross the blood-brain barrier, indicating that further modifications are needed for treatment in advanced cases of human African trypanosomiasis.
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Cryptosporidiosis is one of the leading causes of moderate to severe diarrhea in children in low-resource settings. The therapeutic options for cryptosporidiosis are limited to one drug, nitazoxanide, which unfortunately has poor activity in the most needy populations of malnourished children and HIV-infected persons. We describe here the discovery and early optimization of a class of imidazopyridine-containing compounds with potential for treating infections.

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  • Mycobacterium tuberculosis causes about 1.5 million deaths each year, and current treatments involve long-term medication with serious side effects, leading to drug resistance.
  • Researchers have revealed the crystal structure of the methionyl-tRNA synthetase (MetRS) from M. tuberculosis, identifying key differences in the enzyme's active site compared to human enzymes.
  • These differences suggest the potential for developing selective inhibitors that can target the bacterial enzyme more effectively without impacting human enzymes, which is crucial for new treatment options.
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The apicomplexan protozoan parasites include the causative agents of animal and human diseases ranging from malaria (Plasmodium spp.) to toxoplasmosis (Toxoplasma gondii). The complex life cycle of T.

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Antibiotic-resistant bacteria are widespread and pose a growing threat to human health. New antibiotics acting by novel mechanisms of action are needed to address this challenge. The bacterial methionyl-tRNA synthetase (MetRS) enzyme is essential for protein synthesis, and the type found in Gram-positive bacteria is substantially different from its counterpart found in the mammalian cytoplasm.

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  • To enhance the effectiveness of these inhibitors, researchers investigated a binding fragment that targets a specific region known as the "enlarged methionine pocket" (EMP).
  • This led to the discovery of a 6,8-dichloro-tetrahydroquinoline ring, which when substituted into compound 2 resulted in a new compound, 13, showing a remarkable potency with an EC of 4nM.
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  • The crystal structure of LdTyrRS (Leishmania donovani tyrosyl-tRNA synthetase) was determined at a resolution of 2.75 Å, revealing its complex with a nanobody and a tyrosyl adenylate analog.
  • The nanobody stabilizes LdTyrRS by reducing the flexibility of a specific loop and allows for crucial interactions with the enzyme's active site, which is necessary for tRNA charging.
  • An "extra pocket" (EP) near the adenine binding site presents a unique target for drug development to treat infections caused by L. donovani, potentially leading to therapies for various parasitic diseases due to similarities in other pathogenic protozoa.
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  • - A screening hit against Trypanosoma brucei methionyl-tRNA synthetase was enhanced using a structure-based method, leading to two new series of effective inhibitors: cyclic linker and linear linker series.
  • - The compounds from both series showed strong inhibition of T. brucei growth with low toxicity to mammalian cells, particularly compound 16 and 31, which had effective concentrations of 39 nM and 22 nM, respectively.
  • - Additionally, compound 31 demonstrated good pharmacokinetic properties after oral doses in mice and moderate brain permeability, making them promising candidates for developing new treatments for human African trypanosomiasis (HAT).
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Fluorination is a well-known strategy for improving the bioavailability of drug molecules. However, its impact on efficacy is not easily predicted. On the basis of inhibitor-bound protein crystal structures, we found a beneficial fluorination spot for inhibitors targeting methionyl-tRNA synthetase of Trypanosoma brucei.

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The methionyl-tRNA synthetase (MetRS) is a novel drug target for the protozoan pathogen Giardia intestinalis. This protist contains a single MetRS that is distinct from the human cytoplasmic MetRS. A panel of MetRS inhibitors was tested against recombinant Giardia MetRS, Giardia trophozoites, and mammalian cell lines.

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  • Chagas disease, caused by the parasite Trypanosoma cruzi, is a neglected tropical disease that leads to severe health issues and currently has limited treatment options due to drug toxicity and poor effectiveness.
  • Researchers focused on the structure of T. cruzi histidyl-tRNA synthetase (HisRS), a well-known drug target, to find specific inhibitors by screening small molecules that could bind to this protein.
  • The study identified 15 fragments that bind to a crucial site on the HisRS protein, which could lead to the design of new, more effective drugs specifically targeting trypanosomatid HisRS for Chagas disease treatment.
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Improved therapies for the treatment of Trypanosoma brucei, the etiological agent of the neglected tropical disease human African trypanosomiasis, are urgently needed. We targeted T. brucei methionyl-tRNA synthetase (MetRS), an aminoacyl-tRNA synthase (aaRS), which is considered an important drug target due to its role in protein synthesis, cell survival, and its significant differences in structure from its mammalian ortholog.

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  • - TbMetRS is a crucial enzyme in Trypanosoma brucei that is being targeted for new antitrypanosomal drugs due to its essential role and adaptable structure when binding with various compounds.
  • - A series of urea-based inhibitors (UBIs) have been developed that effectively inhibit TbMetRS with very low IC50 values and show the potential for oral use and crossing the blood-brain barrier, making them strong candidates for treating late-stage human African trypanosomiasis.
  • - Structural analysis of 14 UBIs has revealed their binding interactions within TbMetRS, suggesting that they can fill key binding pockets without competing with ATP, pointing towards a novel drug design strategy that could be applied to other
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Malaria remains a major health concern for a large percentage of the world's population. While great strides have been made in reducing mortality due to malaria, new strategies and therapies are still needed. Therapies that are capable of blocking the transmission of Plasmodium parasites are particularly attractive, but only primaquine accomplishes this, and toxicity issues hamper its widespread use.

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  • 5-Aminopyrazole-4-carboxamide served as a new structural basis to replace a component in a known inhibitor targeting calcium-dependent protein kinase-1.
  • The resulting compounds showed very effective (low nanomolar) inhibition against the targeted enzymes.
  • The best inhibitors were not only selective but also demonstrated low toxicity and effectiveness in cell proliferation tests.
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  • Malaria is spread by mosquitoes, and blocking its transmission is essential for reducing infection rates, particularly in areas where it is common.
  • Researchers discovered a new class of compounds that inhibit a specific enzyme (CDPK4) in the malaria parasite, which is crucial for transmission, while sparing human kinases.
  • They demonstrated that these compounds effectively targeted the CDPK4 enzyme in genetically modified P. falciparum parasites and proposed combining these agents with existing antimalarials like artemisinin to better combat malaria transmission, including resistant strains.
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New dialkylimidazole based sterol 14α-demethylase inhibitors were prepared and tested as potential anti-Trypanosoma cruzi agents. Previous studies had identified compound 2 as the most potent and selective inhibitor against parasite cultures. In addition, animal studies had demonstrated that compound 2 is highly efficacious in the acute model of the disease.

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Apicomplexan parasites enter host cells by many sophisticated steps including use of an ATP-powered invasion machinery. The machinery consists of multiple proteins, including a special myosin (MyoA) which moves along an actin fiber and which is connected to the myosin tail interaction protein (MTIP). Here we report a crystal structure of the major MyoA-binding domain (D3) of Plasmodium falciparum MTIP in complex with an anti-MTIP nanobody.

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  • * Aminoacyl-tRNA synthetases, crucial for protein synthesis, are identified as promising drug targets against malaria, with the study focusing on the crystal structures of the Pf-cTrpRS enzyme in different states.
  • * The structural analysis reveals significant conformational changes in Pf-cTrpRS when bound to the ligand WAMP, suggesting potential avenues for creating selective inhibitors that could lead to new anti-malaria treatments.
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New classes of antiparasitic drugs active against Trypanosoma brucei are needed to combat human African trypanosomiasis. Inhibitors of methionyl-tRNA synthetase (MetRS) have excellent potential to be developed for this purpose (S. Shibata, J.

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The genome of the human intestinal parasite Giardia lamblia contains only a single aminoacyl-tRNA synthetase gene for each amino acid. The Giardia prolyl-tRNA synthetase gene product was originally misidentified as a dual-specificity Pro/Cys enzyme, in part owing to its unexpectedly high off-target activation of cysteine, but is now believed to be a normal representative of the class of archaeal/eukaryotic prolyl-tRNA synthetases. The 2.

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To guide development of new drugs targeting methionyl-tRNA synthetase (MetRS) for treatment of human African trypanosomiasis, crystal structure determinations of Trypanosoma brucei MetRS in complex with its substrate methionine and its intermediate product methionyl-adenylate were followed by those of the enzyme in complex with high-affinity aminoquinolone inhibitors via soaking experiments. Drastic changes in conformation of one of the two enzymes in the asymmetric unit allowed these inhibitors to occupy an enlarged methionine pocket and a new so-called auxiliary pocket. Interestingly, a small low-affinity compound caused the same conformational changes, removed the methionine without occupying the methionine pocket, and occupied the previously not existing auxiliary pocket.

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Calcium-dependent protein kinase-1 (CDPK1) from Cryptosporidium parvum (CpCDPK1) and Toxoplasma gondii (TgCDPK1) have become attractive targets for discovering selective inhibitors to combat infections caused by these protozoa. We used structure-based design to improve a series of benzoylbenzimidazole-based compounds in terms of solubility, selectivity, and potency against CpCDPK1 and TgCDPK1. The best inhibitors show inhibitory potencies below 50 nM and selectivity well above 200-fold over two human kinases with small gatekeeper residues.

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