Tumour growth rate predicts overall survival in patients with recurrent WHO grade 4 glioma.

Purpose: Accurate prognostication may aid in the selection of patients who will benefit from surgery at recurrent WHO grade 4 glioma. This study aimed to evaluate the role of serial tumour volumetric measurements for prognostication at first tumour recurrence.

Methods: We retrospectively analyzed patients with histologically-diagnosed WHO grade 4 glioma at initial and at first tumour recurrence at a tertiary hospital between May 2000 and September 2018.

Oral Cancer Awareness of Tertiary Education Students and General Public in Singapore.

Objectives: Oral cancer confers high morbidity and mortality rates. Late diagnosis of oral cancer is linked to a lack of awareness of its existence and known risk factors. The purpose of this survey was to examine the knowledge and awareness of oral cancer amongst different groups in Singapore.

Comprehensive engineering of a therapeutic neutralizing antibody targeting SARS-CoV-2 spike protein to neutralize escape variants.

The emergence of escape variants of SARS-CoV-2 carrying mutations in the spike protein poses a challenge for therapeutic antibodies. Here, we show that through the comprehensive engineering of the variable region of the neutralizing monoclonal antibody 5A6, the engineered antibody, 5A6CCS1, is able to neutralize SARS-CoV-2 variants that escaped neutralization by the original 5A6 antibody. In addition to the improved affinity against variants, 5A6CCS1 was also optimized to achieve high solubility and low viscosity, enabling a high concentration formulation for subcutaneous injection.

Evolution of trimethoprim/sulfamethoxazole resistance in Shewanella algae from the perspective of comparative genomics and global phylogenic analysis.

Objective: Shewanella algae is a zoonotic marine bacterium that causes a variety of infections in immunocompromised patients or those who have been exposed to seawater. The development of trimethoprim/sulfamethoxazole (TMP/SMX) resistance in S. algae are found in human and environment isolates during the past ten years, and thus the treatment options are decreasing.

Two Paediatric Patients with Encephalopathy and Concurrent COVID-19 Infection: Two Sides of the Same Coin?

There is increasing evidence that SARS-CoV-2 has neurotropic potential. We report on two paediatric patients who presented with encephalopathy during COVID-19 illness. Both patients had ADEM-like changes in their neuroimaging, negative SARS-CoV-2 RNA PCR in CSF, and paucity of PIMS-TS laboratory findings.

Poor preoperative quality of life predicts prolonged hospital stay after VATS lobectomy for lung cancer.

Objectives: The aim of this study was to assess whether quality of life (QoL) scales are associated with postoperative length of stay (LoS) following video-assisted thoracoscopic surgery (VATS) lobectomy for lung cancer.

Methods: This is a single-centre retrospective analysis on 250 consecutive patients submitted to VATS lobectomies (233) or segmentectomies (17) over a period of 3 years. QoL was assessed in all patients by the self-administration of the European Organization for Research and Treatment of Cancer Quality of Life Questionnaire-C30 questionnaire.

Evaluation of the performance of IND/Zn and DFO on various porous substrates in Singapore context.

Enhancement of latent fingermarks found at crime scenes can be crucial to criminal investigations. The performance of ninhydrin analogues 1,2-indanedione (IND/Zn) and 1,8-diazafluoren-9-one (DFO) used in laboratories for the enhancement of latent fingermarks on porous substrates were compared for operational use. The visualisation of enhanced latent fingermarks on seven substrates commonly encountered in local crimes - plain A4 paper, glossy magazine, paper magazine, brown envelopes, white envelopes, cardboard, and joss paper were assessed using fingermarks deposits from seven donors.

Workers' compensation injury claims among workers in the private ambulance services industry-Ohio, 2001-2011.

Background: Ambulance service workers frequently transfer and transport patients. These tasks involve occupational injury risks such as heavy lifting, awkward postures, and frequent motor vehicle travel.

Methods: We examined Ohio workers' compensation injury claims among state-insured ambulance service workers working for private employers from 2001 to 2011.

Risk factors for unintentional occupational injury among urban transit bus drivers: a cohort longitudinal study.

Purpose: Although many studies have focused on bus operators' occupational diseases, work-related injury and associated risk factor data are limited. The purpose of this longitudinal study was to investigate unintentional injury and exposures that may affect injury risk among metropolitan bus operators.

Methods: Demographic, work-related, and injury data obtained from a metropolitan transit company for a 5-year period, enabled estimates of rates per 100 full time equivalents (FTEs) and adjusted Hazard Ratios (HRs), with 95% confidence intervals (CIs), using Generalized Estimating Equations and Cox proportional hazards models, respectively.

Applying Machine Learning to Workers' Compensation Data to Identify Industry-Specific Ergonomic and Safety Prevention Priorities: Ohio, 2001 to 2011.

Objective: This study leveraged a state workers' compensation claims database and machine learning techniques to target prevention efforts by injury causation and industry.

Methods: Injury causation auto-coding methods were developed to code more than 1.2 million Ohio Bureau of Workers' Compensation claims for this study.

Development of methods for using workers' compensation data for surveillance and prevention of occupational injuries among State-insured private employers in Ohio.

Background: Workers' compensation (WC) claims data may be useful for identifying high-risk industries and developing prevention strategies.

Methods: WC claims data from private-industry employers insured by the Ohio state-based workers' compensation carrier from 2001 to 2011 were linked with the state's unemployment insurance (UI) data on the employer's industry and number of employees. National Labor Productivity and Costs survey data were used to adjust UI data and estimate full-time equivalents (FTE).

Smartphone spectrometer for colorimetric biosensing.

We report on a smartphone spectrometer for colorimetric biosensing applications. The spectrometer relies on a sample cell with an integrated grating substrate, and the smartphone's built-in light-emitting diode flash and camera. The feasibility of the smartphone spectrometer is demonstrated for detection of glucose and human cardiac troponin I, the latter in conjunction with peptide-functionalized gold nanoparticles.

Work-related violence against educators in Minnesota: rates and risks based on hours exposed.

Problem: Violence is a major occupational problem; yet, rigorous studies focused on educators to address this problem are limited. The objective was to identify educators' potential risks for physical assault (PA) and nonphysical violence (NPV), based on hours exposed.

Methods: A total of 4,731 licensed kindergarten through grade 12 Minnesota educators, identified from the Minnesota Department of Education database, participated.

ATP binding to p97/VCP D1 domain regulates selective recruitment of adaptors to its proximal N-domain.

p97/Valosin-containing protein (VCP) is a member of the AAA-ATPase family involved in many cellular processes including cell division, intracellular trafficking and extraction of misfolded proteins in endoplasmic reticulum-associated degradation (ERAD). It is a homohexamer with each subunit containing two tandem D1 and D2 ATPase domains and N- and C-terminal regions that function as adaptor protein binding domains. p97/VCP is directed to its many different functional pathways by associating with various adaptor proteins.

A study of the spatial protein organization of the postsynaptic density isolated from porcine cerebral cortex and cerebellum.

Postsynaptic density (PSD) is a protein supramolecule lying underneath the postsynaptic membrane of excitatory synapses and has been implicated to play important roles in synaptic structure and function in mammalian central nervous system. Here, PSDs were isolated from two distinct regions of porcine brain, cerebral cortex and cerebellum. SDS-PAGE and Western blotting analyses indicated that cerebral and cerebellar PSDs consisted of a similar set of proteins with noticeable differences in the abundance of various proteins between these samples.

Study on dispersion-induced phase noise in an optical OFDM radio-over-fiber system at 60-GHz band.

While coherency between an RF-tone and OFDM signals in RoF systems at 60 GHz is de-correlated by fiber dispersion, both phase rotation term (PRT) on each subcarrier and inter-carrier interference (ICI) between subcarriers are induced at a receiver. We analytically calculate the powers of PRT and ICI under different parameters, such as subcarrier number, modulation format, laser linewidth and transmission distance. Moreover, dispersion-induced ICI is shown to be non-Gaussian distributed by its kurtosis, and its distribution depends on system parameters.

De-novo identification of PPARgamma/RXR binding sites and direct targets during adipogenesis.

Background: The pathophysiology of obesity and type 2 diabetes mellitus is associated with abnormalities in endocrine signaling in adipose tissue and one of the key signaling affectors operative in these disorders is the nuclear hormone transcription factor peroxisome proliferator-activated receptor-gamma (PPARgamma). PPARgamma has pleiotropic functions affecting a wide range of fundamental biological processes including the regulation of genes that modulate insulin sensitivity, adipocyte differentiation, inflammation and atherosclerosis. To date, only a limited number of direct targets for PPARgamma have been identified through research using the well established pre-adipogenic cell line, 3T3-L1.

A precisely regulated gene expression cassette potently modulates metastasis and survival in multiple solid cancers.

Successful tumor development and progression involves the complex interplay of both pro- and anti-oncogenic signaling pathways. Genetic components balancing these opposing activities are likely to require tight regulation, because even subtle alterations in their expression may disrupt this balance with major consequences for various cancer-associated phenotypes. Here, we describe a cassette of cancer-specific genes exhibiting precise transcriptional control in solid tumors.

Computational analysis and modeling of genome-scale avidity distribution of transcription factor binding sites in chip-pet experiments.

Advances in high-throughput technologies, such as ChIP-chip and ChIP-PET (Chromatin Immuno-Precipitation Paired-End diTag), and the availability of human and mouse genome sequences now allow us to identify transcription factor binding sites (TFBS) and analyze mechanisms of gene regulation on the level of the entire genome. Here, we have developed a computational approach which uses ChIP-PET data and statistical modeling to assess experimental noise and identify reliable TFBS for c-Myc, STAT1 and p53 transcription factors in the human genome. We propose a mixture probabilistic model and develop computational programs for Monte Carlo simulation of ChIP-PET data to define the background noise of the sequence clustering and to identify the probability function of specific DNA-protein binding in the eukaryotic genome.

The airborne metagenome in an indoor urban environment.

The indoor atmosphere is an ecological unit that impacts on public health. To investigate the composition of organisms in this space, we applied culture-independent approaches to microbes harvested from the air of two densely populated urban buildings, from which we analyzed 80 megabases genomic DNA sequence and 6000 16S rDNA clones. The air microbiota is primarily bacteria, including potential opportunistic pathogens commonly isolated from human-inhabited environments such as hospitals, but none of the data contain matches to virulent pathogens or bioterror agents.

The use of multiple displacement amplification to amplify complex DNA libraries.

Complex libraries for genomic DNA and cDNA sequencing analyses are typically amplified using bacterial propagation. To reduce biases, large numbers of colonies are plated and scraped from solid-surface agar. This process is time consuming, tedious and limits scaling up.

Convergence of phase fluctuation induced by intrachannel four-wave mixing in differential phase-shift keying transmission systems via phase fluctuation averaging.

This work investigates the effect of phase fluctuation averaging on phase fluctuation induced by intrachannel four-wave mixing (IFWM) in highly dispersed differential phase-shift keying transmission systems. Through repeatedly averaging the phase fluctuations of adjacent pulses, a simple analytical model and numerical simulation revealed that the IFWM-induced differential phase fluctuation is suppressed and convergent, even after an ultralong transmission. The influence of averaging the phase fluctuations on the bit error rate is also evaluated by the semianalytical method.

A genomics approach to understanding host response during dengue infection.

Dengue infection results in a wide clinical spectrum, ranging from asymptomatic, through fever (DF), to the life threatening complications haemorrhagic fever (DHF) and shock syndrome (DSS). Although we now understand that factors such as repeat infections and the type or magnitude of the host response are important in determining severity, the mechanisms of these actions remain largely unknown. Understanding this host-pathogen interaction may enable outcome prediction and new therapy options.