Publications by authors named "Chenglin Deng"

Topological phases are robust against weak perturbations, but break down when disorder becomes sufficiently strong. However, moderate disorder can also induce topologically nontrivial phases. Thouless pumping, as a (1+1)D counterpart of the integer quantum Hall effect, is one of the simplest manifestations of topology.

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Background: Chikungunya virus (CHIKV) is a mosquito-borne alphavirus that is responsible for Chikungunya fever, which is characterized by fever, rash, and debilitating polyarthralgia. Since its re-emergence in 2004, CHIKV has continued to spread to new regions and become a severe health threat to global public. Development of safe and single dose vaccines that provide durable protection is desirable to control the spread of virus.

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  • High-order topological phases involve systems with unique multi-dimensional properties, showing localized states on lower-dimensional boundaries and can be used in topological pumping experiments.
  • The research demonstrates the creation of corner-localized states on a lattice of superconducting qubits using a process that modifies quantum interactions adiabatically.
  • The team also examines how these topological pumps handle different types of disorder, providing insights into their stability and encouraging further exploration of high-order topological phases in quantum systems.
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As emerging and re-emerging pathogens, filoviruses, especially Ebola virus (EBOV), pose a great threat to public health and require sustained attention and ongoing surveillance. More vaccines and antiviral drugs are imperative to be developed and stockpiled to respond to unpredictable outbreaks. Virus-like vesicles, generated by alphavirus replicons expressing homogeneous or heterogeneous glycoproteins (GPs), have demonstrated the capacity of self-propagation and shown great potential in vaccine development.

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• The recombinant VSV-EBOV is highly lethal to IFNα/β/γ R mice. • The infected mice exhibit hyperviremia and distinct splenohepatic lesions. • Virus replicon particle vaccine can protect all IFNα/β/γ R mice against VSV-EBOV lethal challenge.

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  • * A new high-content antiviral screening system was created to test a library of 1042 natural compounds against EV-A71, a virus that causes HFMD.
  • * Fangchinoline (FAN), a natural compound found to inhibit EV-A71 and other enteroviruses, targets the early stages of the virus life cycle and may lead to broader antiviral treatments.
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  • SARS-CoV-2 continues to evolve despite vaccination efforts, making the development of affordable vaccines for the Omicron variant crucial.
  • A study tested a vaccine using a live Newcastle disease virus that expresses Omicron's spike protein in hamsters, administered either intranasally (IN) or intramuscularly (IM).
  • Results showed that the vaccine elicited strong antibody responses and provided complete protection against the Omicron BA.1 variant, suggesting it could be a viable nasal vaccination option against similar strains.
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  • - The study focuses on using a 43-qubit superconducting quantum processor, called Chuang-tzu, to simulate exotic topological phases of quantum matter and explore their properties.
  • - Researchers engineered diagonal Aubry-André-Harper models and successfully demonstrated the Hofstadter butterfly energy spectrum, along with experimental verification of topological zero modes, which had not been observed before.
  • - The significant number of qubits enables the capture of complex topological features in quantum systems, paving the way for advanced simulations of quantum topological systems using noisy intermediate-scale quantum (NISQ) technology.
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The quantum Hall effect, fundamental in modern condensed matter physics, continuously inspires new theories and predicts emergent phases of matter. Here we experimentally demonstrate three types of Chern insulators with synthetic dimensions on a programable 30-qubit-ladder superconducting processor. We directly measure the band structures of the 2D Chern insulator along synthetic dimensions with various configurations of Aubry-André-Harper chains and observe dynamical localisation of edge excitations.

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Alphaviruses, which contain a variety of mosquito-borne pathogens, are important pathogens of emerging/re-emerging infectious diseases and potential biological weapons. Currently, no specific antiviral drugs are available for the treatment of alphaviruses infection. For most highly pathogenic alphaviruses are classified as risk group-3 agents, the requirement of biosafety level 3 (BSL-3) facilities limits the live virus-based antiviral study.

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West Nile virus (WNV), an arthropod-borne flavivirus, can cause severe symptoms, including encephalitis, and death, posing a threat to public health and the economy. However, there is still no approved treatment or vaccine available for humans. Here, we developed a novel vaccine platform based on a classical insect-specific flavivirus (cISF) YN15-283-02, which was derived from Culicoides.

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COVID-19 has become a global public health crisis since its outbreak in China in December 2019. Currently there are few clinically effective drugs to combat SARS-CoV-2 infection. The main protein (M), papain-like protease (PL) and RNA-dependent RNA polymerase (RdRp) of SARS-CoV-2 are involved in the viral replication, and might be prospective targets for anti-coronavirus drug development.

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With the explosive emergence of Zika virus (ZIKV) and the consequent devastating fetal malformations in infected expectant women, a safe and effective vaccine is urgently needed. Here, using our established NS1 trans-complementation system, we generated high titer of replication-defective ZIKV with NS1 deletion (ZIKV-ΔNS1) in the BHK-21 cell line stably expressing NS1 (BHK). NS1 deletion of ZIKV-ΔNS1 was stably maintained as no replicative virus was found in naïve BHK-21 cells after continuous passaging of ZIKV-ΔNS1 in BHK cells.

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  • Oncolytic viruses, like WNV-poly(A), selectively replicate in cancer cells and enhance the immune response, making them promising for cancer therapy.
  • WNV-poly(A) is a live attenuated vaccine that effectively targets multiple cancer types, kills tumor cells while sparing normal cells, and activates immune responses through dendritic cells and CD8+ T cells.
  • Experiments show that WNV-poly(A) significantly delays tumor progression in various cancer models, highlighting its potential as a new and effective treatment option for metastatic and recurrent tumors.
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  • The immunostained plaque assay uses specific antibodies to bind viral antigens, allowing for the detection of virus infectivity in cases where traditional staining methods fail.
  • This technique is particularly useful for titrating viruses like wild-type West Nile virus (WNV-WT) and a replication-defective variant (WNV-ΔNS1).
  • The method enhances the ability to quantify viral loads accurately, improving research on viruses that do not form typical plaques.
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COVID-19 caused by SARS-CoV-2 has posed a significant threat to global public health since its outbreak in late 2019. Although there are a few drugs approved for clinical treatment to combat SARS-CoV-2 infection currently, the severity of the ongoing global pandemic still urges the efforts to discover new antiviral compounds. As the viral spike (S) protein plays a key role in mediating virus entry, it becomes a potential target for the design of antiviral drugs against COVID-19.

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() ST was isolated from De'ang pickled tea in Yunnan Province, China. The genomes of strain ST were fully sequenced and analyzed using the PacBio RS II sequencing system. Our previous study has shown that ST is a potential probiotic strain.

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  • Researchers found that a new Chikungunya virus particle (ΔC-CHIKV) was infectious and potentially useful as a live vaccine, but its low production rate limited commercial development.
  • In the current study, they successfully propagated a chimeric version (VEEV-ΔC-CHIKV) in Vero cells, enhancing yield via adaptive mutations in the viral envelope proteins.
  • The modified viral particle showed promise as a safe and effective vaccine, providing protection to mice with just one immunization, which could lead to viable vaccine options against Chikungunya virus.
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The extremely high transmission rate of SARS-CoV-2 and severe cases of COVID-19 pose the two critical challenges in the battle against COVID-19. Increasing evidence has shown that the viral spike (S) protein-driven syncytia may be responsible for these two events. Intensive attention has thus been devoted to seeking S-guided syncytium inhibitors.

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Japanese encephalitis virus (JEV), an important neurotropic pathogen, belongs to the genus of the family and has caused huge threat to public health. It is still obscure regarding the functions of stem-loop (SL) and dumbbell (DB) domains of JEV 3' UTR in viral replication and virulence. In the current study, using the infectious clone of JEV SA14 strain as a backbone, we constructed a series of deletion mutants of 3' UTR to investigate their effects on virus replication.

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The lung is the prophylaxis target against SARS-CoV-2 infection, and neutralizing antibodies are a leading class of biological products against various infectious viral pathogen. In this study, we develop a safe and cost-effective platform to express neutralizing antibody in the lung with replicating mRNA basing on alphavirus replicon particle (VRP) delivery system, to prevent SARS-CoV-2 infections. First, a modified VEEV replicon with two subgenomic (sg) promoters was engineered to translate the light and heavy chains of antibody simultaneously, for expression and assembly of neutralizing anti-SARS-CoV-2 antibody CB6.

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