Publications by authors named "Charlotte Davidson"

The potato mitogenome is complex and to understand various biological functions and nuclear-cytoplasmic interactions, it is important to characterize its gene content and structure. In this study, the complete mitogenome sequences of nine diploid potato clones along with a diploid Solanum okadae clone were characterized. Each mitogenome was assembled and annotated from Pacific Biosciences (PacBio) long reads and 10X genomics short reads.

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Potato ( L.) is the world's fourth most important food crop and essential for global food security. The potato chloroplast genomes, the plastomes, are highly conserved and are largely studied for their maternal lineages.

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Tubers are vegetative reproduction organs formed from underground extensions of the plant stem. Potato tubers are harvested and stored for months. Storage under cold temperatures of 2-4 °C is advantageous for supressing sprouting and diseases.

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Article Synopsis
  • Kleb. is a pathogenic fungus that leads to wilting and early dying in potatoes. Genetic mapping of resistance identified a major QTL on chromosome 5 linked to maturity and tuberization, and another QTL on chromosome 9 that interacts significantly with the first.
  • The resistance alleles StCDF1.1 and StCDF1.3 were sequenced, showing an interaction with the fungal pathogen, while eQTL analysis revealed key genes related to chloroplast functions and fungal defense.
  • Overall, the results indicate that the identified genetic pathways play a crucial role in enhancing fungal defense and influencing tuberization timing to mitigate early dying caused by the fungus.
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Steroidal glycoalkaloids (SGAs) are major secondary metabolites constitutively produced in cultivated potato Solanum tuberosum, and α-solanine and α-chaconine are the most abundant SGAs. SGAs are toxic to humans at high levels but their role in plant protection against pests and pathogens is yet to be established. In this study, levels of SGAs in potato were reduced by RNA interference (RNAi)-mediated silencing of GLYCOALKALOID METABOLISM 4 (GAME4)-a gene encoding cytochrome P450, involved in an oxidation step in the conversion of cholesterol to SGA aglycones.

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