Publications by authors named "ChaoJie Xu"

Targeted protein degradation has become a notable drug development strategy, but its application has been limited by the dependence on protein-based chimeras with restricted genetic manipulation capabilities. The use of long non-coding RNAs (lncRNAs) has emerged as a viable alternative, offering interactions with cellular proteins to modulate pathways and enhance degradation capabilities. Here we introduce a strategy employing artificial lncRNAs (alncRNAs) for precise targeted protein degradation.

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  • Fluorescent dye films are important for technologies like OLEDs and wireless communications, but their performance is often limited by issues like fluorescence trapping from total internal reflection.
  • This study proposes a new method of placing dye films on the back of quartz substrates instead of directly on metasurfaces, leading to a 2.5-fold increase in photoluminescence and better emission uniformity.
  • The improved efficiency comes from redirecting trapped fluorescence into free space, which enhances the potential for designing better luminescent devices.
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Importance: Successful needle puncture of the renal collecting system is a critical but difficult procedure in percutaneous nephrolithotomy (PCNL). Although fluoroscopy and ultrasound are the standard imaging techniques to guide puncture during PCNL, both have known limitations.

Objective: To assess the feasibility and safety of a new navigation system for needle puncture in ultrasound-guided PCNL.

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Conjugated polymers are promising candidates for molecular wires in nanoelectronics, with flexibility in mechanics, stability in chemistry and variety in electrical conductivity. Polyene, as a segment of polyacetylene, is a typical conjugated polymer with straightforward structure and wide-range adjustable conductance. To obtain atomic scale understanding of charge transfer in polyene, we have measured the conductance of a single polyene-based molecular chain via lifting it up with scanning tunneling microscopy tip.

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On-surface synthesis provides tools to prepare low-dimensional supramolecular structures. Traditionally, reactive radicals are a class of single-electron species, serving as exceptional electron-withdrawing groups. On metal surfaces, however, such species are affected by conduction band screening effects that may even quench their unpaired electron characteristics.

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Chitosan has been studied as an immunomodulator, but few studies have used chitosan derivatives as adjuvants alone. After a preliminary study, we found that nanoparticles prepared from chitosan derivatives had better cellular immune activity when used as an adjuvant. Therefore, animal experiments were conducted to further investigate the performance and mechanism of these nanoparticles as immune adjuvants.

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Background: Mounting studies indicate that oxidative stress (OS) significantly contributes to tumor progression. Our study focused on bladder urothelial cancer (BLCA), an escalating malignancy worldwide that is growing rapidly. Our objective was to verify the predictive precision of genes associated with overall survival (OS) by constructing a model that forecasts outcomes for bladder cancer and evaluates the prognostic importance of these genetic markers.

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Two-dimensional (2D) tessellation of organic species acquired increased interest recently because of their potential applications in physics, biology, and chemistry. Herein, we successfully synthesized the chiral distorted Kagome lattice 3 (333) with bicomponent precursors on Ag(111). Scanning tunneling microscopy and density functional calculation studies reveal that the networks are formed by multiple intermolecular hydrogen bonds.

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We propose a new method for fabricating hybrid metasurfaces by combining Mie and plasmonic resonances. Our approach involves obtaining an ultrasmooth gold film and separately structuring monocrystalline silicon (c-Si) nanoantenna arrays, which are then wet-transferred and finally immobilized onto the gold film. The experimental and simulation analysis reveals the importance of the native oxide layer of Si and demonstrates fascinating dispersion curves with nanogap resonances and bound states in the continuum.

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Optical bound states in the continuum (BICs) offer strong interactions with quantum emitters and have been extensively studied for manipulating spontaneous emission, lasing, and polariton Bose-Einstein condensation. However, the out-coupling efficiency of quasi-BIC emission, crucial for practical light-emitting devices, has received less attention. Here, we report an adaptable approach for enhancing quasi-BIC emission from a resonant monocrystalline silicon (c-Si) metasurface through lattice and multipolar engineering.

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High labor costs and labor shortages are limiting factors affecting the tea industry in Anhui Province. Thus, exploiting the full mechanization of shoot harvesting is an urgent task in the tea industry. Tea quality is greatly influenced by the integrity rate of tea leaves; therefore, it is important to choose tea cultivars suitable for machine picking.

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Background: Anoikis is a programmed cell death process that was proven to be associated with cancer. Uroepithelial carcinoma of the bladder (BLCA) is a malignant disease of the urinary tract and has a strong metastatic potential. To determine whether anoikis-associated genes can predict the prognosis of BLCA accurately, we evaluated the prognostic value of anoikis-associated genes in BLCA and constructed the best model to predict prognosis.

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Background: With the development of early diagnosis and treatment, the second primary malignancy (SPM) attracts increasing attention. The second primary prostate cancer (spPCa) is an important class of SPM, but remains poorly understood.

Methods: We retrospectively analyzed 3,322 patients with spPCa diagnosed between 2004 and 2015 in the Surveillance, Epidemiology, and End Results (SEER) database.

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  • The study focuses on the challenges of treating platinum-resistant recurrent ovarian cancer (PROC) and how the tumor microenvironment, particularly macrophages, may influence cancer progression and patient outcomes.
  • Researchers analyzed gene expression data from ovarian cancer samples to investigate the relationship between specific macrophage phenotypes (such as M1 and M2) and patient survival rates.
  • Findings suggest that higher levels of the macrophage M1 phenotype, which is associated with a better prognosis, may be regulated by IL-6, indicating a potential biomarker for predicting patient outcomes in PROC.
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  • - This study investigates the relationship between fatty acid metabolism-related genes (FAMRG) and ovarian cancer prognosis, particularly focusing on how these genes may influence cancer metastasis to the omentum, an organ made up of adipose tissue.
  • - Researchers analyzed transcriptomic data from ovarian cancer and normal tissues, developed a predictive model using LASSO regression, and assessed gene functions through various bioinformatic analyses, identifying 125 differentially expressed genes (DEGs), which contributed to a prognostic model.
  • - The results showed that a risk score from the identified genes is a significant prognostic factor for ovarian cancer survival and that immune cell infiltration patterns vary with risk levels; pathways related to cancer and adipocytokine signaling also differ
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  • On Au(111), immediate [2 + 2] and [2 + 2 + 2] cycloadditions occur post-debromination, while Ag(111) leads to a uniform [2 + 2] result through the observation of several MOHs after thermal annealing.
  • Scanning tunneling microscopy (STM) and bond-resolved atomic force microscopy (BR-AFM) are used to clarify the chemical structures of intermediates, shedding
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The use of new long noncoding RNAs (lncRNAs) as biotechnological or therapeutic tools is still in its infancy, despite recent efforts to uncover their involvement in various biological processes including mRNA translation. An important question is whether lncRNA functional elements can be used to target translation of mRNAs of interest by incorporating the RNA-targeting CRISPR tools. The CRISPR/dCasRx-SINEB2 technology was developed in this research by coupling the sgRNA of a catalytically inactive Type VI-D Cas13 enzyme (CasRx) to an integrated SINEB2 domain of uchl1 lncRNA that promotes the translation of targeted mRNA.

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  • - The study explores how the tumor microenvironment (TME), particularly M1 macrophages, affects the progression of bladder urothelial carcinoma (BLCA) and identifies 111 M1 macrophage-related genes that could help in developing adjuvant therapies.
  • - Utilizing data from TCGA and GEO, researchers applied the CIBERSORT algorithm and weighted gene co-expression network analysis (WGCNA) to create a risk score (RS) model based on significant M1 macrophage genes (FBXO6, OAS1, TMEM229B) for predicting patient outcomes in BLCA.
  • - The findings suggest that patients classified in the low-risk group (LRG) responded better to certain immunotherapies and
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  • On-surface synthesis enables the creation of low-dimensional functional materials, with the activation energies influenced by the metal surfaces the precursor molecules are attached to.
  • Research comparing desulfonylation homocoupling reactions on Au(111) and Ag(111) revealed that Au(111) results in lower activation energy due to its stronger molecular interactions compared to Ag(111).
  • The study highlights how different molecule-substrate interactions affect reaction barriers, despite silver being more reactive than gold, introducing new insights into on-surface chemical reactions.
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Growing evidence suggests that infiltrating neutrophils are key players in hepatocellular carcinoma (HCC) tumor progression. However, a comprehensive analysis of the biological roles of neutrophil infiltration and related genes in clinical outcomes and immunotherapy is lacking. HCC samples were obtained from the TCGA and GEO databases.

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Background: With advances in early diagnosis and treatment, the number of cancer survivors continues to grow, and more and more cancer survivors face the threat of second primary cancer (SPM). Second primary pancreatic ductal adenocarcinoma (spPDAC) is an important subclass of SPM, but its prognostic characteristics are poorly understood.

Methods: A total of 5,439 spPDAC samples and 67,262 primary pancreatic ductal adenocarcinoma (pPDAC) samples were extracted from the SEER database for this study.

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  • The study developed nanoparticles using positive quaternized chitosan and negative mucopolysaccharides, resulting in stable structures sized between 336.2-424.5 nm with good encapsulation efficiency (68.77% and 64.89%) and low endotoxin levels.
  • The nanoparticles significantly enhanced immune responses in DCS cells and promoted immunoglobulin secretion (IgG1 and IgG2) in BALB/C mice, along with increased expression of immune factor genes.
  • Tissue section tests indicated that these nanoparticles are safe for the body.
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Numerous studies have shown that infiltrating eosinophils play a key role in the tumor progression of bladder urothelial carcinoma (BLCA). However, the roles of eosinophils and associated hub genes in clinical outcomes and immunotherapy are not well known. BLCA patient data were extracted from the TCGA database.

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Background: Numerous studies have found that infiltrating M2 macrophages play an important role in the tumor progression of lung adenocarcinoma (LUAD). However, the roles of M2 macrophage infiltration and M2 macrophage-related genes in immunotherapy and clinical outcomes remain obscure.

Methods: Sample information was extracted from TCGA and GEO databases.

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Endotoxemia is mainly caused by a massive burst of inflammatory cytokines as a result of lipopolysaccharide (LPS) invasion. Chitooligosaccharides (COS) is expected to be a potential drug for relieving endotoxemia due to its anti-inflammatory properties. However, the structural parameters of COS are often ambiguous, and the effect of degree of acetylation (DA) of COS on its anti-inflammatory remains unknown.

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