Publications by authors named "Chang Ye"

Objective: The International Diabetes Federation recently endorsed a 1-h oral glucose tolerance test (OGTT) as more convenient than the conventional 2-h OGTT. In practice, women with hyperglycemia in pregnancy are advised to undergo a 2-h OGTT within 6 months after delivery, but this test is often not completed, partly owing to its inconvenience for busy mothers. Recognizing the potential advantage of the 1-h OGTT in this setting, we sought to compare 1-h and 2-h OGTT glucose measurements at 3 months postpartum as predictors of dysglycemia (prediabetes/diabetes) over the first 5 years postpartum.

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Elevated glucose metabolism triggers two primary processes that lead to β-cell depolarization and insulin secretion: the closure of ATP-sensitive K channels via ATP-dependent mechanisms and the activation of mechanosensitive channels (MSCs) due to cell swelling. However, the identity of these MSCs remains unclear. In this study, we found that TMEM63B is a stretch-activated cation channel (SAC) crucial for regulating insulin secretion in response to elevated glucose levels.

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Pseudouridine (Ψ) is the most abundant RNA modification, yet studies of Ψ have been hindered by a lack of robust methods to profile comprehensive Ψ maps. Here we utilize bisulfite-induced deletion sequencing to generate transcriptome-wide Ψ maps at single-base resolution across various plant species. Integrating ribosomal RNA, transfer RNA and messenger RNA Ψ stoichiometry with mRNA abundance and polysome profiling data, we uncover a multilayered regulation of translation efficiency through Ψ modifications.

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Purpose: Patients experience severe physical trauma every year. However, studies on survivors' experiences after severe injury are limited. Previous studies have mainly focused on time spans of trauma treatment.

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Article Synopsis
  • A study was conducted to create a standardized scale for evaluating the need for specialized rehabilitation in trauma patients, addressing the issue of improper referrals to medical institutions.
  • The scale was developed through a systematic review of literature and collaboration among experts in trauma care, resulting in a discharge-planning checklist validated using data from past trauma patients.
  • Validation results showed that the checklist is effective in predicting appropriate rehabilitation facility discharges, offering a practical tool to enhance trauma survivors' recovery by ensuring access to suitable rehab services.
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Microfluidic-based nucleic acid testing (NAT) has been proven as an alternative approach for in-situ and rapid NA detection. However, these on-chip methods still require complex peripherals, which contradict the purpose of point-of-care (POC) applications. One of the major challenges is the integration of NA purification and amplification in a miniaturized setup with high mass and heat transfer efficiency.

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As a unicellular eukaryote, the budding yeast Saccharomyces cerevisiae strikes a unique balance between biological complexity and experimental tractability, serving as a long-standing classic model for both basic and applied studies. Recently, S. cerevisiae further emerged as a leading system for studying natural diversity of genome evolution and its associated functional implication at population scales.

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  • The study evaluates the current state of multidisciplinary treatment for severe trauma patients in Korea, highlighting the historical focus on reducing mortality rather than comprehensive care.
  • An online questionnaire revealed that only a small percentage of hospitals had multidisciplinary meetings, and there were significant delays in patient transfers to rehabilitation facilities due to financial constraints and other collaboration challenges.
  • Despite recognizing the importance of multidisciplinary care, trauma specialists emphasized the need for an improved system to better support the recovery and reintegration of trauma patients into society.
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  • Multiplexed flow cytometry is a powerful tool for identifying multiple biological markers but traditionally requires expensive multichannel lasers and detectors, limiting its use in smaller assays.
  • A new technique using acoustic streaming allows for sheathless flow of microbeads of different sizes, enabling effective particle discrimination and quantification with only a single detector.
  • This method was successfully validated with a multiplex assay for proteins related to acute myocardial infarction, suggesting it could lead to affordable and on-site biomarker detection.
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In this study, four franchetine-type diterpenoid alkaloids (1-4) were isolated from Aconitum sinoaxillare, and fourteen diverse franchetine analogs (5-18) were synthesized. Compounds 1, 2, 7 and 16 exhibited stronger inhibitory effects on NO production when compared to celecoxib. Among them, compound 1 had the best inhibitory effect on iNOS and COX-2 inflammatory proteins.

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This trial targeted to analyze the effects of different doses of tirofiban combined with dual antiplatelet drugs on platelet indices, vascular endothelial function, and major adverse cardiovascular events (MACE) in patients with acute ST-segment elevated myocardial infarction (STEMI) undergoing percutaneous coronary intervention (PCI). A total of 180 patients with STEMI who underwent PCI were divided into Group A, Group B, and Group C (60 cases per group). Group A was given conventional medication, and Groups B and C were given a standard dose (10 μg/kg) and a high dose (20 μg/kg) of tirofiban on the basis of Group A, respectively.

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Introduction: Cervical cancer remains one of the most common gynecologic malignancies worldwide. A disproportionate burden of cases occurs in developing countries due to inadequate screening and treatment. Even among patients adequately treated, in the presence of locally advanced or recurrent disease, outcomes tend to be poor.

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Objective: Alleviation of unrecognized glucotoxicity, with resultant recovery of β-cell function, could amplify the glucose-lowering effect of pharmacotherapy and contribute to the variable therapeutic response observed among patients with type 2 diabetes (T2D). However, clinical evidence supporting this concept is lacking. Short-term intensive insulin therapy (IIT) can ameliorate glucotoxicity and improve β-cell function in early T2D.

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Fluxes in human copper levels recently garnered attention for roles in cellular signaling, including affecting levels of the signaling molecule cyclic adenosine monophosphate. We herein apply an unbiased temporal evaluation of the signaling and whole genome transcriptional activities modulated by copper level fluctuations to identify potential copper sensor proteins responsible for driving these activities. We find that fluctuations in physiologically relevant copper levels modulate EGFR signal transduction and activation of the transcription factor CREB.

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Article Synopsis
  • Cis-regulatory elements (CREs) play a critical role in gene expression, and accurately identifying them is essential for understanding gene regulation in cellular processes.
  • The study introduces a new technique, Kethoxal-Assisted Single-stranded DNA Assay for Transposase-Accessible Chromatin with Sequencing (KAS-ATAC-seq), which allows for precise measurement of ssDNA and the identification of transcriptional regulatory sequences, particularly Single-Stranded Transcribing Enhancers (SSTEs).
  • KAS-ATAC-seq was successfully applied to analyze CREs during mouse neural differentiation, showing its capability to identify functional CREs activated by retinoic acid treatment and suggesting future applications in gene regulation
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Our study explored the lateral export of macroalgae and seagrass to the deep sea of the Northern South China Sea (NSCS). Particulate organic carbon (POC) collected from a depth of 500 m off southwestern Taiwan (station T) and Dongsha Atoll (station K) underwent environmental DNA (eDNA) and stable isotope assays. Metabarcoding using 18S V9 rDNA revealed lateral export of macrophyte detritus in NSCS.

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Supramolecules are considered as promising materials for volatile organic compounds (VOCs) sensing applications. The proper understanding of the sorption process taking place in host-guest interactions is critical in improving the pattern recognition of supramolecules-based sensing arrays. Here, we report a novel approach to investigate the dynamic host-guest recognition process by employing a bulk acoustic wave (BAW) resonator capable of producing multiple oscillation amplitudes and simultaneously recording multiple responses to VOCs.

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Article Synopsis
  • Pseudouridine (Ψ) is a common RNA modification found in various types of RNA, and understanding its function requires accurate detection methods.
  • A traditional method uses N-cyclohexyl-'-β-(4-methylmorpholinium)ethylcarbodiimide (CMC), but it has drawbacks like RNA degradation and time-consuming processes.
  • The new BIHIND method allows for efficient detection and quantification of Ψ sites in RNA, and can be integrated with quantitative PCR and next-generation sequencing for enhanced analysis.
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Lab-on-a-chip systems (LOCs), characterized by their high sensitivity, low sample consumption, and portability, have significantly advanced the field of on-site testing. Despite the evolution of integrated LOCs from qualitative to quantitative analyses, on-chip full integration of sample preparation, purification, and multiplexed detection remains a challenge. Here, we propose a strategy for the heterogeneous integration of a set of complementary metal oxide semiconductor-compatible devices including acoustic resonator, thin-film resistors, and temperature/photosensors as a new type of LOC for nucleic acid testing (NAT).

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Do motor patterns of object lifting movements change as a result of ageing? Here we propose a methodology for the characterization of these motor patterns across individuals of different age groups. Specifically, we employ a bimanual grasp-lift-replace protocol with younger and older adults and combine measurements of muscle activity with grip and load forces to provide a window into the motor strategies supporting effective object lifts. We introduce a tensor decomposition to identify patterns of muscle activity and grip-load force ratios while also characterizing their temporal profiles and relative activation across object weights and participants of different age groups.

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N-methyladenosine (mA) plays critical roles in regulating mRNA metabolism. However, comprehensive mA methylomes in different plant tissues with single-base precision have yet to be reported. Here, we present transcriptome-wide mA maps at single-base resolution in different tissues of rice and Arabidopsis using mA-SAC-seq.

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The N-methyladenosine (mA) RNA modification is an important regulator of gene expression. mA is deposited by a methyltransferase complex that includes methyltransferase-like 3 (METTL3) and methyltransferase-like 14 (METTL14). High levels of METTL3/METTL14 drive the growth of many types of adult cancer, and METTL3/METTL14 inhibitors are emerging as new anticancer agents.

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Article Synopsis
  • mA (methyl adenosine) is a common RNA modification found in various types of RNA, crucial for translation processes, and is created by specific methyltransferase enzymes.
  • It significantly affects RNA structure by blocking certain base-pairing and can lead to mutations during reverse transcription.
  • The study introduces red-mA-seq, a new sequencing method that enhances detection of mA by using a reduction process, which successfully identified both known and novel mA sites in human small RNA.
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