Publications by authors named "Carsten Eickhoff"

Background: Molecular tumor boards (MTBs) require intensive manual investigation to generate optimal treatment recommendations for patients. Large language models (LLMs) can catalyze MTB recommendations, decrease human error, improve accessibility to care, and enhance the efficiency of precision oncology.

Objective: In this study, we aimed to investigate the efficacy of LLM-generated treatments for MTB patients.

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Background: For hospitalized patients, the discharge letter serves as a crucial source of medical information, outlining important discharge instructions and health management tasks. However, these letters are often written in professional jargon, making them difficult for patients with limited medical knowledge to understand. Large language models, such as GPT, have the potential to transform these discharge summaries into patient-friendly letters, improving accessibility and understanding.

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Multimodal models have become increasingly important as they surpass single-modality approaches on diverse tasks ranging from question-answering to disease diagnosis. Despite the importance of multimodal learning, existing efforts focus on vision-language applications, where the number of modalities rarely exceeds four (images, text, audio, video). However, data in healthcare domain, may include many more modalities like X-rays, PET scans, MRIs, genetic screening, genomic data, and clinical notes, creating a need for both efficient and accurate data integration.

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Background: Venovenous extracorporeal membrane oxygenation (VV-ECMO) is associated with acute brain injury (ABI), including central nervous system (CNS) ischemia (defined as ischemic stroke or hypoxic-ischemic brain injury [HIBI]) and intracranial hemorrhage (ICH). Data on prediction models for neurologic outcomes in VV-ECMO are limited.

Methods: We analyzed adult (age ≥18 years) VV-ECMO patients in the Extracorporeal Life Support Organization (ELSO) Registry (2009-2021) from 676 centers.

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Background/significance: Alcohol use carries significant morbidity and mortality, yet accurate identification of alcohol use disorder (AUD) remains a multi-layered problem for both researchers and clinicians.

Objective: To fine-tune a language model to AUD in the clinical narrative and to detect AUDs not accounted for by ICD-9 coding in the MIMIC-III database.

Materials And Methods: We applied clinicalBERT to unique patient discharge summaries.

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Article Synopsis
  • Remote patient management can enhance heart failure prognosis, but current methods for monitoring require too many resources for widespread use.
  • A study developed a machine learning model to create a risk score predicting heart failure hospitalizations within seven days, and this model performed better than traditional methods in identifying at-risk patients.
  • By focusing daily review efforts on just the top third of patients with the highest risk scores, the model could detect 95% of imminent hospitalizations, highlighting its potential to streamline monitoring and intervention processes.
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Article Synopsis
  • * We analyzed data from 35,855 adults who received ECMO between 2009 and 2021, finding that 7.7% experienced acute brain injuries. Various machine learning algorithms were used to evaluate predictive accuracy, with area under the curve values indicating moderate predictive capability.
  • * Key factors linked to an increased risk of brain injury included longer ECMO duration, higher pump flow rates, and elevated oxygen levels during treatment, emphasizing the need for careful monitoring and management of these
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Patients in an Intensive Care Unit (ICU) are closely and continuously monitored, and many machine learning (ML) solutions have been proposed to predict specific outcomes like death, bleeding, or organ failure. Forecasting of vital parameters is a more general approach to ML-based patient monitoring, but the literature on its feasibility and robust benchmarks of achievable accuracy are scarce. We implemented five univariate statistical models (the naïve model, the Theta method, exponential smoothing, the autoregressive integrated moving average model, and an autoregressive single-layer neural network), two univariate neural networks (N-BEATS and N-HiTS), and two multivariate neural networks designed for sequential data (a recurrent neural network with gated recurrent unit, GRU, and a Transformer network) to produce forecasts for six vital parameters recorded at five-minute intervals during intensive care monitoring.

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Background: Although history taking is fundamental for diagnosing medical conditions, teaching and providing feedback on the skill can be challenging due to resource constraints. Virtual simulated patients and web-based chatbots have thus emerged as educational tools, with recent advancements in artificial intelligence (AI) such as large language models (LLMs) enhancing their realism and potential to provide feedback.

Objective: In our study, we aimed to evaluate the effectiveness of a Generative Pretrained Transformer (GPT) 4 model to provide structured feedback on medical students' performance in history taking with a simulated patient.

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Background: Diagnostic errors pose significant health risks and contribute to patient mortality. With the growing accessibility of electronic health records, machine learning models offer a promising avenue for enhancing diagnosis quality. Current research has primarily focused on a limited set of diseases with ample training data, neglecting diagnostic scenarios with limited data availability.

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Objective: Microwave lung ablation (MWA) is a minimally invasive and inexpensive alternative cancer treatment for patients who are not candidates for surgery/radiotherapy. However, a major challenge for MWA is its relatively high tumor recurrence rates, due to incomplete treatment as a result of inaccurate planning. We introduce a patient-specific, deep-learning model to accurately predict post-treatment ablation zones to aid planning and enable effective treatments.

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Background: Patients with rare and complex diseases often experience delayed diagnoses and misdiagnoses because comprehensive knowledge about these diseases is limited to only a few medical experts. In this context, large language models (LLMs) have emerged as powerful knowledge aggregation tools with applications in clinical decision support and education domains.

Objective: This study aims to explore the potential of 3 popular LLMs, namely Bard (Google LLC), ChatGPT-3.

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Article Synopsis
  • The study aimed to assess if machine learning can predict acute brain injury (ABI) in patients on venoarterial extracorporeal membrane oxygenation (VA-ECMO) and identify risk factors for such injuries.
  • Using data from a large international registry (2009-2021) involving 35,855 VA-ECMO patients, it was found that 7.7% experienced ABI, with certain features like longer ECMO duration and higher pump flow linked to increased risk.
  • For patients undergoing extracorporeal cardiopulmonary resuscitation (ECPR), 16.5% experienced ABI, and predictive accuracy for ABI was better than in VA-ECMO alone, with findings reinforcing the
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Article Synopsis
  • The study investigates the use of machine learning (ML) to predict acute brain injury (ABI) in patients undergoing venovenous extracorporeal membrane oxygenation (VV-ECMO), focusing on factors like CNS ischemia and intracranial hemorrhage (ICH).
  • Data was analyzed from 37,473 VV-ECMO patients, revealing that 7.1% experienced ABI, with machine learning algorithms providing moderate predictive accuracy (around 67-70% area under the curve) for different types of ABI.
  • Findings identified pre-ECMO cardiac arrest as the major risk factor for ABI, while longer ECMO duration and transplantation intentions were linked to a lower ABI risk, highlighting
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Pulmonary arterial hypertension (PAH) is characterized by endothelial cell (EC) dysfunction. There are no data from living patients to inform whether differential gene expression of pulmonary artery ECs (PAECs) can discern disease subtypes, progression and pathogenesis. We aimed to further validate our previously described method to propagate ECs from right heart catheter (RHC) balloon tips and to perform additional PAEC phenotyping.

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Background: The clinical applicability of machine learning predictions of patient outcomes following cardiac surgery remains unclear. We applied machine learning to predict patient outcomes associated with high morbidity and mortality after cardiac surgery and identified the importance of variables to the derived model's performance.

Methods: We applied machine learning to the Society of Thoracic Surgeons Adult Cardiac Surgery Database to predict postoperative hemorrhage requiring reoperation, venous thromboembolism (VTE), and stroke.

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In response to the 2023 George B. Moody PhysioNet Challenge, we propose an automated, unsupervised pre-training approach to boost the performance of models that predict neurologic outcomes after cardiac arrest. Our team, (BrownBAI), developed a model architecture consisting of three parts: a pre-processor to convert raw electroencephalograms (EEGs) into two-dimensional spectrograms, a three-layer convolutional neural network (CNN) encoder for unsupervised pre-training, and a time series transformer (TST) model.

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Objective: Delirium is associated with worse outcomes in patients with stroke and neurocritical illness, but delirium detection in these patients can be challenging with existing screening tools. To address this gap, we aimed to develop and evaluate machine learning models that detect episodes of post-stroke delirium based on data from wearable activity monitors in conjunction with stroke-related clinical features.

Design: Prospective observational cohort study.

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Miniaturized electrical stimulation (ES) implants show great promise in practice, but their real-time control by means of biophysical mechanistic algorithms is not feasible due to computational complexity. Here, we study the feasibility of more computationally efficient machine learning methods to control ES implants. For this, we estimate the normalized twitch force of the stimulated extensor digitorum longus muscle on n = 11 Wistar rats with intra- and cross-subject calibration.

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A steep increase in new drug applications has increased the overhead of writing technical documents such as medication guides. Natural language processing can contribute to reducing this burden. To generate medication guides from texts that relate to prescription drug labeling information.

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Objective: To identify underappreciated sepsis risk factors among children presenting to a pediatric emergency department (ED).

Methods: A retrospective observational study (2017-2019) of children aged 18 years and younger presenting to a pediatric ED at a tertiary care children's hospital with fever, hypotension, or an infectious disease International Classification of Diseases (ICD)-10 diagnosis. Structured patient data including demographics, problem list, and vital signs were extracted for 35,074 qualifying ED encounters.

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Objective: Alzheimer's disease (AD) is the most common neurodegenerative disorder with one of the most complex pathogeneses, making effective and clinically actionable decision support difficult. The objective of this study was to develop a novel multimodal deep learning framework to aid medical professionals in AD diagnosis.

Materials And Methods: We present a Multimodal Alzheimer's Disease Diagnosis framework (MADDi) to accurately detect the presence of AD and mild cognitive impairment (MCI) from imaging, genetic, and clinical data.

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