Publications by authors named "Carrie Pratt"

Anaerobic gut fungi (AGF, ) inhabit the alimentary tract of herbivores. Although strict anaerobes, studies have suggested their capacity to retain viability after various durations of air exposure. It is currently unclear whether AGF can actively grow, and not merely survive, in redox potentials (E) higher than those encountered in the herbivorous gut.

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Objectives: To determine whether a nurse practitioner and physician assistant (NP/PA)-led rapid staffing. Model in the cardiac surgical intensive care unit (ICU) can optimize resource utilization without compromising safety or increasing hospital length of stay (LoS).

Design: Retrospective observational cohort study comparing before-and-after implementation of an NP/PA-led rapid recovery pathway.

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Article Synopsis
  • Anaerobic gut fungi (AGF) are mostly found in the gastrointestinal tracts of herbivores, and while their role in mammals is well-known, their presence in non-mammals like tortoises is less documented.
  • Research indicates that tortoises host a unique AGF community with three new genera, estimated to have diverged from their ancestors over 104-112 million years ago, suggesting an early evolution of symbiosis between animals and AGF.
  • Tortoise-associated AGF show limited ability to metabolize plant materials due to fewer carbohydrate-active enzymes and reduced gene exchange compared to AGF from mammals, leading to a diminished capacity for breaking down cellulose.
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The anaerobic gut fungi (AGF) inhabit the alimentary tracts of herbivores. In contrast to placental mammals, information regarding the identity, diversity, and community structure of AGF in marsupials is extremely sparse. Here, we characterized AGF communities in 61 fecal samples from 10 marsupial species belonging to four families in the order Diprotodontia: Vombatidae (wombats), Phascolarctidae (koalas), Phalangeridae (possums), and Macropodidae (kangaroos, wallabies, and pademelons).

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The manuscript explores the secretion bacterial community of carrion and burying beetles of the central plains of North America. A core secretion microbiome of 11 genera is identified. The host subfamily, secretion type, and collection locality significantly affects the secretion microbiome.

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Despite their role in host nutrition, the anaerobic gut fungal (AGF) component of the herbivorous gut microbiome remains poorly characterized. Here, to examine global patterns and determinants of AGF diversity, we generate and analyze an amplicon dataset from 661 fecal samples from 34 mammalian species, 9 families, and 6 continents. We identify 56 novel genera, greatly expanding AGF diversity beyond current estimates (31 genera and candidate genera).

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The anaerobic gut fungi (AGF, ) represent a basal zoosporic phylum within the kingdom . Twenty genera are currently described, all of which were isolated from the digestive tracts of mammalian herbivores. Here, we report on the isolation and characterization of novel AGF taxa from faecal samples of tortoises.

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Article Synopsis
  • The study investigates the phylogenetic relationships of anaerobic gut fungi (AGF) using transcriptomic datasets from 14 genera, revealing four distinct supra-genus clades and identifying the earliest evolving genus.
  • It combines phylogenomic analysis with quantitative amino acid identity (AAI) data to propose a new taxonomic framework, placing 14 out of 20 AGF genera into four families while some genera remain unresolved.
  • The findings highlight the importance of RPB1 as a useful molecular marker for classifying AGF and provide a scientifically-grounded approach for their taxonomy.
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Members of the anaerobic gut fungi () reside in the rumen and alimentary tract of larger mammalian and some reptilian, marsupial and avian herbivores. The recent decade has witnessed a significant expansion in the number of described genera and species. However, the difficulties associated with the isolation and maintenance of strains has greatly complicated comparative studies to resolve inter- and intra-genus relationships.

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Nicrophorus is a genus of beetles that bury and transform small vertebrate carcasses into a brood ball coated with their oral and anal secretions to prevent decay and that will serve as a food source for their young. Nicrophorus pustulatus is an unusual species with the ability to overtake brood of other burying beetles and whose secretions, unlike other Nicrophorus species, has been reported not to exhibit antimicrobial properties. This work aims to better understand how the presence or absence of a food source influences the expression of genes involved in the feeding process of N.

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Bees play a key role in the functioning of human-modified and natural ecosystems by pollinating agricultural crops and wild plant communities. Global pollinator conservation efforts need large-scale and long-term monitoring to detect changes in species' demographic patterns and shifts in bee community structure. The objective of this project was to test a molecular sequencing pipeline that would utilize a commonly used locus, produce accurate and precise identifications consistent with morphological identifications, and generate data that are both qualitative and quantitative.

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