J Phys Chem Lett
September 2024
We report an acid-mediated regulation of single-molecule junction conductance achieved using an electron-deficient unit, diazapentalene, functionalized with thiophene extending units and thiomethyl aurophilic terminal groups. This diazapentalene derivative exhibits a protonation reaction in the presence of trifluoroacetic acid, as characterized by UV-vis absorption spectroscopy, and the protonated species shows a voltage-dependent single-molecule conductance, which is not observed for the pristine molecules. Specifically, under a high bias voltage of 850 mV, we observe a conductance value for the protonated molecule larger than that for the deprotonated one by a factor of 4.
View Article and Find Full Text PDFOrganic radicals are widely used as linkers or ligands to synthesize molecular magnetic materials. However, studies regarding the molecular anisotropies of radical-based magnetic materials and their multifunctionalities are rare. Herein, a photoisomerizable diarylethene ligand was used to form {[Co(3,5-DTSQ)(3,5-DTCat)](6F-DAE-py)}·3CHCN·HO (·3CHCN·HO, 6F-DAE-py = 1,2-bis(2-methyl-5-(4-pyridyl)-3-thienyl)perfluorocyclopentene), a valence-tautomeric (VT) coordination polymer.
View Article and Find Full Text PDFElectron transfer reactions can be strongly influenced by solvent dynamics. We study the photoionization of halides in water as a model system for such reactions. There are no internal nuclear degrees of freedom in the solute, allowing the dynamics of the solvent to be uniquely identified.
View Article and Find Full Text PDFJ Chem Theory Comput
February 2023
Experimental studies of charge transport through single molecules often rely on break junction setups, where molecular junctions are repeatedly formed and broken while measuring the conductance, leading to a statistical distribution of conductance values. Modeling this experimental situation and the resulting conductance histograms is challenging for theoretical methods, as computations need to capture structural changes in experiments, including the statistics of junction formation and rupture. This type of extensive structural sampling implies that even when evaluating conductance from computationally efficient electronic structure methods, which typically are of reduced accuracy, the evaluation of conductance histograms is too expensive to be a routine task.
View Article and Find Full Text PDFElectrons moving through chiral molecules are selected according to their spin orientation and the helicity of the molecule, an effect known as chiral-induced spin selectivity (CISS). The underlying physical mechanism is not yet completely understood. To help elucidate this mechanism, a non-equilibrium Green's function method, combined with a Landauer approach and density functional theory, is applied to carbon helices contacted by gold electrodes, resulting in spin polarization of transmitted electrons.
View Article and Find Full Text PDFTo improve the catalytic activity of 3d transition metal catalysts, redox-active ligands are a promising tool. These ligands influence the oxidation state of the metal center as well as the ground spin-state and make the experimental determination of both properties challenging. Therefore, first-principles calculations, in particular employing density functional theory with a proper choice of exchange-correlation (xc) functional, are crucial.
View Article and Find Full Text PDFWe report transport measurements on tunable single-molecule junctions of the organic perchlorotrityl radical molecule, contacted with gold electrodes at low temperature. The current-voltage characteristics of a subset of junctions shows zero-bias anomalies due to the Kondo effect and in addition elevated magnetoresistance (MR). Junctions without Kondo resonance reveal a much stronger MR.
View Article and Find Full Text PDFIn optically excited states in molecules and materials, coupling between local electron spins plays an important role for their photoemission properties and is interesting for potential applications in quantum information processing. Recently, it was experimentally demonstrated that the photogenerated local spins in donor-acceptor metal complexes can interact with the spin of an attached radical, resulting in a spin-coupling-dependent mixing of excited doublet states, which controls the local spin density distributions on donor, acceptor, and radical subunits in optically excited states. In this work, we propose an energy-difference scheme to evaluate spin coupling in optically excited states, using unrestricted and spin-flip simplified time-dependent density functional theory.
View Article and Find Full Text PDFThere is increasing interest in the study of chiral degrees of freedom occurring in matter and in electromagnetic fields. Opportunities in quantum sciences will likely exploit two main areas that are the focus of this Review: (1) recent observations of the chiral-induced spin selectivity (CISS) effect in chiral molecules and engineered nanomaterials and (2) rapidly evolving nanophotonic strategies designed to amplify chiral light-matter interactions. On the one hand, the CISS effect underpins the observation that charge transport through nanoscopic chiral structures favors a particular electronic spin orientation, resulting in large room-temperature spin polarizations.
View Article and Find Full Text PDFSingle-molecule magnets (SMMs) show superparamagnetic behaviour below blocking temperature at the molecular scale, so they exhibit large magnetic density compared to the conventional magnets. Combining SMMs and molecular conductors in one compound will bring about new physical phenomena, however, the synergetic effects between them still remain unexplored. Here we present a layered molecule-based compound, β''-(BEDO-TTF) [Co(pdms)]·3HO (), (BEDO-TTF (BO) and Hpdms are bis(ethylenedioxy)tetrathiafulvalene and 1,2-bis(methanesulfonamido)benzene, respectively), which was synthesized by using an electrochemical approach and studied by using crystal X-ray diffraction.
View Article and Find Full Text PDFHybridization functions are an established tool for investigating the coupling between a correlated subsystem (often a single transition metal atom) and its uncorrelated environment (the substrate and any ligands present). The hybridization function can provide valuable insight into why and how strong correlation features such as the Kondo effect can be chemically controlled in certain molecular adsorbates. To deepen this insight, we introduce a local decomposition of the hybridization function, based on a truncated cluster approach, enabling us to study individual effects on this function coming from specific parts of the systems (e.
View Article and Find Full Text PDFThe metal-metal-bonded molecule [BuN][(L)Fe(dmf)] (Fe) was previously shown to possess a thermally isolated spin = / ground state and found to exhibit slow magnetization relaxation below a blocking temperature of ∼5 K [ , , 13949-13956]. Here, we present a comprehensive spectroscopic investigation of this unique single-molecule magnet (SMM), combining ultrawideband field-swept high-field electron paramagnetic resonance (EPR) with frequency-domain Fourier-transform terahertz EPR to accurately quantify the spin Hamiltonian parameters of Fe. Of particular importance is the near absence of a 4th-order axial zero-field splitting term, which is known to arise because of quantum mechanical mixing of spin states on account of the relatively weak spin-spin (superexchange) interactions in traditional polynuclear SMMs such as the celebrated Mn-acetate.
View Article and Find Full Text PDFSingle-molecule magnets exhibit magnetic bistabililties at the molecular level, making them promising for molecule-based spintronics due to high magnetic densities. The incorporation of SMM behavior and electrical conductivity in one compound is rare because these two physical properties often do not operate in the same temperature range, which further hinders their use in practical applications. Here we present an organic-inorganic molecular hybrid, β″-(BEDO-TTF)[Co(pdms)]·(MeCN)(HO) () (BEDO-TTF = bis(ethylenedioxy)tetrathiafulvalene and Hpdms = 1,2-bis(methanesulfonamido)benzene), which manifests both metallic conduction (electrical conductivity up to 1000 S cm at 12 K under 2.
View Article and Find Full Text PDFWe have carried out a comprehensive study of the influence of electronic structure modeling and junction structure description on the first-principles calculation of the spin polarization in molecular junctions caused by the chiral induced spin selectivity (CISS) effect. We explore the limits and the sensitivity to modeling decisions of a Landauer/Green's function/two-component density functional theory approach to CISS. We find that although the CISS effect is entirely attributed in the literature to molecular spin filtering, spin-orbit coupling being partially inherited from the metal electrodes plays an important role in our calculations on ideal carbon helices, even though this effect cannot explain the experimental conductance results.
View Article and Find Full Text PDFHeisenberg exchange spin coupling between metal centers is essential for describing and understanding the electronic structure of many molecular catalysts, metalloenzymes, and molecular magnets for potential application in information technology. We explore the machine-learnability of exchange spin coupling beyond linear regression, which has not been studied yet. We employ Gaussian process regression, since it can potentially deal with small training sets (as likely associated with the rather complex molecular structures required for exploring spin coupling) and since it provides uncertainty estimates ("error bars") along with predicted values.
View Article and Find Full Text PDFJ Chem Theory Comput
October 2020
Understanding charge transport through molecular wires is important for nanoscale electronics and biochemistry. Our goal is to establish a simple first-principles protocol for predicting the charge transport mechanism in such wires, in particular the crossover from coherent tunneling for short wires to incoherent hopping for longer wires. This protocol is based on a combination of density functional theory with a polarizable continuum model introduced by Kaupp et al.
View Article and Find Full Text PDFThe chiral-induced spin selectivity (CISS) effect, which describes the spin-filtering ability of diamagnetic structures like DNA or peptides having chiral symmetry, has emerged in the past years as the central mechanism behind a number of important phenomena, like long-range biological electron transfer, enantiospecific electrocatalysis, and molecular recognition. Also, CISS-induced spin polarization has a considerable promise for new spintronic devices and the design of quantum materials. The CISS effect is attributed to spin-orbit coupling, but a sound theoretical understanding of the surprising magnitude of this effect in molecules without heavy atoms is currently lacking.
View Article and Find Full Text PDFAngew Chem Int Ed Engl
February 2020
Pinching molecules via chemical strain suggests intuitive consequences, such as compression at the pinched site and clothespin-like opening of other parts of the structure. If this opening affects two spin centers, it should result in reduced communication between them. We show that for naphthalene-bridged biscobaltocenes with competing through-space and through-bond pathways, the consequences of pinching are far less intuitive: despite the known dominance of through-space interactions, the bridge plays a much larger role for exchange spin coupling than previously assumed.
View Article and Find Full Text PDFJ Phys Chem A
November 2019
Electronic communication through molecular bridges is important for different types of experiments, such as single-molecule conductance, electron transfer, superexchange spin coupling, and intramolecular singlet fission. In many instances, the chemical structure of the bridge determines how the two parts it is connecting communicate, and does so in ways that are transferable between these different manifestations (for example, high conductance often correlates with strong antiferromagnetic spin coupling, and low conductance due to destructive quantum interference correlates with ferromagnetic coupling). Defining electronic communication as a transferable property of the bridge can help transfer knowledge between these different areas of research.
View Article and Find Full Text PDFA reliable first-principles description of singlet diradical character is essential for predicting nonlinear optical and magnetic properties of molecules. As diradical and closed-shell electronic structures differ in their distribution of single, double, triple, and aromatic bonds, modeling electronic diradical character requires accurate bond-length patterns, in addition to accurate absolute bond lengths. We therefore introduce structural diradical character, which we suggest as an additional measure for comparing first-principles calculations with experimental data.
View Article and Find Full Text PDFEfficient electronic communication over long distances is a desirable property of molecular wires. Charge delocalization in mixed-valence (MV) compounds where two redox centers are linked by a molecular bridge is a particularly well-controlled instance of such electronic communication, thus lending itself to comparisons between theory and experiment. We study how to achieve and control long-range charge delocalization in cationic organic MV systems by means of Kohn-Sham density functional theory (DFT) and show that a captodative substitution approach recently suggested for molecular conductance ( Stuyver et al.
View Article and Find Full Text PDFThe prediction of magnetic behavior is important for the design of new magnetic materials. Kohn-Sham density functional theory is popular for this purpose, although one should be careful about choosing the right exchange-correlation functional. Here, we perform a statistical analysis to test different range-separated hybrid density functionals for the calculation of magnetic exchange coupling constants J of fourteen organic diradicals.
View Article and Find Full Text PDFIn order to design magnetically active molecular materials, it is desirable to arrange paramagnetic molecules in one dimension, which may lead to a molecular bar magnet. For this purpose, vanadocenyl units with three unpaired electrons each can be stacked in a head-to-head fashion. The target compound in this work is 1,8-bisvanadocenyl naphthalene, where the naphthalene backbone serves as a clamp keeping two vanadocene units together.
View Article and Find Full Text PDFJ Comput Chem
January 2018
Understanding (super-)exchange coupling between local spins is an important task in theoretical chemistry and solid-state physics. We show that a Green's-function approach introduced earlier (Liechtenstein et al., J.
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