Publications by authors named "Canica M"

The application of animal manure to agricultural soil is a very common practice to improve soils fertility, providing a rich source of organic matter and nutrients. However, the presence of certain trace elements in the manure can result in a threat for food safety and the environment. In addition to their potential toxic effects on crops, animal and humans, certain metals such as cadmium, chromium, copper, nickel, mercury, cobalt, lead and zinc may play a role in the emergence and spread of antibiotic resistance, as they can increase the selective pressure on bacteria.

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Aims: Antimicrobial resistance in Pseudomonas aeruginosa represents a major global challenge in public and veterinary health, particularly from a One Health perspective. This study aimed to investigate antimicrobial resistance, the presence of virulence genes, and the genetic diversity of P. aeruginosa isolates from diverse sources.

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One of the significant challenges facing modern medicine is the rising rate of antibiotic resistance, which impacts public health, animal health, and environmental preservation. Evaluating antibiotic resistance in wildlife and their environments is crucial, as it offers essential insights into the dynamics of resistance patterns and promotes strategies for monitoring, prevention, and intervention. and genera isolates were recovered from fecal samples of wild animals and environmental samples using media without antibiotic supplementation.

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  • * A total of 18 carbapenemase variants were identified, predominantly in ST131 clades A and C, with the most common variants being detected in 14 and 12 countries, respectively.
  • * The rise in isolates carrying these genes since 2021 highlights a significant public health threat posed by the high-risk ST131 lineage.
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The application of a One Health approach recognizes that human health, animal health, plant health and ecosystem health are intrinsically connected. Tackling complex challenges associated with foodborne zoonoses, antimicrobial resistance, and emerging threats is imperative. Therefore, the One Health European Joint Programme was established within the European Union research programme Horizon 2020.

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  • - Sternal bursitis is an inflammation in poultry that affects animal welfare and public health, prompting a study on its prevalence and characteristics in chickens.
  • - Researchers collected 98 samples from infected chickens, identifying 24 isolates, which showed significant antimicrobial resistance, particularly to aminoglycosides, and were mainly from clonal complex 5 strains.
  • - The study's findings, including moderate biofilm production by the isolates, emphasize the need for ongoing monitoring and specific actions to address the effects of sternal bursitis in poultry farming.
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This cross-sectional study investigates the methicillin-resistant (MRSA): its prevalence, antimicrobial resistance, and molecular characteristics in healthy swine populations in central Portugal. A total of 213 samples were collected from pigs on twelve farms, and MRSA prevalence was assessed using selective agar plates and confirmed via molecular methods. Antimicrobial susceptibility testing and whole genome sequencing (WGS) were performed to characterize resistance profiles and genetic determinants.

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  • The study focuses on antibiotic resistance in commensal microorganisms found in healthy pigs across central Portugal, highlighting the risks posed by antibiotic use in farming, particularly with critically important antibiotics reserved for human use.
  • Findings revealed high levels of antibiotic resistance in swine populations, with many strains showing multidrug resistance and specific genes linked to increased virulence and resistance to important antibiotics.
  • The results emphasize the urgent need for improved surveillance and antibiotic management practices in the pig farming industry to safeguard public health and maintain animal welfare amid rising global demand for animal products.
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L. is the largest genus of the family, and most of its species are used in the traditional medicinal systems of different countries. A systematic review was conducted, according to the PRISMA methodology, to determine the potential of plants as sources of antimicrobial agents, resulting in 2610 scientific publications from which 141 articles were selected.

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  • - The study addresses the urgent need for new antibacterial treatments to combat increasing antimicrobial resistance, especially against difficult pathogens like CRAB, CRPA, and CRE, which are resistant to carbapenem antibiotics.
  • - It explores the use of membrane-disrupting dodecyl deoxyglycosides, modifying them to enhance their effectiveness against Gram-negative bacteria by combining them with polymyxins to improve outer membrane permeability.
  • - A novel compound, alkyl 4,6-dideoxy C-glycoside 5, showed strong antimicrobial activity when paired with low doses of colistin against multiple multidrug-resistant strains, indicating its potential for further development in treating serious infections.
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  • The study investigates a 2022 outbreak of carbapenemase-producing Enterobacterales (CPE) at a Portuguese hospital, focusing on identifying sources and patient exposure risks.
  • Using a mix of epidemiological methods and whole-genome sequencing, researchers found genetically similar CPE strains in clinical and environmental samples within the same hospital area, with a specific clone linked to the outbreak.
  • Results indicated that older patients and those requiring assistance were at higher risk for CPE colonization post-admission, emphasizing how antibiotic use can lead to new resistance variants and potential CPE spread beyond hospital settings.
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Enterobacteriaceae species are part of the 2017 World Health Organization antibiotic-resistant priority pathogens list for development of novel medicines. Multidrug-resistant Klebsiella pneumoniae is an increasing threat to public health and has become a relevant human pathogen involved in life-threatening infections. Phage therapy involves the use of phages or their lytic endolysins as bioagents for the treatment of bacterial infectious diseases.

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While the prudent and reasonable use of veterinary antimicrobial agents in food-producing animals is necessary, researchers over the decades have shown that these antimicrobial agents can spread into the environment through livestock manure and wastewater. The analysis of the occurrence of antimicrobial compounds in soil samples is of a great importance to determine potential impacts on human and animal health and the environment. In this study, an affordable, rugged and simple analytical method has been developed for the determination of twenty-nine antimicrobial compounds from five different classes (tetracyclines, fluoro(quinolones), macrolides, sulfonamides and diaminopirimidines).

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Aquaculture environments can be hotspots for resistance genes through the surrounding environment. Our objective was to study the resistome, virulome and mobilome of Gram-negative bacteria isolated in seabream and bivalve molluscs, using a WGS approach. Sixty-six Gram-negative strains (Aeromonadaceae, Enterobacteriaceae, Hafniaceae, Morganellaceae, Pseudomonadaceae, Shewanellaceae, Vibrionaceae, and Yersiniaceae families) were selected for genomic characterization.

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Introduction: Antimicrobial resistance (AMR) is a One Health (OH) challenge. To achieve or maintain an effective and efficient AMR surveillance system, it is crucial to evaluate its performance in meeting the proposed objectives, while complying with resource restrictions. The OH-EpiCap tool was created to evaluate the degree of compliance of hazard surveillance activities with essential OH concepts across the following dimensions: organization, operational activities, and impact of the surveillance system.

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Root tubers of subsp. (AbR), a vulnerable endemic species, and subsp. (AmR) have traditionally been used in Portugal to treat inflammatory and infectious skin disorders.

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Whole genome sequencing data of 874 isolates carrying from 13 European Union/European Economic Area countries between 2012 and June 2022 showed the predominance of sequence types ST167, ST405, ST410, ST361 and ST648, and an increasing frequency of detection. Nearly a third (30.6%) of these isolates were associated with infections and more than half (58.

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Background: KPC-producing (KPC-Kp) is a public health problem with important clinical and epidemiological implications. We describe an outbreak of KPC-Kp at vascular surgery and neurosurgery wards in a central hospital in Porto, Portugal.

Methods: A case of KPC-Kp was considered to be a patient positive for KPC-Kp with strong epidemiological plausibility of having acquired this microorganism in the affected wards and/or with genetic relationship ≥92% between KPC-Kp isolates.

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  • The study investigated ten strains of ST398 from three different sources in Portugal: humans, aquaculture gilthead seabream, and a zoo dolphin, focusing on their antibiotic resistance and genetic characteristics.
  • All strains showed decreased susceptibility to certain antibiotics, particularly benzylpenicillin and erythromycin, with notable mutations found in fosfomycin susceptible strains indicating possible genetic variations.
  • The genetic analysis revealed that aquaculture strains were closely related, while those from humans and dolphins were more distinct, but all contained genes linked to antibiotic resistance, virulence factors, and heavy metal tolerance.
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The leaves of subsp. , an endemic Portuguese species, and subsp. have been used as food, and traditionally as medicine, for treating ulcers, urinary tract, and inflammatory disorders.

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Background: Human, animal, and environmental health are increasingly threatened by the emergence and spread of antibiotic resistance. Inappropriate use of antibiotic treatments commonly contributes to this threat, but it is also becoming apparent that multiple, interconnected environmental factors can play a significant role. Thus, a One Health approach is required for a comprehensive understanding of the environmental dimensions of antibiotic resistance and inform science-based decisions and actions.

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Cefotaximase-Munich (CTX-M) extended-spectrum beta-lactamase (ESBL) enzymes produced by confer resistance to clinically relevant third-generation cephalosporins. CTX-M group 1 variants, CTX-M-1 and CTX-M-15, are the leading ESBL-producing associated with animal and human infection, respectively, and are an increasing antimicrobial resistance (AMR) global health concern. The and genes encoding these variants have an approximate nucleotide sequence similarity of 98.

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Root tubers of subsp. (AbR), an endemic species with relevant interest due to conservation concerns, and subsp. (AmR) have been traditionally used for culinary and medicinal purposes, mainly associated with skin infection and inflammation.

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Antimicrobial resistance (AMR) is a public health issue attributed to the misuse of antibiotics in human and veterinary medicine. Since AMR surveillance requires a One Health approach, we sampled nine interconnected compartments at a hydrological open-air lab (HOAL) in Austria to obtain six bacterial species included in the WHO priority list of antibiotic-resistant bacteria (ARB). Whole genome sequencing-based typing included core genome multilocus sequence typing (cgMLST).

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  • The study focused on analyzing the resistome, virulome, and mobilome of an MCR-producing strain of bacteria from seabream fish, which were harvested from a fish farming setup.
  • It found that the identified strain, INSAq77, showed resistance to several antibiotics, particularly chloramphenicol, florfenicol, and fosfomycin, while remaining susceptible to others.
  • The research indicates a concerning spread of antibiotic resistance genes through aquaculture, which could impact human health, especially given the critical role of colistin as a last-resort antibiotic in treating severe infections.
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