Publications by authors named "Caiyan Wei"

Human P-glycoprotein (hP-gp) is an ATP-binding cassette (ABC) exporter that actively extrudes a wide range of xenobiotics from the cell, thus limiting drug delivery and contributing to multidrug resistance (MDR) in cancers. Recent structural studies have provided insights into how hP-gp binds diverse compounds, but how they are translocated through the membrane remains poorly understood at the atomic level. In this work, we used steered molecular dynamics (SMD) simulations to investigate the molecular mechanism of how hP-gp expels structurally different compounds and which molecular features favor this efflux step.

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Neuronal growth, extension, branching, and formation of neural networks are markedly influenced by the extracellular matrix-a complex network composed of proteins and carbohydrates secreted by cells. In addition to providing physical support for cells, the extracellular matrix also conveys critical mechanical stiffness cues. During the development of the nervous system, extracellular matrix stiffness plays a central role in guiding neuronal growth, particularly in the context of axonal extension, which is crucial for the formation of neural networks.

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The human multidrug transporter P-glycoprotein (P-gp) is physiologically essential and of key relevance to biomedicine. Recent structural studies have shed light on the mode of inhibition of the third-generation inhibitors for human P-gp, but the molecular mechanism by which these inhibitors enter the transmembrane sites remains poorly understood. In this study, we utilized all-atom molecular dynamics (MD) simulations to characterize human P-gp dynamics under a potent inhibitor, tariquidar, bound condition, as well as the atomic-level binding pathways in an explicit membrane/water environment.

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Article Synopsis
  • BYDV-GAV is a damaging virus spread by aphids that significantly impacts crop yields, especially in wheat, barley, and oats.
  • The study reveals that infection by BYDV-GAV triggers the activation of autophagy-related genes in wheat, leading to the formation of autophagosomes.
  • Researchers found that the viral movement protein interacts directly with a key autophagy-related gene (TaATG6), suggesting that wheat can mount a defense against BYDV-GAV by using the autophagy pathway.
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Diphyllin and its natural derivatives were identified as potent vacuolar H -ATPase (V-ATPase) inhibitors. In this study, twelve 2, 4, 5-trideoxyhexopyranosides derivatives of diphyllin were synthesized. Most of these compounds showed potent abilities to inhibit the growth of HT-29, MCF-7, HepG2 cancer cells with IC values at submicromolar concentration.

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  • Wheat yellow dwarf virus, caused by barley yellow dwarf virus (BYDV), severely impacts wheat health and food production in China through yellowing and dwarfing symptoms.
  • Small RNA sequencing revealed over 11,000 vsiRNAs in infected wheat, which can target and silence numerous wheat transcripts, especially those related to chlorophyll synthesis.
  • The study confirms that specific vsiRNAs can cleave chlorophyll synthase transcripts, leading to symptoms similar to those seen in BYDV-GAV-infected plants, highlighting the role of vsiRNAs in plant-virus interactions.
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