Homozygosity, which can arise from several genetic mechanisms including inbreeding, is frequently observed in the offspring of related parents. This inbreeding can lead to a reduced performance, due to a phenomenon known as inbreeding depression. This study assessed inbreeding depression using whole genome and regional approaches in first-lactation Australian Holsteins and Jerseys, involving approximately 33,000 Holstein and 7,000 Jersey cows born between 2000 and 2017.
View Article and Find Full Text PDFBackground: In recent years, interest has grown in quantifying resilience in livestock by examining deviations in target phenotypes. This method is based on the idea that variability in these phenotypes reflects an animal's ability to adapt to external factors. By utilizing routinely collected time-series feed intake data in pigs, researchers can obtain a broad measure of resilience.
View Article and Find Full Text PDFAlthough genomic selection has led to considerable improvements in genetic gain, it has also seemingly led to increased rates of inbreeding and homozygosity, which can negatively affect genetic diversity and the long-term sustainability of dairy populations. Using genotypes from US Holstein animals from 3 distinct stud populations, we performed a simulation study consisting of 10 rounds of selection, with each breeding population composed of 200 males and 2,000 females. The investigated selection strategies consisted of selection using true breeding values, EBV, EBV penalized for the average future genomic inbreeding of progeny (PEN-EBV), or random selection (RAND).
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