Light scattering calculations exploring sensitivity of depolarization ratio to shape changes. II. Single rod-shaped vegetative bacteria in air.

In article I of this series, calculations and graphs of the depolarization ratio, D(Theta,lambda)=1-/, for light scattered from an ensemble of single-aerosolized Bacillus spores using the discrete dipole approximation (DDA) (sometimes also called the coupled dipole approximation) were presented. The Sij in these papers denote the appropriate Mueller matrix elements. We compare graphs for different size parameters for both D(Theta,lambda) and the ratio R34(Theta,lambda)=/.

Light scattering calculations exploring sensitivity of depolarization ratio to shape changes. I. Single spores in air.

Calculations of the depolarization ratio, D(Theta, lambda) = 1 - (S22)/(S11), for light scattered from an ensemble or cloud of single aerosolized spores in air were studied using the discrete dipole approximation (DDA), sometimes also called the coupled-dipole approximation. Here S(ij) is the appropriate Mueller matrix element for scattering angle Theta and wavelength lambda. The effect of modest shape changes on D(Theta, lambda) was determined.

Sampling and quantitative analysis of clean B. subtilis spores at sub-monolayer coverage by reflectance fourier transform infrared microscopy using gold-coated filter substrates.

A study was conducted to determine the concentration dependency of the mid-infrared (MIR) absorbance of bacterial spores. A range of concentrations of Bacillus subtilis endospores filtered across gold-coated filter membranes were analyzed by Fourier transform infrared (FT-IR) reflectance microscopy. Calibration curves were derived from the peak absorbances associated with Amide A, Amide I, and Amide II vibrational frequencies by automatic baseline fitting to remove most of the scattering contribution.

Improved dispersion of bacterial endospores for quantitative infrared sampling on gold coated porous alumina membranes.

An improved method for qualitative and quantitative sampling of bacterial endospores using Fourier transform infrared (FT-IR) microscopy on gold-coated porous alumina membranes is presented. Bacillus subtilis endospores were filtered onto gold-coated alumina membranes serving as substrates. Studies in the mid-infrared (MIR) region revealed the characteristic bacterial absorption spectrum at low surface concentration, while scanning electron microscopy (SEM) images of the same samples provided precise calculation of the surface concentration of the bacterial endospores.

In situ measurement of the infrared absorption and extinction of chemical and biologically derived aerosols using flow-through photoacoustics.

In an effort to establish a more reliable set of optical cross sections for a variety of chemical and biological aerosol simulants, we have developed a flow-through photoacoustic system that is capable of measuring absolute, mass-normalized extinction and absorption cross sections. By employing a flow-through design we avoid issues associated with closed aerosol photoacoustic systems and improve sensitivity. Although the results shown here were obtained for the tunable CO2 laser waveband region, i.

Two-dimensional multiwavelength fluorescence spectra of dipicolinic acid and calcium dipicolinate.

Dipicolinic acid (DPA) and the Ca2+ complex of DPA (CaDPA) are major chemical components of bacterial spores. With fluorescence being considered for the detection and identification of spores, it is important to understand the optical properties of the major components of the spores. We report in some detail on the room-temperature fluorescence excitation and emission spectra of DPA and its calcium ion complex and provide a comparison of the excitation-emission spectrum in a dry, wet paste and aqueous form.

Rapid optically based measurements of diameter and length for spherical or rod-shaped bacteria in vivo.

The application in light scattering of the Mueller matrix ratio (S34)/(S11) for determining average particle size is extended to a large size parameter range for spherical or randomly oriented rod-shaped particles such as micro-organisms. It is shown that combining the graph of this ratio with a Coulter counter measurement of particle volume gives results in agreement with microscopic measurements. Thus this combination provides a method to measure particle diameter and width simultaneously in real time for elongated particles such as bacteria, which are measured in vivo with this method.

Two-dimensional angular optical scattering patterns of microdroplets in the mid infrared with strong and weak absorption.

Two-dimensional angular optical scattering (TAOS) patterns of droplets composed of a mixture of H2O and D2O are detected in the mid infrared. First, a lens is used in the Abbé sine condition to collect a small solid angle of light, where the scattering pattern matches well numerical simulations based on Mie theory. Next, TAOS patterns from droplets spanning a large (approximately 27pi sr) solid angle are captured simultaneously at two wavelengths.