Publications by authors named "Brian S Safina"

Discovery efforts leading to the identification of cyclopentane carboxylic acid 31, a potent inhibitor of Na1.7 that showed high selectivity over Na1.5 and exhibited robust analgesic effects in an inherited erythromelalgia (IEM) transgenic mouse assay, are described herein.

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Transient receptor potential ankyrin 1 (TRPA1) is a nonselective calcium ion channel highly expressed in the primary sensory neurons, functioning as a polymodal sensor for exogenous and endogenous stimuli, and has been implicated in neuropathic pain and respiratory disease. Herein, we describe the optimization of potent, selective, and orally bioavailable TRPA1 small molecule antagonists with strong target engagement in rodent models. Several lead molecules in preclinical single- and short-term repeat-dose toxicity studies exhibited profound prolongation of coagulation parameters.

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Innate pattern recognition receptor agonists, including Toll-like receptors (TLRs), alter the tumor microenvironment and prime adaptive antitumor immunity. However, TLR agonists present toxicities associated with widespread immune activation after systemic administration. To design a TLR-based therapeutic suitable for systemic delivery and capable of safely eliciting tumor-targeted responses, we developed immune-stimulating antibody conjugates (ISACs) comprising a TLR7/8 dual agonist conjugated to tumor-targeting antibodies.

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Article Synopsis
  • TRPA1 is a nonselective ion channel found in sensory neurons that plays a role in sensing various stimuli and is linked to conditions like neuropathic pain and respiratory diseases.* -
  • Researchers optimized a series of small molecule antagonists to inhibit TRPA1, discovering a new linker that enhances their effectiveness and bioavailability.* -
  • The effectiveness of one compound was tested in animal models, showing a significant reduction in inflammation, and its binding structure was elucidated using cryogenic electron microscopy.*
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Na1.7 is an extensively investigated target for pain with a strong genetic link in humans, yet in spite of this effort, it remains challenging to identify efficacious, selective, and safe inhibitors. Here, we disclose the discovery and preclinical profile of GDC-0276 () and GDC-0310 (), selective Na1.

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Despite the development of effective therapies, a substantial proportion of asthmatics continue to have uncontrolled symptoms, airflow limitation, and exacerbations. Transient receptor potential cation channel member A1 (TRPA1) agonists are elevated in human asthmatic airways, and in rodents, TRPA1 is involved in the induction of airway inflammation and hyperreactivity. Here, the discovery and early clinical development of GDC-0334, a highly potent, selective, and orally bioavailable TRPA1 antagonist, is described.

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Article Synopsis
  • Researchers utilized structure- and ligand-based design methods to create new Na1.7 inhibitors based on piperidyl chromane arylsulfonamide.
  • They improved the drug's effectiveness by refining its chemical structure and reducing its breakdown in the body, leading to the identification of a compound called GNE-616 (24).
  • GNE-616 demonstrated strong performance in experiments with mice and showed selectivity for specific Na1.7 isoforms, which was further studied through site-directed mutagenesis.
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Herein, we report the discovery and optimization of a series of orally bioavailable acyl sulfonamide Na1.7 inhibitors that are selective for Na1.7 over Na1.

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The sodium channel Na1.7 has emerged as a promising target for the treatment of pain based on strong genetic validation of its role in nociception. In recent years, a number of aryl and acyl sulfonamides have been reported as potent inhibitors of Na1.

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Transient receptor potential ankyrin 1 (TRPA1) is a non-selective cation channel expressed in sensory neurons where it functions as an irritant sensor for a plethora of electrophilic compounds and is implicated in pain, itch, and respiratory disease. To study its function in various disease contexts, we sought to identify novel, potent, and selective small-molecule TRPA1 antagonists. Herein we describe the evolution of an N-isopropylglycine sulfonamide lead (1) to a novel and potent (4 R,5 S)-4-fluoro-5-methylproline sulfonamide series of inhibitors.

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Article Synopsis
  • Three new pyrrolobenzodiazepine (PBD) drug-linkers have been created for use in antibody-drug conjugates (ADCs), each featuring a maleimide for connecting to antibodies and varying link types (alkyne, triazole, piperazine).
  • These linkers showed strong in vitro potency against certain cancer cell lines, with IC values ranging from 11 to 48 ng/mL in HER2-positive models, while also being ineffective in HER2-negative models.
  • In vivo studies demonstrated substantial anti-tumor effects in HER2-positive tumor models at different dosages, highlighting the effectiveness of noncleavable PBD-ADCs, especially in
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A novel selective benzoxazepin inhibitor of PI3Kδ has been discovered. Beginning from compound , an αPI3K inhibitor, we utilized structure-based drug design and computational analysis of dihedral torsion angles to optimize for PI3Kδ isoform potency and isoform selectivity. Further medicinal chemistry optimization of the series led to the identification of , a highly potent and selective inhibitor of PI3Kδ.

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Article Synopsis
  • - Researchers developed a new series of aryl sulfonamides that are very effective (nanomolar potency) and specifically target the human sodium channel hNaV1.7, which is important for pain signaling.
  • - They focused on enhancing the efficacy of these inhibitors while reducing potential safety issues, culminating in the creation of a promising compound (compound 3).
  • - This new compound showed strong pain-relieving effects in animal studies and works by binding to a specific part of the hNaV1.7 channel, highlighting its potential as a therapeutic target for pain management.
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Voltage-gated sodium (Nav) channels propagate action potentials in excitable cells. Accordingly, Nav channels are therapeutic targets for many cardiovascular and neurological disorders. Selective inhibitors have been challenging to design because the nine mammalian Nav channel isoforms share high sequence identity and remain recalcitrant to high-resolution structural studies.

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Article Synopsis
  • Inhibitor 2 caused micronuclei formation in laboratory cell assays, indicating potential genotoxic effects.
  • By altering the 2-benzimidazole structure and heteroatom linkers, researchers created compounds that improved selectivity for PI3Kδ and showed better pharmacokinetics in live models.
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The discovery and optimization of a series of 6,7-dihydro-5H-cyclopenta[d]pyrimidine compounds that are ATP-competitive, selective inhibitors of protein kinase B/Akt is reported. The initial design and optimization was guided by the use of X-ray structures of inhibitors in complex with Akt1 and the closely related protein kinase A. The resulting compounds demonstrate potent inhibition of all three Akt isoforms in biochemical assays and poor inhibition of other members of the cAMP-dependent protein kinase/protein kinase G/protein kinase C extended family and block the phosphorylation of multiple downstream targets of Akt in human cancer cell lines.

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Article Synopsis
  • - A new inhibitor of the PI3Kδ enzyme is introduced, showing over 200 times more selectivity for other PI3K isoforms and additional kinases.
  • - The selectivity is explained using structure-activity relationships and detailed crystal structures of the inhibitor bound to a specific mutant form of PI3Kγ.
  • - Pharmacokinetic studies in rats and mice indicate that this inhibitor could be a valuable tool for in vivo research.
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  • PI3Kδ is a lipid kinase found mostly in leukocytes and plays a crucial role in B cell signaling, making it a target for treating diseases like rheumatoid arthritis.
  • Researchers discovered new, effective PI3Kδ inhibitors and developed a structural understanding that supports their ability to selectively inhibit different PI3K isoforms (α, β, γ).
  • The study highlighted a key element in their design that relates to CYP3A4 time-dependent inhibition, and various strategies were suggested to monitor and reduce this inhibitor issue, utilizing structure-based design for further improvements.
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The completion of the total synthesis of thiostrepton (1) is described. The synthesis proceeded from key building blocks 2-5, which were assembled into a growing substrate that finally led to the target molecule. Thus, the dehydropiperidine peptide core 2 was, after appropriate manipulation, coupled to the thiazoline-thiazole fragment 3, and the resulting product was advanced to intermediate 11 possessing the thiazoline-thiazole macrocycle.

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The first phase of the total synthesis of thiostrepton (1), a highly complex thiopeptide antibiotic, is described. After a brief introduction to the target molecule and its structural motifs, it is shown that retrosynthetic analysis of thiostrepton reveals compounds 23, 24, 26, 28, and 29 as potential key building blocks for the projected total synthesis. Concise and stereoselective constructions of all these intermediates are then described.

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