Publications by authors named "Bo Ding"

FUS-mediated alternative splicing and METTL3-regulated RNA methylation play crucial roles in RNA processing. The purpose of this study was to investigate the interactive roles of FUS and METTL3 in gastric cancer (GC) progression. RNA sequencing data were obtained from the TCGA-STAD dataset.

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Introduction: The identification of peptides eluted from HLA complexes by mass spectrometry (MS) can provide critical data for deep learning models of antigen presentation prediction and promote neoantigen vaccine design. A major challenge remains in determining which HLA allele eluted peptides correspond to.

Methods: To address this, we present a tool for prediction of multiple allele (MA) presentation called LRMAHpan, which integrates LSTM network and ResNet_CA network for antigen processing and presentation prediction.

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Metastatic hepatocellular carcinoma (HCC) seriously threatens patients' prognosis. It was previously suggested that the insulin growth factor binding protein (IGFBP) family could serve as cancer suppressors in the development and metastasis of HCC. However, the role of IGFBP4 and its underlying molecular mechanism in HCC metastasis is elusive.

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  • * This study analyzed tissue samples to identify gene modules associated with the progression from normal cervix to cervical intraepithelial neoplasia and ultimately CC, using advanced techniques like transcriptome sequencing and machine learning models.
  • * Findings revealed CARMN as a significant gene in CC, showing that reduced CARMN expression affects key cellular pathways, leading to an increased risk of CC, with specific genetic variants also linked to this risk.
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Background: Previous studies mainly concentrate on neoadjuvant chemotherapy (NACT) for delivery delay in FIGO Stage IB1-IIIB cervical cancer during pregnancy to prevent early preterm delivery while not affecting maternal outcome.

Case: Here, we described two pregnant patients with FIGO Stage IIIC cervical cancer about their diagnosis, treatment, and outcome. Both patients underwent cesarean delivery, left enlarged lymph node dissection, and longitudinal monitoring by circulating tumor DNA.

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Limited evidence was available on ambient air pollution and pediatric atopic dermatitis (AD). The study aimed to evaluate the associations between short-term exposure to air pollutants and outpatient visits for pediatric AD. From 2016-2018, we collected data on six criteria air pollutants (PM, PM, NO, SO, CO and O) and daily outpatient visits for pediatric AD in 66 hospitals, covering all districts in Shanghai, China.

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The Janus kinase/signal transducer and activator of transcription (JAK/STAT) signaling pathway within the innate immune system plays a crucial role in defending insects against bacterial, fungal, and viral pathogens. In this study, we identified and cloned five key genes of this signaling pathway in Myzus persicae: MpDome-1, MpDome-2, MpJak, MpStat92E-1, and MpStat92E-2. Our results illustrated that these genes were highly expressed in first, second and third-instar nymphs.

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  • This study investigates how wildfires affect soil microbial communities in karst forests, a topic that has been minimally explored compared to other forest ecosystems.
  • Key findings show that wildfires lead to significant alterations in the composition and diversity of fungi and bacteria, with fungal communities shifting from Basidiomycota to Ascomycota and an increase in Actinobacteria among bacteria.
  • Additionally, post-fire conditions resulted in changes in microbial network complexity and highlighted soil factors like organic matter, nitrogen, phosphorus, and water content as essential influencers of these communities, providing insights for future ecosystem restoration efforts.
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Cotton fiber is one of the most important natural fiber sources in the world, and lipid metabolism plays a critical role in its development. However, the specific role of lipid molecules in fiber development and the impact of fatty acid alterations on fiber quality remain largely unknown. In this study, we demonstrate that the downregulation of , a gene encoding phosphatidylcholine diacylglycerol cholinephosphotransferase (PDCT), results in an improvement of fiber fineness.

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Background: Embryonal rhabdomyosarcoma (ERMS) is a highly aggressive form of soft-tissue sarcoma that predominantly affects children. Due to limited benefits and resistance to therapy, there is an unmet need to explore alternative therapeutic strategies.

Case Presentation: In this report, we present a rare case of pediatric ERMS located on the right side of the maxillary gingiva.

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Background: This study aims to investigate strategies for reducing early relapse following mandibular distraction osteotomy (MDO) in craniofacial microsomia (CFM) patients.

Methods: Forty CFM patients were divided into 2 groups: 20 underwent MDO alone, while 20 received MDO combined with orthodontic treatment (MDO-O). Preoperative, prefixation, and postfixation CT data in DICOM format were collected and reconstructed using Proplan software.

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Background: The crucial role of insect chitinase in molting, pupation, and emergence renders it a promising target for pest control strategies. Despite the extensive investigation of chitinase genes in various pests, there is still a lack of systematic identification and functional analysis related to aphid chitinase.

Results: We systematically identified a total of nine chitinase/chitinase-like genes and one ENGase gene, which included eight Cht genes, one IDGF gene, and one ENGase gene.

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  • Acoustic cavitation is important in biomedical applications but can harm healthy tissues if uncontrolled, making real-time monitoring crucial for treatment safety and efficiency.
  • The research introduced a new passive cavitation imaging (PCI) system that combines real-time monitoring with B-mode imaging, allowing simultaneous visualization and quantitative assessment of cavitation during ultrasound treatments.
  • Utilizing an improved algorithm to enhance resolution, the system effectively evaluated cavitation under different conditions, aiming to connect lab research with real-world applications, particularly in areas like ultrasound thrombolysis.
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This case report describes correction of maxillary constriction using a maxillary skeletal expander (MSE) in a 15-year-old female with a skeletal Class III pattern and asymmetry. The maxillary expansion device with four mini-implants was used to correct the constricted maxilla, bilateral crossbite of the posterior teeth, and crowding of the dentition. Comparison of cone-beam computed tomography scans before and after treatment showed that the majority of maxillary expansion was orthopedic, with minimal alveolar bone bending and tooth tipping.

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  • Chronic pelvic pain (CPP) is a significant issue for women, negatively affecting their physical and mental health and posing challenges in diagnosis and treatment due to its complex causes.
  • The study surveyed 1108 women to identify risk factors for CPP and developed a predictive nomogram using logistic regression, which successfully distinguished between women with and without CPP.
  • Key risk factors included weight, dysmenorrhea, sexual dysfunction, urinary incontinence, and a history of pelvic inflammatory disease, with the model showing strong validation and potential clinical applicability.
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Purpose: The aim of this study was to analyze the survival of patients with endometrial cancer diagnosed after a prior cancer and identify risk factors of endometrial cancer death in this population.

Methods: Totally 1371 women diagnosed with second primary endometrial cancer (SPEC) between 2004 and 2015 were identified using the SEER database. Clinicopathological characteristics were collected, and Fine and Gray regression model was employed to assess the impact of treatment for the first primary cancer (FPC) and SPEC on the mortality of endometrial cancer patients.

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Background: Insulin antibodies (IAs) affect blood glucose control in patients receiving insulin therapy.

Aim: To investigate the relationship between different hypoglycemic treatments and IAs in patients with type 2 diabetes mellitus (T2DM).

Methods: This cross-sectional, retrospective study included 1863 patients with T2DM who were receiving exogenous insulin therapy.

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Class-Incremental learning (CIL) is challenging due to catastrophic forgetting (CF), which escalates in exemplar-free scenarios. To mitigate CF, Knowledge Distillation (KD), which leverages old models as teacher models, has been widely employed in CIL. However, based on a case study, our investigation reveals that the teacher model exhibits over-confidence in unseen new samples.

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Immune checkpoint blockade (ICB) therapy has revolutionized cancer treatment but has shown limited efficacy in gynecologic cancers. VISTA (V-domain Ig suppressor of T-cell activation), a member of the B7 family, is emerging as another checkpoint that regulates the anti-tumor immune responses within the tumor microenvironment. This paper reviews the structure, expression, and mechanism of action of VISTA.

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  • There is currently no unified agreement on which genes are critical for a homologous recombination repair (HRR) gene panel used to identify HRR deficiency (HRD) in epithelial ovarian cancer (EOC) patients.
  • The study aimed to evaluate a specific 15-gene HRR panel as a tool for predicting outcomes in newly diagnosed EOC patients in China.
  • Findings revealed that 43.2% of the 308 EOC patients had harmful HRR mutations, with BRCA1/2 mutations specifically linked to better prognosis, particularly in patients not receiving PARP inhibitors.
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, a class of strictly anaerobic Gram-positive bacteria, existed mainly in the gut of humans and many mammals. Here, we report the complete genome sequence of B01, whose genome length is 1,935,423 bp with a GC content of 60.49%.

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Ensuring the safety of insecticides to natural enemy insects of pests is crucial for integrating chemical and biological control strategies. Broflanilide, a novel meta-diamide insecticide, exhibits high insecticidal activity against Myzus persicae (Sulzer) (Hemiptera: Aphididae). To integrate chemical and biological control against M.

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The implementation of real-time, convenient and high-resolution passive cavitation imaging (PCM) is crucial for ensuring the safety and effectiveness of ultrasound applications related to cavitation effects. However, the current B-mode ultrasound imaging system cannot achieve these functions. By developing a hybrid adaptive beamforming algorithm, the current work presented a real-time PCM and B-mode fusion imaging technique, using a modified diagnostic ultrasound platform enabling time-division multiplexing external triggering function.

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