Publications by authors named "Bidhan C Bera"

Background: Equine herpesvirus type 1 (EHV1) is a ubiquitous viral pathogen infecting the equine population worldwide. EHV1 infection causes respiratory illness, abortion, neonatal foal mortality, and myeloencephalopathy. The currently available modified live EHV1 vaccines have safety and efficacy limitations.

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Unlabelled: In the current scenario of growing world population, limited cultivable land resources, plant diseases, and pandemics are some of the major factors responsible for declining global food security. Along with meeting the food demand, the maintenance of food quality is also required to ensure healthy consumption and marketing. In agricultural fields, pest infestations and bacterial diseases are common causes of crop damage, leading to massive yield losses.

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Equine influenza (EI) is a highly contagious acute respiratory disease of equines caused by the H3N8 subtype of Influenza A virus i.e. equine influenza virus (EIV).

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Equine herpesvirus 1 (EHV1) infection is a global health problem in equines and the virus is responsible for abortions, respiratory disease and myeloencephalitis in horses. Disease management requires proper biosecurity and immunoprophylactic measures. Vaccines strengthening both arms of immunity are essential for proper control and there has been a continuous focus in this area for generation of better vaccines.

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Extensive and multiple drug resistance in combined with the formation of biofilms is responsible for its high persistence in nosocomial infections. A sequential method to devise a suitable phage cocktail with a broad host range and high lytic efficiency against a biofilm forming XDR strain is presented here. Out of a total thirteen phages isolated against , five were selected on the basis of their high lytic spectra assessed using spot assay and productivity by efficiency of plating assay.

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Emergence of multiple drug resistant (MDR) strains of and a withering drug discovery pipeline necessitates the search for effective alternatives to replace or synergize with currently used antibiotics. In this report, we have described the synergy assessment of a virulent phage φAB182 with a wide range of antibiotics. Myophage φAB182 was isolated from sewage against MDR and exhibited maximum stability at 25 °C and pH 7.

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Combination therapy of bacteriophages and antibiotics requires careful selection of specific antibiotics as it is crucial towards determining the success of phage therapy to treat multiple drug-resistant bacterial infections. So, we examined how different antibiotics can affect phage lytic activity when used in combination against targeted bacteria. Various antibiotics targeting bacterial protein synthesis pathways were tested for their bactericidal action in combination with bacteriophages of Acinetobacter baumannii (φAB145, φAB182), Staphylococcus aureus (φSA115, φSA116) and Salmonella Typhimurium (φST143, φST188).

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High cytotoxicity and increasing resistance reports of existing chemotherapeutic agents against T. evansi have raised the demand for novel, potent, and high therapeutic index molecules for the treatment of surra in animals. In this regard, repurposing approach of drug discovery has provided an opportunity to explore the therapeutic potential of existing drugs against new organism.

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Phage display is one of the important and effective molecular biology techniques and has remained indispensable for research community since its discovery in the year 1985. As a large number of nucleotide fragments may be cloned into the phage genome, a phage library may harbour millions or sometimes billions of unique and distinctive displayed peptide ligands. The ligand-receptor interactions forming the basis of phage display have been well utilized in epitope mapping and antigen presentation on the surface of bacteriophages for screening novel vaccine candidates by using affinity selection-based strategy called biopanning.

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Article Synopsis
  • Porcine circovirus type 3 (PCV3) is a newly identified virus linked to serious diseases in pigs, such as reproductive failure and high mortality in piglets, with increasing reports globally, including in India.
  • The study in India revealed the presence of PCV3 in sows experiencing reproductive issues, as well as in healthy pigs, indicating its widespread circulation.
  • Indian strains of PCV3 closely resemble those from other countries, suggesting its emergence as a significant pig pathogen, which calls for detailed research on its spread and impact, as well as effective control measures.
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Equine influenza is a leading cause for respiratory illness in equines. Major control measures involve vaccination which requires continuous harmonization owing to antigenic drift. The present study focused on assessing the protective efficacy of an inactivated recombinant equine influenza virus (rgEIV) vaccine candidate adjuvanted with Montanide Pet Gel in murine model.

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Objectives: Klebsiella pneumoniae is an important emerging pathogen of humans and animals leading to serious clinical consequences. Increased antibiotic use has promoted the emergence of carbapenem-resistant and extended-spectrum β-lactamase (ESBL)-producing K. pneumoniae strains.

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  • B. bronchiseptica is a Gram-negative bacterium known for causing diseases in various animals, but this study is the first to report its presence in horses in India.
  • The research involved isolating and identifying B. bronchiseptica strains from horses suffering from respiratory infections across different states in India.
  • Antimicrobial testing revealed resistance to multiple antibiotics, and the virulence of the strains was confirmed through gene sequencing and PCR, highlighting their role in respiratory infections in horses.
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  • A novel lytic bacteriophage named VTCCBPA5 was isolated from village pond water, specifically targeting the harmful bacteria Aeromonas veronii.
  • The phage belongs to the Podoviridae family, showing unique characteristics such as stability across a pH range of 6-10 and temperatures from 4-45 °C.
  • Phylogenetic analysis indicates that VTCCBPA5 is distinctly different from other known Aeromonas phages, suggesting its potential use in controlling infections caused by Aeromonas veronii in the environment.
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  • Equine influenza viruses (EIVs) cause serious respiratory infections in horses, and despite vaccination efforts, they continue to pose a significant threat to equine populations worldwide.
  • The study evaluates BALB/c mice as a model for testing an inactivated H3N8 EIV vaccine, assessing its effectiveness through various measures like serology and histopathology after exposure to the virus.
  • Results indicated that the vaccine generated a strong immune response, providing significant protection against the H3N8 virus, which suggests BALB/c mice are useful for preliminary vaccine efficacy testing before trials in horses.
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  • Equine influenza (EIV) poses a significant health risk to horses globally, prompting an analysis of its polymerase genes to understand genetic and evolutionary factors influencing the virus.
  • Key findings identified specific amino acid changes across polymerase genes that contributed to the diversification of EIVs into various groups, particularly noting consistent changes in a clade circulating since 2007.
  • The study revealed that codon usage bias in EIV polymerase genes is weak, primarily shaped by natural selection rather than mutation pressure, with distinct clusters emerging based on evolutionary divergence.
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The ecosystem is continuously exposed to a wide variety of antimicrobials through waste effluents, agricultural run-offs and animal-related and anthropogenic activities, which contribute to the spread of antibiotic resistance genes (ARGs). The contamination of ecosystems with ARGs may create increased opportunities for their transfer to naive microbes and eventually lead to entry into the human food chain. Transduction is a significant mechanism of horizontal gene transfer in natural environments, which has traditionally been underestimated as compared to transformation.

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Swinepox virus (SWPV), a member of the genus Suipoxvirus causes generalized pock-like lesions on the body of domestic and wild pigs. Although outbreak has been reported in India since 1987, virus isolation and genetic characterization remained elusive. In September 2013, an outbreak of acute skin infection occurred in piglets in a commercial piggery unit at Rohtak district in Haryana, India.

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Equine influenza viruses (EIVs) of H3N8 subtype are culprits of severe acute respiratory infections in horses, and are still responsible for significant outbreaks worldwide. Adaptability of influenza viruses to a particular host is significantly influenced by their codon usage preference, due to an absolute dependence on the host cellular machinery for their replication. In the present study, we analyzed genome-wide codon usage patterns in 92 EIV strains, including both H3N8 and H7N7 subtypes by computing several codon usage indices and applying multivariate statistical methods.

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A bacteriophage (VTCCBPA6) against a pathogenic strain of Aeromonas hydrophila was isolated from the sewage of an organized equine breeding farm. On the basis of TEM analysis, phage belonged to family Myoviridae. PCR amplification and sequence analysis of gp23 gene (encoding for major capsid protein) revealed phylogenetic resemblance to T4 like virus genus.

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Equine influenza viruses (EIV)-H3N8 continue to circulate in equine population throughout the world. They evolve by the process of antigenic drift that leads to substantial change in the antigenicity of the virus, thereby necessitating substitution of virus strain in the vaccines. This requires frequent testing of the new vaccines in the in vivo system; however, lack of an appropriate laboratory animal challenge model for testing protective efficacy of equine influenza vaccine candidates hinders the screening of new vaccines and other therapeutic approaches.

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The present immuno-diagnostic method using soluble antigens from whole cell lysate antigen for trypanosomosis have certain inherent problems like lack of standardized and reproducible antigens, as well as ethical issues due to in vivo production, that could be alleviated by in vitro production. In the present study we have identified heat shock protein 70 (HSP70) from T. evansi proteome.

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Phage therapy has been previously tried for treatment of diarrhoea in calves, pigs and lambs but those trials were conducted without any detailed information of used phages. Here, we report isolation of a broad-spectrum phage which showed bactericidal activity against 47.3 % of calf diarrhoeal isolates of Escherichia coli, in vitro.

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Background: Despite repeated outbreaks of poxvirus infections unique to the Indian subcontinent region and veterinary research work in this field, much less diagnostic awareness with resultant treatment protocols have been formulated in the human medical field.

Aims: With this objective in mind, a combined human medical and veterinary study was conducted on a recent outbreak of buffalopox infection in a village in northern India.

Methods: A team of doctors did the clinical examination and collected swab and serum samples from both cattle and humans, and these were subjected to viral isolation, cell culture, plaque reduction neutralization test, polymerase chain reaction, and partial genome sequencing.

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