Publications by authors named "Bi E"

The importance of CD4 T cells in cancer immunotherapy has gained increasing recognition. Particularly, a specific subset of CD4 T cells coexpressing the T helper type 1 (Th1) and Th17 markers has demonstrated remarkable antitumor potential. However, the underlying mechanisms governing the differentiation of these cells and their subsequent antitumor responses remain incompletely understood.

View Article and Find Full Text PDF
Article Synopsis
  • Alternative splicing is a cellular process in eukaryotes that produces multiple protein isoforms from a single gene, influencing protein functions and interactions.
  • The ASpdb database was developed to enhance understanding of alternative splicing by providing structures and models for over 10,000 human protein isoforms, including both canonical and alternative forms.
  • ASpdb offers detailed information on splicing events, 3D structures, sequence variations, and comparative analysis tools, making it a key resource for research in structural biology and disease mechanisms.
View Article and Find Full Text PDF
Article Synopsis
  • Bendamustine-rituximab (BR) therapy shows effectiveness in treating elderly patients with diffuse large B-cell lymphoma (DLBCL), especially when other treatments are unsuitable.
  • The study investigates the mechanisms of BR therapy through various methods, including RNA sequencing and Crispr technology, revealing that BR not only kills tumor cells by causing apoptosis but also activates the immune system via the cGAS-STING pathway.
  • The findings indicate that BR creates an inflammatory tumor environment, suggesting that combining BR with other therapies could enhance treatment outcomes for patients with DLBCL.
View Article and Find Full Text PDF

Although natural attenuation is an economic remediation strategy for uranium (U) contamination, the role of organic molecules in driving U natural attenuation in postmining aquifers is not well-understood. Groundwaters were sampled to investigate the chemical, isotopic, and dissolved organic matter (DOM) compositions and their relationships to U natural attenuation from production wells and postmining wells in a typical U deposit (the Qianjiadian U deposit) mined by neutral in situ leaching. Results showed that Fe(II) concentrations and δS and δO values increased, but U concentrations decreased significantly from production wells to postmining wells, indicating that Fe(III) reduction and sulfate reduction were the predominant processes contributing to U natural attenuation.

View Article and Find Full Text PDF
Article Synopsis
  • Laparoscopic cholecystectomy (LC) is the best method for treating gallstones but poses risks like bile duct injury (BDI); implementing the Critical View of Safety (CVS) approach could reduce these risks, yet its practical use is still low due to performance variations among surgeons.
  • The study tested an AI-assisted coaching program called SmartCoach in a randomized trial from May 2022 to August 2023, comparing the performance of novice surgeons who received AI feedback versus those who learned independently, with performance measured using the Laparoscopic Cholecystectomy Rating Form (LCRF).
  • Results indicated that surgeons in the AI coaching group significantly improved their LCRF scores over time and achieved better CVS
View Article and Find Full Text PDF

Three p-terphenyl metabolites (1-3), three indole-diterpenoids (4-6), an herbicide sesquiterpene (7), a flavonoid (8), and five other small molecules containing nitrogen (9-13) were isolated from the medicinal insect (Periplaneta americana)-derived endophytic Aspergillus taichungensis SMU01. Their chemical structures were elucidated on the basis of spectroscopic data and quantum chemical computational methods. Biological activity of these isolates in the differentiation of mouse CD4 T cell subsets was evaluated.

View Article and Find Full Text PDF
Article Synopsis
  • Alternative splicing in eukaryotes modifies pre-mRNA to produce different protein isoforms from a single gene, but there's limited data on how this affects protein structures.
  • Using AlphaFold 2, researchers analyzed the structural impacts of alternative splicing on about 3,000 human genes, discovering significant changes in protein structures, particularly in coils and beta-sheets.
  • The study highlighted important findings, including connections between alternative splicing and protein features in Septin-9, as well as potential missense mutations in Tau that may relate to Alzheimer's disease.
View Article and Find Full Text PDF

The septin cytoskeleton is extensively regulated by posttranslational modifications, such as phosphorylation, to achieve the diversity of architectures including rings, hourglasses, and gauzes. While many of the phosphorylation events of septins have been extensively studied in the budding yeast Saccharomyces cerevisiae, the regulation of the kinases involved remains poorly understood. Here, we show that two septin-associated kinases, the LKB1/PAR-4-related kinase Elm1 and the Nim1/PAR-1-related kinase Gin4, regulate each other at two discrete points of the cell cycle.

View Article and Find Full Text PDF

Coexisting tetracycline (TC), dissolved organic matter (DOM), and metal cations in aqueous environments might form complexes and consequently affect the environmental fate of TC. In this study, the interactions among coexisting humic acid (HA), TC, and Mg(II) in solutions were investigated by equilibrium dialysis batch experiments and nuclear magnetic resonance hydrogen spectroscopy (H NMR) characterization. In the binary systems, the dimethylamine (4MeNH) functional group on the A-ring of TC bound to the oxygen-containing functional groups of HA via hydrogen bond.

View Article and Find Full Text PDF

The trailing effect caused by the back diffusion (BD) of contaminants in low-permeability zones (LPZs), which prolongs remediation time and increases remediation costs, has caused widespread concern. In this study, the BD of trichloroethylene (TCE) from the LPZ to the high-permeability zone (HPZ) was determined using flow cell experiments. The anomalous variance in the BD flux of the TCE-spanning 2-4 times the deviation under identical experimental conditions, attracted our attention.

View Article and Find Full Text PDF

The shear yield stress is an important parameter for the industrial application of magnetorheological (MR) fluids. A test equipment was designed and built to perform investigations on the behaviours of compression and shear after squeeze of MR fluids. Mathematical expression of magnetic flux density was further established.

View Article and Find Full Text PDF

The interactions between organic pollutants and iron minerals play an important role in their environmental fate. In this study, the effects of low-molecular-weight organic acids (LMWOAs) on the adsorption and degradation of tetracycline (TC) on goethite were investigated. Tartaric acid (TA) was taken as the representative of LMWOAs to study the influencing mechanism through batch experiments and microscale characterization.

View Article and Find Full Text PDF

The IQGAP family of proteins plays a crucial role in cytokinesis across diverse organisms, but the underlying mechanisms are not fully understood. In this study, we demonstrate that IQGAPs in budding yeast, fission yeast, and human cells use a two-domain module to regulate their localization as well as the assembly and disassembly of the actomyosin ring during cytokinesis. Strikingly, the calponin homology domains (CHDs) in these IQGAPs bind to distinct cellular F-actin structures with varying specificity, whereas the non-conserved domains immediately downstream of the CHDs in these IQGAPs all target the division site, but differ in timing, localization strength, and binding partners.

View Article and Find Full Text PDF

The collaboration between septins and myosin-II in driving processes outside of cytokinesis remains largely uncharted. Here, we demonstrate that Bni5 in the budding yeast interacts with myosin-II, septin filaments, and the septin-associated kinase Elm1 via distinct domains at its N- and C-termini, thereby tethering the mobile myosin-II to the stable septin hourglass at the division site from bud emergence to the onset of cytokinesis. The septin and Elm1-binding domains, together with a central disordered region, of Bni5 control timely remodeling of the septin hourglass into a double ring, enabling the actomyosin ring constriction.

View Article and Find Full Text PDF

The septin cytoskeleton is extensively regulated by post-translational modifications such as phosphorylation to achieve the diversity of architectures including rings, hourglass, and gauzes. While many of the phosphorylation events of septins have been extensively studied in the budding yeast , the regulation of the kinases involved remains poorly understood. Here we show that two septin-associated kinases, the LKB1/PAR-4-related kinase Elm1 and the Nim1/PAR-1-related kinase Gin4, regulate each other at two discrete points of the cell cycle.

View Article and Find Full Text PDF

Macrophages activation is crucial in pathogenesis of rheumatic diseases like ankylosing spondylitis (AS). Circular RNAs (circRNAs)-induced macrophage-associated inflammation participates in many autoimmune diseases but remains elusive in AS. Here, we verified increased expression of circIFNGR2 in peripheral blood mononuclear cells from patients with AS and its expression levels were correlated with the AS severity.

View Article and Find Full Text PDF

The endogenetic biochar-derived dissolved organic matter (BDOM) might interact with pollutants in the environment. In this study, tetracycline (TC) was selected as the representative pollutant, and corn straw biochar (pyrolyzed at 300 °C) was used as the adsorbent. Through batch experiments and microscopic characterization, the releasing kinetics of BDOM and its effect on TC adsorption on biochar were investigated.

View Article and Find Full Text PDF

Lewis base molecules that bind undercoordinated lead atoms at interfaces and grain boundaries (GBs) are known to enhance the durability of metal halide perovskite solar cells (PSCs). Using density functional theory calculations, we found that phosphine-containing molecules have the strongest binding energy among members of a library of Lewis base molecules studied herein. Experimentally, we found that the best inverted PSC treated with 1,3-bis(diphenylphosphino)propane (DPPP), a diphosphine Lewis base that passivates, binds, and bridges interfaces and GBs, retained a power conversion efficiency (PCE) slightly higher than its initial PCE of ~23% after continuous operation under simulated AM1.

View Article and Find Full Text PDF

The high porosity of medium-coarse sand (MCS) layers in groundwater recharge areas presents a high environmental risk. Sulfamethoxazole (SMX) and trimethoprim (TMP) are two common sulfonamide antibiotics in surface water that have a high propensity to migrate into groundwater. In this study, four biochars were prepared and biochar-amended soil aquifer treatment (SAT) columns were constructed to remove SMX and TMP.

View Article and Find Full Text PDF

The adsorptive fractionation of humic acid (HA) at the interface between minerals and water can significantly affect the fate of pollutants in water-soil environment. However, the adsorptive fractionation behavior of HA on kaolinite and its effect on the migration of fluoroquinolones (FQs) have not been fully understood. In this study, fluorescence and infrared spectroscopy, combined with two-dimensional correlation analyses, were used to explore the adsorptive fractionation of humic acid (HA) and its effects on ofloxacin adsorption on kaolinite.

View Article and Find Full Text PDF

Aspertaichunol A (), a polyketide with a novel scaffold, was isolated from the medicinal insect ()-derived endophytic SMU01. Its structure was assigned on the basis of spectroscopic data and quantum chemical computational methods. Notably, possesses an uncommon tricyclo[6.

View Article and Find Full Text PDF

Background: Rhabdomyosarcoma (RMS) is the most common paediatric soft-tissue sarcoma. Approximately 15-20% of RMS cases arise from the bladder and prostate (B/P). The optimal treatment strategy for B/P RMS remains unclear.

View Article and Find Full Text PDF

Emulsified vegetable oil (EVO), as one of the novel green substrates, has been widely used in subsurface remediation. In these applications, the retention behavior of EVO presents a challenge to remediation efficiency as mechanism insights into the retention of EVO is limited. Herein, Brinell funnels experiments with X-ray microtomography (XMT) were conducted to examine the drainage and retention of nanoscale EVO in porous media, with a specific focus on investigating the impact of pore straining, grain surface roughness, and interfacial effects on Nano-EVO (NEVO) retention.

View Article and Find Full Text PDF