Engineering for chrysoeriol production using synthetic biology approaches.

Flavonoids are prevalent plant secondary metabolites with a broad range of biological activities. Their antioxidant, anti-inflammatory, and anti-cancer activities make flavonoids widely useful in a variety of industries, including the pharmaceutical and health food industries. However, many flavonoids occur at only low concentrations in plants, and they are difficult to synthesize chemically due to their structural complexity.

Tailored biosynthesis of diosmin through reconstitution of the flavonoid pathway in .

The flavonoid diosmin (diosmetin 7--rutinoside) is used as a therapeutic agent for disorders of the blood vessels such as hemorrhoids and varicose veins. Diosmin is commercially produced using semi-synthetic methods involving the oxidation of hesperidin, the most abundant flavonoid in citrus fruits. However, this method produces byproducts that are toxic to the environment, and new sustainable methods to produce diosmin are required.

Ecotoxicological effects of suspended sediments on marine microalgae using flow cytometry and pulse-amplitude modulation (PAM) fluorometry.

Microalgal bioassays were conducted to evaluate the ecotoxicological effects of suspended sediments (SS) collected from coastal environments. Growth inhibition was assessed for six microalgal species, and multiple endpoints were measured using flow cytometry (FCM) and pulse-amplitude modulation (PAM) fluorometry for three species (Dunaliella tertiolecta, Isochrysis galbana, and Phaeodactylum tricornutum). Among these, the EC50 for growth inhibition of D.

Pile driving noise impacts behavioral patterns of important East Asian juvenile marine fishes.

The surge in renewable energy demand, particularly from offshore wind farm (OWF), raises concerns about underwater noise pollution during their construction. Despite extensive studies on underwater noise impacts in European and Western countries, local species targeted investigations are crucial for global application. We assessed how pile driving noise during OWF construction affected the behavior of three juvenile Korean fishes (Lateolabrax japonicus, Acanthopagrus schlegelii, and Platichthys stellatus) prevalent in East Asian seas.

Gene editing of authentic generates dihydroflavonol-accumulating Chinese cabbage.

Flavonols are the major class of flavonoids of green Chinese cabbage ( subsp. ). The genome harbors seven genes (s), but they have not been functionally characterized.

Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model.

The anion channel SLAC1 functions as a crucial effector in the ABA signaling, leading to stomata closure. SLAC1 is activated by phosphorylation in its intracellular domains. Both a binding-activation model and an inhibition-release model for activation have been proposed based on only the closed structures of SLAC1, rendering the structure-based activation mechanism controversial.

PROTEIN PHOSPHATASE 2C08, a Negative Regulator of Abscisic Acid Signaling, Promotes Internode Elongation in Rice.

Clade A protein phosphatase 2Cs (PP2CAs) negatively regulate abscisic acid (ABA) signaling. Here, we investigated the functions of OsPP2CAs and their crosstalk with ABA and gibberellic acid (GA) signaling pathways in rice (). Among the nine OsPP2CAs, OsPP2C08 had the highest amino acid sequence similarity with OsPP2C51, which positively regulates GA signaling in rice seed germination.

A rice seed-specific glycine-rich protein OsDOR1 interacts with GID1 to repress GA signaling and regulates seed dormancy.

Seed dormancy is an important agronomic trait under the control of complex genetic and environmental interactions, which have not been yet comprehensively understood. From the field screening of rice mutant library generated by a Ds transposable element, we identified a pre-harvest sprouting (PHS) mutant dor1. This mutant has a single insertion of Ds element at the second exon of OsDOR1 (LOC_Os03g20770), which encodes a novel seed-specific glycine-rich protein.

Food web dynamics in the mangrove ecosystem of the Pearl River Estuary surrounded by megacities.

Global recognition that mangroves support coastal ecosystem services has increased; however, studies on trophic dynamics in mangrove ecosystems remain limited. We seasonally analysed the δC and δN of 34 consumers and 5 diets to elucidate the food web dynamics in the Pearl River Estuary (PRE). Fish had a large niche space during the monsoon summer, reflecting increased trophic roles.

The first national scale evaluation of total nitrogen stocks and burial rates of intertidal sediments along the entire coast of South Korea.

The regulating ecosystem services, such as water purification, that tidal flats provide by nitrogen (N) burial are being increasingly recognized; yet, quantitative estimates remain limited. Here, we first present nationwide evaluation of total N stocks and burial rates in the Korean tidal flats, based on a 3 year long monitoring assessment combined with remote sensing approach. A total of 20 intertidal flats representing 7 provinces of South Korea were extensively surveyed in 2018-20.

10 years long-term assessment on characterizing spatiotemporal trend and source apportionment of metal(loid)s in terrestrial soils along the west coast of South Korea.

Long-term trends in the spatial distributions and sources of metal(loid)s in soils adjacent to the west coastal areas of South Korea have been systematically investigated for 10 years (2010-2019). Monitoring in 17 sites clearly showed site- and region-specific distributions, being associated with land use type (significant differences, as road > agriculture > wild) (P < 0.05), rather than temporal variation.

Reconstitution of the Core ABA Signaling in Protoplasts: Transcriptional Activators.

Transient expression of genes in protoplasts has been used widely for purposes ranging from subcellular localization to promoter activity analyses. Here, we describe methods for reconstituting the abscisic acid (ABA) signaling pathway using a transient expression system in rice protoplasts. ABA signaling is monitored via reporter systems consisting of synthetic promoters and luciferase.

The Rice Abscisic Acid-Responsive RING Finger E3 Ligase OsRF1 Targets OsPP2C09 for Degradation and Confers Drought and Salinity Tolerance in Rice.

Drought and salinity are major important factors that restrain growth and productivity of rice. In plants, many really interesting new gene (RING) finger proteins have been reported to enhance drought and salt tolerance. However, their mode of action and interacting substrates are largely unknown.

Functional Characterization of , Which Determines the Typical Flavonoid Profile of Purple Chinese Cabbage.

Flavonols and anthocyanins are the two major classes of flavonoids in . To elucidate the flavonoid biosynthetic pathway in Chinese cabbage ( L. subsp), we analyzed flavonoid contents in two varieties of Chinese cabbage with normal green (5546) and purple (8267) leaves.

Modulation of Rice Leaf Angle and Grain Size by Expressing and under the Control of Promoter.

Leaf angle and grain size are important agronomic traits affecting rice productivity directly and/or indirectly through modulating crop architecture. OsBC1, as a typical bHLH transcription factor, is one of the components comprising a complex formed with LO9-177 and OsBUL1 contributing to modulation of rice leaf inclination and grain size. In the current study, two homologues of , and were functionally characterized by expressing them under the control of promoter, which is preferentially expressed in the lamina joint and the spikelet of rice.

Spatiotemporal variation of extracellular polymeric substances (EPS) associated with the microphytobenthos of tidal flats in the Yellow Sea.

The physical functions of extracellular polymeric substances (EPS), viz., by-product of microphytobenthos (MPB), in tidal flat system are well documented, but some ecological aspects remain unknown. We investigated MPB biomass (Chl-a), EPS, diatom assemblage, and erodibility in two contrasting tidal flat environments (megatidal vs.

The first national scale evaluation of organic carbon stocks and sequestration rates of coastal sediments along the West Sea, South Sea, and East Sea of South Korea.

Blue carbon science requires the estimates of organic carbon stock and sequestration rate; however, holistic data analysis remains limited in South Korea. The present study reports current organic carbon stocks and sequestration rates in the coastal areas of West Sea, South Sea, and East Sea of South Korea, encompassing entire intertidal areas using long-term field survey combined with remote sensing technology. Twenty-one intertidal flats were targeted across seven provinces (Gyeonggi, Chungnam, Jeonbuk, Jeonnam, Gyeongnam, Gyeongbuk, Gangwon).

The Transcription Factor Is Involved in the Multiple Stress Tolerance to Heat and Drought in Rice Plants.

The AP2/EREBP family transcription factors play important roles in a wide range of stress tolerance and hormone signaling. In this study, a heat-inducible rice gene was isolated and functionally characterized. The was categorized to Group-IIIc of the rice AP2/EREBP family and strongly induced by heat and drought treatment.

Reconstitution of Cytokinin Signaling in Rice Protoplasts.

The major components of the cytokinin (CK) signaling pathway have been identified from the receptors to their downstream transcription factors. However, since signaling proteins are encoded by multigene families, characterizing and quantifying the contribution of each component or their combinations to the signaling cascade have been challenging. Here, we describe a transient gene expression system in rice () protoplasts suitable to reconstitute CK signaling branches using the CK reporter construct , consisting of a synthetic CK-responsive promoter and the firefly luciferase gene, as a sensitive readout of signaling output.

OsPP2C09 Is a Bifunctional Regulator in Both ABA-Dependent and Independent Abiotic Stress Signaling Pathways.

Clade A Type 2C protein phosphatases (PP2CAs) negatively regulate abscisic acid (ABA) signaling and have diverse functions in plant development and in response to various stresses. In this study, we showed that overexpression of the rice ABA receptor OsPYL/RCAR3 reduces the growth retardation observed in plants exposed to osmotic stress. By contrast, overexpression of the OsPYL/RCAR3-interacting protein OsPP2C09 rendered plant growth more sensitive to osmotic stress.

Comparison of MALDI-TOF-MS and RP-HPLC as Rapid Screening Methods for Wheat Lines With Altered Gliadin Compositions.

The wheat gliadins are a complex group of flour proteins that can trigger celiac disease and serious food allergies. As a result, mutation breeding and biotechnology approaches are being used to develop new wheat lines with reduced immunogenic potential. Key to these efforts is the development of rapid, high-throughput methods that can be used as a first step in selecting lines with altered gliadin contents.

Stable isotope signatures reveal the significant contributions of microphytobenthos and saltmarsh-driven nutrition in the intertidal benthic food webs.

A tidal saltmarsh supporting marine ecosystem services becomes more recognized, but an understanding of its trophic dynamics is far limited. We investigated the benthic food-web dynamics in Ganghwa tidal flat, a representative tidal saltmarsh of South Korea. The stable carbon and nitrogen isotope ratio values were analyzed for the sixteen species of macrobenthos and their potential food sources such as microphytobenthos (MPB) and various organic matters.

Ectopic Expression of OsPYL/RCAR7, an ABA Receptor Having Low Signaling Activity, Improves Drought Tolerance without Growth Defects in Rice.

Overexpression of abscisic acid (ABA) receptors has been reported to enhance drought tolerance, but also to cause stunted growth and decreased crop yield. Here, we constructed transgenic rice for all monomeric ABA receptors and observed that only transgenic rice over-expressing showed similar phenotype with wild type, without total yield loss when grown under normal growth condition in a paddy field. Even though transgenic rice over-expressing / showed neither an ABA-sensitivity nor an osmotic stress tolerance in plate assay, it showed drought tolerance.

Natural purification capacity of tidal flats for organic matters and nutrients: A mesocosm study.

The regulating services by natural tidal flats to purify organic pollutants are increasingly recognized, but a quantitative assessment is very limited. We developed a mesocosm system to determine removal efficiency of organic matters and nutrients by simulating a natural tidal condition. The tidal flat sediments significantly removed waterborne organic pollutants to background levels in ~2 and 6-7 days for COD and TP, respectively.