Publications by authors named "Benjamin G Jackson"

Maternal effects (i.e. trans-generational plasticity) and soil legacies generated by drought and plant diversity can affect plant performance and alter nutrient cycling and plant community dynamics.

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Article Synopsis
  • Research on plant traits suggests that above-ground characteristics like leaf nitrogen content are important for predicting ecosystem functions such as productivity and carbon storage.
  • The study examined both above- and below-ground plant traits in temperate grassland to see how they relate to each other and to soil properties and ecosystem carbon fluxes.
  • Findings indicated that while some relationships between above- and below-ground traits were evident in monocultures, they weakened or disappeared in mixed communities, highlighting the complexity of predicting ecosystem behaviors in diverse plant settings.
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Article Synopsis
  • - The study explores how different types of fungi in the soil (pathogenic, mycorrhizal, and saprotrophic) affect plant-soil interactions and vegetation dynamics in temperate grasslands.
  • - Plants with resource-acquisitive traits (like high nitrogen and thin roots) attract more pathogenic and saprotrophic fungi, leading to reduced growth when grown in their own soil.
  • - Soil properties also influence these interactions, with fertile soils fostering negative relationships between fungi and plants, helping to improve our understanding of plant-soil feedbacks and their impact on ecosystem dynamics.
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There are numerous ways in which plants can influence the composition of soil communities. However, it remains unclear whether information on plant community attributes, including taxonomic, phylogenetic, or trait-based composition, can be used to predict the structure of soil communities. We tested, in both monocultures and field-grown mixed temperate grassland communities, whether plant attributes predict soil communities including taxonomic groups from across the tree of life (fungi, bacteria, protists, and metazoa).

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Background: The de novo assembly of genomes and transcriptomes from short sequences is a challenging problem. Because of the high coverage needed to assemble short sequences as well as the overhead of modeling the assembly problem as a graph problem, the methods for short sequence assembly are often validated using data from BACs or small sized prokaryotic genomes.

Results: We present a parallel method for transcriptome assembly from large short sequence data sets.

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