Publications by authors named "Ben-Ami R"

Background: Infections with fluconazole-resistant Candida parapsilosis have been increasing in Israeli hospitals with unclear implications for patient outcomes.

Objectives: To determine the frequency, mechanisms, molecular epidemiology, and outcomes of azole-resistant C. parapsilosis bloodstream infections in four hospitals in Israel.

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Background: Phage therapy offers a promising alternative for treating serious infections, including diabetic foot ulcers (DFUs), through the lytic action of phages. This randomized double-blind study was conducted to evaluate the safety and tolerability of the TP-102 bacteriophage cocktail in patients with DFUs non-infected and infected with Staphylococcus aureus, Pseudomonas aeruginosa, and/or Acinetobacter baumannii.

Methods: Nineteen participants with DFUs were randomized after susceptibility testing.

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NKG2D is a central activating receptor involved in target recognition and killing by Natural Killer and CD8 T cells. The known role of NKG2D is to recognize a family of self-induced stress ligands that are upregulated on stressed cells such as cancerous or virally infected cells. Fungal pathogens are a major threat to human health, infecting more than a billion patients yearly and becoming more common and drug resistant.

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  • A study in Israel aimed to determine the rates and risk factors for bacterial co-infection in severe COVID-19 patients, analyzing data from over 1,000 cases from March 2020 to May 2022.
  • Of the patients studied, only 5.9% had a confirmed bacterial infection at admission, indicating that co-infection rates can vary greatly among individuals with severe COVID-19.
  • A clinical prediction model was developed that achieved high accuracy and could enhance appropriate antibiotic use while reducing unnecessary prescriptions, thus aiding early treatment decisions without compromising patient outcomes.
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Background: Bats are recognized as the natural reservoir of several zoonotic viruses that pose a threat to public health worldwide. In our recent reports we describe the identification of a novel poxvirus, IsrRAPXV, in Egyptian fruit bats. This poxvirus is associated with high morbidity and mortality in bats.

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Covid-19 disease is implicated in increased mortality among immunocompromised patients. The JAK inhibitor, baricitinib (bar), or the IL-6 inhibitor, tocilizumab (toc), demonstrated a survival benefit in patients with severe disease.However, evidence supporting their use in immunocompromised patients with severe Covid-19 is scarce.

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Invasive candidiasis is a rising global health threat with increasing incidence, persistently high mortality, and diminishing treatment options. Antifungal resistance has rapidly emerged and spread, with multidrug-resistant species deemed an urgent and serious threat. While acknowledging the key role of antifungal stewardship and infection control in curbing spread, we examine the role of antifungal monotherapy in driving resistance and the potential for combination therapy to prevent stress adaptation and emergence of drug resistance.

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Background: Early reports described an increased risk of herpes zoster following receipt of mRNA-based COVID-19 vaccines. The objective was to assess whether COVID-19 vaccine is associated with varicella-zoster virus-induced neurologic disease (VZV-ND).

Methods: This multicenter retrospective case-control study with a test-negative design was conducted at 12 hospitals in Israel.

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Background: Immunocompromised patients with impaired humoral immunity are at risk for persistent COVID-19 (pCOVID), a protracted symptomatic disease with active viral replication.

Objectives: To establish a national consensus statement on the diagnosis, treatment, management, isolation, and prevention of pCOVID in adults.

Sources: We base our suggestions on the available literature, our own experience, and clinical reasoning.

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Study Objectives: Immunity is influenced by sleep and the circadian rhythm. Healthcare workers are predisposed to both insufficient sleep and circadian disruption. This study aimed to evaluate the relationship between sleep and work characteristics and the antibody response to the mRNA SARS-CoV-2 vaccine BNT162b2.

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Mucormycosis presents a formidable challenge to clinicians and researchers. Animal models are an essential part of the effort to decipher the pathogenesis of mucormycosis and to develop novel pharmacotherapeutics against it. Diverse model systems have been established, using a range of animal hosts, immune and metabolic perturbations, and infection routes.

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Regulatory T cells (Tregs) are a key determinant for the immunosuppressive and premetastatic niche for cancer progression after surgery resection. However, the precise mechanisms regulating Tregs function during surgical stress-facilitated cancer metastasis remain unknown. This study aims to unravel the mechanisms and explore potential strategies for preventing surgical stress-induced metastasis by targeting NEDD8.

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  • Scientists are looking for better ways to detect pancreatic cancer early so it can be treated more effectively.
  • They studied blood samples from 426 patients to find different markers that could indicate pancreatic cancer compared to other conditions.
  • Results showed that a mix of certain protein markers and DNA changes in the blood can help identify early-stage pancreatic cancer better than just using one marker alone.
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Circulating cell-free DNA (cfDNA) fragments are a biological analyte with extensive utility in diagnostic medicine. Understanding the source of cfDNA and mechanisms of release is crucial for designing and interpreting cfDNA-based liquid biopsy assays. Using cell type-specific methylation markers as well as genome-wide methylation analysis, we determine that megakaryocytes, the precursors of anuclear platelets, are major contributors to cfDNA (~26%), while erythroblasts contribute 1-4% of cfDNA in healthy individuals.

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In hemato-oncological patients, COVID-19 can present as a persistent infection with ongoing symptoms and viral replication over a prolonged period of time. Data are scarce on the preferred treatment options for these patients. We describe our experience with a five-day course of dual anti-viral treatment with remdesivir and nirmatrelvir/ritonavir for hemato-oncological immunocompromised patients with persistent COVID-19.

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  • - The study aimed to evaluate the clinical significance of Dientamoeba fragilis (DF) and Blastocystis species (Bs) in human stool samples, focusing on their impact on symptoms and clinical outcomes post-testing.
  • - An observational analysis of 27,918 patients showed that 22.3% tested positive for DF and 19.2% for Bs, but symptom incidence before testing was similar across groups, and no significant differences in clinical outcomes were found afterward.
  • - The findings suggest that positive results for DF or Bs in stool PCR do not correlate with any notable clinical symptoms or treatment responses in patients, indicating limited clinical relevance.
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  • - Fosmanogepix is a new antifungal medication targeting Gwt1 enzyme, effective against various fungal infections, including drug-resistant ones, available for both IV and oral use.
  • - A study evaluated its safety and efficacy in treating candidaemia in adults without neutropenia, administering fosmanogepix for 14 days and measuring treatment success through blood culture clearance and survival rates.
  • - The results showed an 80% treatment success rate with good tolerance and no serious side effects, indicating fosmanogepix's potential as a safe and effective option for treating candidaemia.
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The optimal duration of empiric antimicrobial therapy of febrile neutropenia in patients after cellular therapy is unclear. Early deescalation has been suggested by some authorities; however, data are lacking for cellular therapy recipients. We performed a randomized controlled study of cellular therapy recipients with febrile neutropenia to evaluate the safety and noninferiority of an early deescalation and discontinuation antibiotic strategy (EDD arm) versus standard broad-spectrum antibiotic treatment until recovery of neutropenia (standard duration arm).

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  • A recent study examined the use of PASA16 phage therapy in 16 patients with stubborn Pseudomonas aeruginosa infections, highlighting the largest compassionate-use series of its kind.
  • The phages were administered either intravenously or topically, showing good results in 13 out of 15 cases, with only minor side effects reported.
  • The findings suggest that combining PASA16 with traditional antibiotics is a promising option for patients who haven't responded to standard treatments, paving the way for future clinical trials.
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We report an outbreak of Candida auris across multiple healthcare facilities in Israel. For the period of May 2014-May 2022, a total of 209 patients with C. auris infection or colonization were identified.

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is a mainly zoonotic pathogen, a common cause of bovine mastitis. It is however rarely pathogenic in humans, with only few cases reported in the literature. We present the first reported case of neurosurgical site infection due to , resulting in a brain abscess.

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  • Macrophages infected with Candida auris show metabolic changes, increasing glycolysis but not producing a strong immune response (IL-1β) or stopping the growth of the pathogen.
  • C. auris can evade the immune system by using its own metabolism to thrive and kills macrophages through metabolic stress caused by glucose starvation.
  • The pathogen does not activate the NLRP3 inflammasome, leading to low inflammatory responses, indicating that targeting metabolism in both host and pathogen could offer new treatment options for C. auris infections.
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Antimicrobial resistance (AMR) has consistently been linked to antibiotic use. However, the roles of commonly prescribed non-antimicrobial drugs as drivers of AMR may be under-appreciated. Here, we studied a cohort of patients with community-acquired pyelonephritis and assessed the association of exposure to non-antimicrobial drugs at the time of hospital admission with infection with drug-resistant organisms (DRO).

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  • * There is a growing concern about the emergence of resistance to first-line antifungals, particularly azoles, which complicates treatment options and results in even higher mortality rates for resistant infections.
  • * Some A. fumigatus isolates show persistence to voriconazole, allowing them to survive and grow even in the presence of high drug levels; this persistence appears to be an active response and could be a significant factor in treatment failure for patients with aspergillosis.
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