Identifying Major Factors for Success and Failure of Conservation Programs in Europe.

In Europe, various conservation programs adopted to maintain or restore biodiversity have experienced differing levels of success. However, a synthesis about major factors for success of biodiversity-related conservation programs across ecosystems and national boundaries, such as incentives, subsidies, enforcement, participation, or spatial context, is missing. Using a balanced scorecard survey among experts, we analyzed and compared factors contributing to success or failure of three different conservation programs: two government programs (Natura 2000 and the ecological measures of the Water Framework Directive) and one conservation program of a non-governmental organization (NGO; Rewilding Europe), all focusing on habitat and species conservation.

Advancing Zebrafish Husbandry: Takeaways From the 2024 Husbandry Workshop and Husbandry Summit.

The 2024 Zebrafish Husbandry Workshop and Summit held during the World Aquaculture Society Meeting in San Antonio focused on key areas for improving zebrafish husbandry research. Discussions highlighted the need for comprehensive literature on husbandry, better communication and collaboration between researchers and facility staff, and the adoption of a standardized reference diet. Current literature lacks comprehensive data and often overlooks crucial factors such as housing density and space requirements for fish development.

The type of forest edge shapes snail assemblages at forest-pasture transitions.

Semi-natural, nutrient-poor calcareous grasslands are local biodiversity hotspots that are increasingly threatened by land use intensification, abandonment, or indirect effects from adjacent habitats. The habitat quality of these grasslands is often influenced by neighbouring forests or intensively managed agricultural land. For example, shrubs encroaching on grassland reduce the sensitive habitat, but at the same time represent a new habitat type (transition zone at gradual forest edge).

Predicting patient-specific enhancer-promoter interactions.

Computational methods that can predict hard-to-measure modalities from those that are easier to measure, in a patient-specific manner, play a critical role in personalized medicine. In this issue of Cell Reports Methods, Khurana et al. present differential gene targets of accessible chromatin (DGTAC), an approach which predicts patient-specific enhancer-promoter interactions.

Leveraging epigenomes and three-dimensional genome organization for interpreting regulatory variation.

Understanding the impact of regulatory variants on complex phenotypes is a significant challenge because the genes and pathways that are targeted by such variants and the cell type context in which regulatory variants operate are typically unknown. Cell-type-specific long-range regulatory interactions that occur between a distal regulatory sequence and a gene offer a powerful framework for examining the impact of regulatory variants on complex phenotypes. However, high-resolution maps of such long-range interactions are available only for a handful of cell types.

Invasion of a Horticultural Plant into Forests: Affects Native Above-Ground Vegetation and Soil Properties.

Horticultural trade is considered the most important pathway for the introduction of non-native plant species. Numerous horticultural plants are spreading from private gardens and public green space into natural habitats and have the potential to alter native biodiversity and ecosystem functioning. We assessed the invasiveness of the horticultural plant subsp.

Rewiring of the 3D genome during acquisition of carboplatin resistance in a triple-negative breast cancer patient-derived xenograft.

Changes in the three-dimensional (3D) structure of the genome are an emerging hallmark of cancer. Cancer-associated copy number variants and single nucleotide polymorphisms promote rewiring of chromatin loops, disruption of topologically associating domains (TADs), active/inactive chromatin state switching, leading to oncogene expression and silencing of tumor suppressors. However, little is known about 3D changes during cancer progression to a chemotherapy-resistant state.

Poverty, undernutrition and morbidity: The untold story of tea-garden workers of Alipurduar district, West Bengal.

Background: There is a paucity of information on health and nutritional status of tea-garden workers of West Bengal, which is crucial to meet their health needs by formulating appropriate public health interventions.

Objectives/aims: The objective of this study is to assess the morbidity pattern and nutritional status of tea-garden workers of West Bengal, India.

Materials And Methods: The present cross-sectional study was conducted among 463 tea-garden workers of randomly selected three tea gardens of Alipurduar district of West Bengal, India, chosen by multi-stage sampling.

Six groups of ground-dwelling arthropods show different diversity responses along elevational gradients in the Swiss Alps.

Elevational gradients along mountain slopes offer opportunities to study key factors shaping species diversity patterns. Several environmental factors change over short distances along the elevational gradient in predictable ways. However, different taxa respond to these factors differently resulting in various proposed models for biodiversity patterns along elevational transects.

Deciphering the Role of 3D Genome Organization in Breast Cancer Susceptibility.

Cancer risk by environmental exposure is modulated by an individual's genetics and age at exposure. This age-specific period of susceptibility is referred to as the "Window of Susceptibility" (WOS). Rats have a similar WOS for developing breast cancer.

Functional diversity and habitat preferences of native grassland plants and ground-dwelling invertebrates in private gardens along an urbanization gradient.

Urbanization is occurring around the globe, changing environmental conditions and influencing biodiversity and ecosystem functions. Urban domestic gardens represent a small-grained mosaic of diverse habitats for numerous species. The challenging conditions in urban gardens support species possessing certain traits, and exclude other species.

Trend, morbidity profile and immunization status of diphtheria admitted cases: A 5-years review from a sentinel centre in Kolkata.

Despite strengthening of the universal immunization program, diphtheria remains endemic in India. Diphtheria is under surveillance for vaccine-preventable diseases of the World Health Organization and also in India. The present record-based retrospective study was conducted on 241 confirmed diphtheria patients admitted in an infectious disease hospital of Kolkata over 5 years (2015-2019) with the objectives of assessing the admission trend, immunization status, and outcome of patients.

Saproxylic insects and fungi in deciduous forests along a rural-urban gradient.

Urbanization is increasing worldwide and is regarded a major threat to biodiversity in forests. As consequences of intensive human use, the vegetation structure of naturally growing urban forests and their amount of deadwood can be reduced. Deadwood is an essential resource for various saproxylic insects and fungi.

Data integration for inferring context-specific gene regulatory networks.

Transcriptional regulatory networks control context-specific gene expression patterns and play important roles in normal and disease processes. Advances in genomics are rapidly increasing our ability to measure different components of the regulation machinery at the single-cell and bulk population level. An important challenge is to combine different types of regulatory genomic measurements to construct a more complete picture of gene regulatory networks across different disease, environmental, and developmental contexts.

Ground-dwelling invertebrate diversity in domestic gardens along a rural-urban gradient: Landscape characteristics are more important than garden characteristics.

Urbanisation is increasing worldwide and is regarded a major driver of environmental change altering local species assemblages. Private domestic gardens contribute a significant share of total green area in cities, but their biodiversity has received relatively little attention. Previous studies mainly considered plants, flying invertebrates such as bees and butterflies, and birds.

The Cancer-Associated Genetic Variant Rs3903072 Modulates Immune Cells in the Tumor Microenvironment.

Genome-wide association studies (GWAS) have hitherto identified several germline variants associated with cancer susceptibility, but the molecular functions of these risk modulators remain largely uncharacterized. Recent studies have begun to uncover the regulatory potential of noncoding GWAS SNPs using epigenetic information in corresponding cancer cell types and matched normal tissues. However, this approach does not explore the potential effect of risk germline variants on other important cell types that constitute the microenvironment of tumor or its precursor.

Diverse effects of degree of urbanisation and forest size on species richness and functional diversity of plants, and ground surface-active ants and spiders.

Urbanisation is increasing worldwide and is regarded a major driver of environmental change altering local species assemblages in urban green areas. Forests are one of the most frequent habitat types in urban landscapes harbouring many native species and providing important ecosystem services. By using a multi-taxa approach covering a range of trophic ranks, we examined the influence of degree of urbanisation and forest size on the species richness and functional diversity of plants, and ground surface-active ants and spiders.

Genetic Fine-Mapping and Identification of Candidate Genes and Variants for Adiposity Traits in Outbred Rats.

Objective: Obesity is a major risk factor for multiple diseases and is in part heritable, yet the majority of causative genetic variants that drive excessive adiposity remain unknown. Here, outbred heterogeneous stock (HS) rats were used in controlled environmental conditions to fine-map novel genetic modifiers of adiposity.

Methods: Body weight and visceral fat pad weights were measured in male HS rats that were also genotyped genome-wide.

Quantitative and correlative biodistribution analysis of Zr-labeled mesoporous silica nanoparticles intravenously injected into tumor-bearing mice.

The biodistribution of Zr-labeled mesoporous silica nanoparticles (MSNs) was evaluated in detail using a prostate cancer mouse model bearing LNCaP C4-2 and PC-3 tumor xenografts with focus on passive targeting. PEGylation of radiolabeled MSNs significantly improved the blood circulation times and radically enhanced the accumulation in tumors comparable to the accumulation levels previously reported for similar but actively targeted particles. The distribution of the passively targeted MSNs was related to the degree of vascularization of the tumors and did not follow the trends observed in vitro.

ProcessDriver: A computational pipeline to identify copy number drivers and associated disrupted biological processes in cancer.

Copy number amplifications and deletions that are recurrent in cancer samples harbor genes that confer a fitness advantage to cancer tumor proliferation and survival. One important challenge in computational biology is to separate the causal (i.e.

The database of the PREDICTS (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems) project.

The PREDICTS project-Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.

Dynamics of Reintroduced Populations of Oedipoda caerulescens (Orthoptera, Acrididae) over 21 Years.

Conservation programs increasingly involve the reintroduction of animals which otherwise would not recolonize restored habitats. We assessed the long-term success of a project in which the Blue-winged grasshopper, Oedipoda caerulescens (L., 1758), was reintroduced to a nature reserve in Northwestern Switzerland, an alluvial gravel area where the species went extinct in the 1960s.