Publications by authors named "Bart Panis"

Progressive loss of plant diversity requires the protection of wild and agri-/horticultural species. For species whose seeds are extremely short-lived, or rarely or never produce seeds, or whose genetic makeup must be preserved, cryopreservation offers the only possibility for long-term conservation. At temperatures below freezing, most vegetative plant tissues suffer severe damage from ice crystal formation and require protection.

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Unlabelled: Collection and storage of crop wild relative (CWR) germplasm is crucial for preserving species genetic diversity and crop improvement. Nevertheless, much of the genetic variation of CWRs is absent in ex situ collections and detailed passport data are often lacking. Here, we focussed on one of the two main progenitor species of many banana cultivars.

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Article Synopsis
  • Storing seed collections of crop wild relatives is crucial for food security, but banana and plantain wild relatives are under-represented in genebanks despite their importance.
  • Data from 13 institutions across 10 countries revealed 537 seed accessions, but these had low viability rates (25% mean) and highlighted challenges in seed storage, germination, and sourcing suitable materials.
  • A conservation assessment indicated that 51% of banana crop wild relatives are not represented in seed collections, prompting recommendations for improved collecting and management strategies to enhance conservation efforts.
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The ability of seeds to withstand drying is fundamental to seed conservation but drying responses are not well known for most wild species including crop wild relatives. We look at drying responses of seeds of and , the two primary wild relatives of bananas and plantains, using the following four experimental approaches: (i) We equilibrated seeds to a range of relative humidity (RH) levels using non-saturated lithium chloride solutions and subsequently measured moisture content (MC) and viability. At each humidity level we tested viability using embryo rescue (ER), tetrazolium chloride staining and germination in an incubator.

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is one of the most important fungal genera of plant pathogens that affect the cultivation of a wide range of crops. Agricultural losses caused by Fusariumoxysporumf.sp.

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Article Synopsis
  • Research on seed germination is often limited by the availability of seeds and suitable environments, especially when done far from the species' native habitats.
  • Using glasshouses in botanic gardens can mimic natural conditions, allowing for valuable insights into germination processes, as demonstrated through tests on banana crop wild relatives.
  • Findings show that direct solar radiation significantly enhances seed germination, with burial depth having a lesser impact, and optimal temperatures (23-35℃) being crucial for successful germination.
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The coconut palm or "tree of life" is one of nature's most useful plants and the demand for its fruit is increasing. However, coconut production is threatened by ageing plantations, pests and diseases. Currently, the palm is exclusively propagated via seeds, limiting the amount of planting material.

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Background: Conservation of plant genetic resources, including the wild relatives of crops, plays an important and well recognised role in addressing some of the key challenges faced by humanity and the planet including ending hunger and biodiversity loss. However, the genetic diversity and representativeness of ex situ collections, especially that contained in seed collections, is often unknown. This limits meaningful assessments against conservation targets, impairs targeting of future collecting and limits their use.

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  • Crop wild relatives (CWR) like Musa balbisiana are crucial for enhancing traits in cultivated crops, yet their genetic diversity has been under-researched.
  • The study evaluated the genetic variation among 17 populations of Musa balbisiana in Vietnam and six in China using SSR markers, finding significant genetic diversity, especially in central Vietnam and China.
  • Northern Vietnam populations displayed unique genetic characteristics compared to those from China, suggesting the need for conservation efforts focused on populations in central Vietnam and northern Vietnam's Hoang Lien Son mountain range.
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Seed banks were first established to conserve crop genetic diversity, but seed banking has more recently been extended to wild plants, particularly crop wild relatives (CWRs) (e.g., by the Millennium Seed Bank (MSB), Royal Botanic Gardens Kew).

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The conservation of crop genetic resources, including their wild relatives, is of utmost importance for the future of mankind. Most crops produce orthodox seeds and can, therefore, be stored in seed genebanks. However, this is not an option for crops and species that produce recalcitrant (non-storable) seeds such as cacao, coffee and avocado, for crops that do not produce seeds at all; therefore, they are inevitably vegetatively propagated such as bananas, or crops that are predominantly clonally propagated as their seeds are not true to type, such as potato, cassava and many fruit trees.

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Epigenetic change is considered relatively unstable and short-lived, raising questions of its contribution to long-term adaptive potential. However, epigenetic modifications can accumulate in the presence of environmental stress, resulting in beneficial epigenetic memories where environments are challenging. Diverging epigenetic memories have been observed across large spatial scales, and can persist through multiple generations.

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The recent emergence of the fungus Fusarium oxysporum f. sp. cubense tropical race 4 (Foc TR4), the deadly strain that causes Fusarium wilt of banana, has put the banana production chain for export under threat.

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Ex situ seed conservation of banana crop wild relatives ( spp. L.), is constrained by critical knowledge gaps in their storage and germination behaviour.

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Sweet potato (Ipomoea batatas) is one of the ten most important staple crops and provides a livelihood for many people around the globe. To adapt to ever-changing circumstances farmers and breeders need to have access to a broad diversity of germplasm. This study focuses on the development of a cryopreservation protocol that allows the long term storage of different sweet potato cultivars.

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Background & Aims: The bacterial leaf nodule symbiosis is an interaction where bacteria are housed in specialised structures in the leaves of their plant host. In the Rubiaceae plant family, host plants interact with Burkholderia bacteria. This interaction might play a role in the host plant defence system.

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Cryopreservation is a process whereby biological structures are preserved in liquid nitrogen (-196 °C) without losing their viability. Many cryopreservation techniques use the Plant Vitrification Solution 2 (PVS2) for cryoprotection. This study will therefore evaluate the influence of different exposure times to the cryoprotectant PVS2 and discuss the importance of the mobilization of reserves and the antioxidant metabolism during the germination of cryopreserved Passiflora ligularis embryos.

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Background And Aims: The bacterial leaf nodule symbiosis is a close interaction between endophytes and their plant hosts, mainly within the coffee family. The interaction between Rubiaceae species and Burkholderia bacteria is unique due to its obligate nature, high specificity, and predominantly vertical transmission of the endophytes to the next generation of host plants. This vertical transmission is intriguing since it is the basis for the uniqueness of the symbiosis.

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Article Synopsis
  • Coffee is a crucial global crop with two primary species that take a long time to breed traditionally, highlighting the need for innovative solutions in cultivation.
  • Biotechnological methods like somatic embryogenesis (SE), despite their potential, face challenges due to their dependence on specific genotypes, necessitating tailored approaches for different cultivars.
  • The review suggests that integrating advanced omics technologies with biotechnology could enhance SE processes and encourage more research to overcome current limitations.
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Cryopreservation is the technology of choice not only for plant genetic resource preservation but also for virus eradication and for the efficient management of large-scale micropropagation. In this chapter, we describe three cryopreservation protocols (standard vitrification, droplet vitrification, and encapsulation vitrification) for date palm highly proliferating meristems that are initiated from vitro-cultures using plant growth regulator-free MS medium. The positive impact of sucrose preculture and cold hardening treatments on survival rates is significant.

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  • Meloidogyne incognita is a significant agricultural parasite that disrupts plant health by forming feeding sites in root systems, affecting gene expression.
  • A high-throughput proteomics study was conducted to explore the interaction between banana plants and M. incognita, marking a crucial first step toward developing natural resistance to this nem
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The aim of this study was to examine the nematicidal properties of two defence inducers against the root-knot nematode Meloidogyne incognita. A direct-contact bioassay was applied to evaluate the nematicidal effects of acibenzolar-S-methyl (ASM) and methyl jasmonate (MEJA) on second-stage juveniles (J2). Nematodes were incubated in different concentrations of these compounds, and the numbers of immobile nematodes were counted after 24 and 48 h post incubation.

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  • Somatic embryogenesis is a process where new embryos are created from somatic tissues, useful for large-scale cloning and genetic engineering, while also providing insights into molecular changes during embryogenesis.
  • The study identified 1052 unique proteins in two embryogenic cell suspensions, describing their functions and creating two protein networks related to stress response and embryogenic capacity using Cytoscape.
  • This research offers the first extensive proteome analysis of embryogenic cell suspensions in coffee, aiding the understanding of somatic embryogenesis and enhancing protein annotation in this non-model crop, with all data accessible via ProteomeXchange (PXD002963).
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Arbuscular mycorrhizal fungi (AMF) are obligate root symbionts that can protect their host plant against biotic stress factors such as plant-parasitic nematode (PPN) infection. PPN consist of a wide range of species with different life styles that can cause major damage in many important crops worldwide. Various mechanisms have been proposed to play a role in the biocontrol effect of AMF against PPN.

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