Publications by authors named "Audergon J"

Considering the urgent need for more sustainable fruit tree production, it is high time to find durable alternatives to the systematic use of phytosanitary products in orchards. To this end, resilience can deliver a number of benefits. Relying on a combination of tolerance, resistance, and recovery traits, disease resilience appears as a cornerstone to cope with the multiple pest and disease challenges over an orchard's lifetime.

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As part of a virome characterization of species, a novel cheravirus was discovered in two wild species, and , and in an apricot () accession. The sequence of the two genomic RNAs was completed for two isolates. The Pro-Pol conserved region showed 86% amino acid (aa) identity with the corresponding region of trillium govanianum cheravirus (TgCV), a tentative member, whereas the combined coat proteins (CPs) shared only 40% aa identity with TgCV CPs, well below the species demarcation threshold for the genus.

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  • Tunisia has unique seed-propagated apricot varieties found in its oasis agroecosystems, which are important for genetic diversity.
  • A study genotyped 33 apricot accessions from six regions, revealing 111 alleles and identifying four key genetic groupings related to geographic origin.
  • The findings emphasize the high genetic diversity and low differentiation among Tunisian apricots, which is vital for breeding programs that adapt to arid climates.
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  • The apricot tree (Prunus armeniaca) serves as a useful model for studying how plants evolve and adapt, with the analysis of nearly 600 apricot genomes leading to significant findings.
  • There are two main genetic groups of apricots, Chinese and European, each having high genetic diversity due to separate domestication from distinct Central Asian wild populations and some gene mixing afterward.
  • Although both groups show similar physical traits, they have different regions of their genomes influenced by natural selection, particularly in areas related to life cycles, fruit quality, and disease resistance, with European apricots exhibiting more selection signals overall.
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  • Genomic selection (GS) is a breeding method that uses comprehensive genetic data to improve genetic progress in crops and livestock, and this study explores its application in enhancing postharvest quality of apricots.
  • The research involved a specific population of apricot trees, assessing 153 individuals for various fruit traits over two years under different climates, finding that certain genomic models, particularly RR-BLUP, provided the most accurate predictions of traits like ethylene production.
  • The study reveals key insights into the genetics of apricot quality, suggesting that integrating this genetic knowledge can optimize breeding strategies, particularly for traits influenced by significant genetic factors.
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The changes of texture and cell wall characteristics of apricot were investigated in ten clones at two maturity stages. Fruit firmness, cell wall composition and enzyme activity of three apricot flesh zones were analysed. The AIS (alcohol-insoluble solids) were characterised by high amounts of uronic acid (179-300 mg g AIS) and relatively high amounts of cellulosic glucose (118-214 mg g AIS).

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The characterization of the largest worldwide representative data set of apricot ( L.) germplasm was performed using molecular markers. Genetic diversity and structure of the cultivated apricot genetic resources were analyzed to decipher the history of diffusion of this species around the world.

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Dormancy is a physiological state that plants enter for winter hardiness. Environmental-induced dormancy onset and release in temperate perennials coordinate growth cessation and resumption, but how the entire process, especially chilling-dependent dormancy release and flowering, is regulated remains largely unclear. We utilized the transcriptome profiles of floral buds from fall to spring in apricot () genotypes with contrasting bloom dates and peach () genotypes with contrasting chilling requirements (CR) to explore the genetic regulation of bud dormancy.

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Trees use many mechanisms to adapt and respond to stressful conditions. The phenylpropanoid pathway in particular is known to be associated with a diverse suite of plant stress responses. In this study, we explored the relationship between the phenylpropanoid pathway metabolite production, gene expression and adaptive trait variation associated with floral bud reactivation during and following dormancy in Prunus armeniaca L.

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  • Pseudomonas syringae causes significant diseases in fruit trees, particularly apricot bacterial canker, which is hard to control due to limited preventive measures and unclear genetic resistance patterns.
  • Researchers conducted a four-year study on 73 apricot accessions, measuring their susceptibility to canker through artificial inoculations and employing genome-wide association study methods to analyze genetic factors linked to resistance.
  • The study identified 11 significant associations across 7 key loci, highlighting two major loci on chromosomes 5 and 6 that explain a large portion of the phenotypic variance, suggesting co-adaptive genetic strategies in response to environmental selection pressures.
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Apricot polyphenols and carotenoids were monitored after industrial and domestic cooking, and after 2months of storage for industrial processing. The main apricot polyphenols were flavan-3-ols, flavan-3-ol monomers and oligomers, with an average degree of polymerization between 4.7 and 10.

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  • - The study addresses limitations in identifying individual genes associated with traits in fruit trees by using genome-wide association (GWA) mapping in apricot for Plum Pox Virus (PPV) resistance.
  • - It leverages the genetic diversity of apricot germplasm and utilizes next-generation sequencing alongside the peach genome reference for identifying single nucleotide polymorphisms (SNPs).
  • - The findings validate existing resistance QTL intervals and identify new potential resistance loci, demonstrating the effectiveness of GWA in pinpointing candidate genes for further research.
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In order to optimize the management of genetic resources, in most cases a representative sample of the germplasm collections needs to be developed. The establishment of a core collection is thus of major importance either to minimize the cost associated with the management of the associated germplasm or to apply analysis onto representative bases. In order to select a representative core collection among the Tunisian apricot germplasm of 110 accessions large, the Maximization strategy algorithm was used.

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The present study investigates the genetic determinism of flowering and maturity dates, two traits highly affected by global climate change. Flowering and maturity dates were evaluated on five progenies from three Prunus species, peach, apricot and sweet cherry, during 3-8 years. Quantitative trait locus (QTL) detection was performed separately for each year and also by integrating data from all years together.

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  • The study examines the loss of genetic diversity in domesticated apricots introduced to the Mediterranean, tracing their origins primarily to China and analyzing various regional gene pools.
  • The researchers identified three main genetic clusters of Mediterranean apricots and found that one genetic marker showed significant deviation from expected frequencies, suggesting some loss of diversity due to domestication.
  • The findings highlight a notable reduction in allelic richness from the 'Irano-Caucasian' gene pool, indicating multiple diffusion routes into the northern and southwestern Mediterranean regions.
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  • Apricot was introduced to the Mediterranean from China and Asia, with a focus on Tunisia's genetic origins and introduction points.
  • A study genotyped 82 apricot samples, revealing 135 alleles and identifying five distinct genetic clusters based on geographic origin.
  • Results indicate two gene pools in Tunisia (grafted and seed propagated apricots) with a narrow genetic basis but a shared origin between them.
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We have investigated the effect of cultivation systems and fruit post-harvest management on the antioxidant properties of apricot fruits. Trees of five cultivars 'Tyrinthos', 'Cafona', 'Bella d'Italia', 'Vitillo' and 'Pellecchiella' were cultivated under integrated and organic systems. Fruits were collected at full maturity stage and analyzed either immediately or after storage at 4+/-0.

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  • Carotenoids in apricots are important for their color and health benefits, but traditional measurement methods are costly and destructive.
  • Researchers assessed rapid, nondestructive techniques like colorimeter measurements and infrared spectroscopy for determining carotenoid levels in forty apricot genotypes.
  • Results showed a strong correlation between carotenoid content and color measurements, allowing for the development of reliable regression equations, while infrared spectroscopy methods were less effective.
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In order to elucidate the regulation mechanisms of carotenoid biosynthesis in apricot fruit (Prunus armeniaca), carotenoid content and carotenogenic gene expression were analysed as a function of ethylene production in two colour-contrasted apricot varieties. Fruits from Goldrich (GO) were orange, while Moniqui (MO) fruits were white. Biochemical analysis showed that GO accumulated precursors of the uncoloured carotenoids, phytoene and phytofluene, and the coloured carotenoid, beta-carotene, while Moniqui (MO) fruits only accumulated phytoene and phytofluene but no beta-carotene.

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Several genetic linkage maps have been published in recent years on different Prunus species suggesting a high level of resemblance among the genomes of these species. One of these maps (Joobeur et al., Theor Appl Genet 97:1034-1041 [(1998); Aranzana et al.

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The genetic diversity of apricot ( Prunus armeniaca; 2n = 16) was studied using AFLP markers. Forty seven apricot cultivars were selected from the following geographic regions: Europe, North America, North Africa, Turkey, Iran and China. Five EcoRI- MseI AFLP primer combinations revealed 416 legible bands, of which 379 were polymorphic markers.

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Peach GF305 is frequently used as rootstock in experiments to evaluate the resistance of different species of Prunus to Plum pox virus (PPV) because of its extreme susceptibility. However, transmission of PPV in Prunus species is sometimes problematic due to its low concentration or uneven distribution in these species. To determine the most effective way of transmitting the virus, different infection methods (by aphids, grafting, mechanical infection and injection) were tested using Dideron PPV isolates.

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Localization of Plum pox virus (PPV) in stem and petiole tissues of four susceptible and four resistant apricot cultivars has been studied. Consecutive 1-mm spaced transverse sections were taken from the tissues and were printed onto nitrocellulose membrane in duplicate. For virus-specific detection, one series of prints was probed with an antibody to PPV coat and the density of stains was evaluated by light microscopy.

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