Publications by authors named "Assaf Distelfeld"

Article Synopsis
  • Aegilops species, particularly Aegilops longissima and Aegilops speltoides, are closely related to wheat and provide significant genetic diversity for its improvement.
  • Whole-genome analysis of these Aegilops species revealed that Aegilops longissima and Aegilops sharonensis genomes are similar and closely related to wheat's D subgenome, while Aegilops speltoides is more closely tied to the B subgenome.
  • The study identified unique and shared gene variants, particularly in NLR genes, suggesting that Aegilops genomes have valuable traits that could enhance wheat breeding efforts.
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Aegilops tauschii, the wild progenitor of wheat D-genome and a valuable germplasm for wheat improvement, has a wide natural distribution from eastern Turkey to China. However, the phylogenetic relationship and dispersion history of Ae. tauschii in China has not been scientifically clarified.

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Water deficit during the early vegetative growth stages of wheat (Triticum) can limit shoot growth and ultimately impact grain productivity. Introducing diversity in wheat cultivars to enhance the range of phenotypic responses to water limitations during vegetative growth can provide potential avenues for mitigating subsequent yield losses. We tested this hypothesis in an elite durum wheat background by introducing a series of introgressions from a wild emmer (Triticum turgidum ssp.

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and are two tetraploid wheat species sharing as a common ancestor, and domesticated accessions from both of these allopolyploids exhibit nonbrittle rachis (i.e., nonshattering spikes).

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Advances in genomics have expedited the improvement of several agriculturally important crops but similar efforts in wheat (Triticum spp.) have been more challenging. This is largely owing to the size and complexity of the wheat genome, and the lack of genome-assembly data for multiple wheat lines.

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Article Synopsis
  • Stripe rust is a wheat disease caused by a fungal pathogen, and the best defense is planting resistant wheat cultivars, particularly tetraploid varieties that offer genetic diversity.
  • Researchers mapped nine quantitative trait loci (QTL) for stripe rust resistance from a cross between durum wheat cultivars Svevo and Zavitan in China and Israel.
  • One major resistance locus was found on chromosome arm 1BL, while other minor-effect QTL were identified on different chromosomes, which can assist in developing more resistant wheat strains through marker-assisted selection.
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In many non-cultivated angiosperm species, seed dispersal is facilitated by the shattering of the seed head at maturity; in the Triticeae tribe, to which several of the world's most important cereals belong, shattering takes the form of a disarticulation of the rachis. The products of the genes and are both required for disarticulation to occur above the rachis nodes within the genera (barley) and (wheat). Here, it has been shown that both and are specific to the Triticeae tribe, although likely paralogs ( and ) are carried by the family Poaceae including Triticeae (the donor of the bread wheat D genome) lacks a copy of and disarticulation in this species occurs below, rather than above the rachis node; thus, the product of appears to be required for disarticulation to occur above the rachis node.

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Unfortunately, the 9th author name was incorrectly published in the original publication. The complete correct name is given below.

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Su1-Ph1, which we previously introgressed into wheat from Aegilops speltoides, is a potent suppressor of Ph1 and a valuable tool for gene introgression in tetraploid wheat. We previously introgressed Su1-Ph1, a suppressor of the wheat Ph1 gene, from Aegilops speltoides into durum wheat cv Langdon (LDN). Here, we evaluated the utility of the introgressed suppressor for inducing introgression of alien germplasm into durum wheat.

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Wheat domestication was a milestone in the rise of agrarian societies in the Fertile Crescent. As opposed to the freely dispersing seeds of its tetraploid progenitor wild emmer, the hallmark trait of domesticated wheat is intact, harvestable spikes. During domestication, wheat acquired recessive loss-of-function mutations in the Brittle Rachis 1 genes, both in the A genome (BTR1-A) and B genome (BTR1-B).

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α-Gliadins are a major group of gluten proteins in wheat flour that contribute to the end-use properties for food processing and contain major immunogenic epitopes that can cause serious health-related issues including celiac disease (CD). α-Gliadins are also the youngest group of gluten proteins and are encoded by a large gene family. The majority of the gene family members evolved independently in the A, B, and D genomes of different wheat species after their separation from a common ancestral species.

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Wild emmer allele of GNI-A1 ease competition among developing grains through the suppression of floret fertility and increase grain weight in tetraploid wheat. Grain yield is a highly polygenic trait determined by the number of grains per unit area, as well as by grain weight. In wheat, grain number and grain weight are usually negatively correlated.

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The domestication of wild emmer wheat led to the selection of modern durum wheat, grown mainly for pasta production. We describe the 10.45 gigabase (Gb) assembly of the genome of durum wheat cultivar Svevo.

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Article Synopsis
  • Wild emmer is the ancestor of all cultivated tetraploid wheat, with a large genome over 10 Gb and predominantly made up of repeated sequences.
  • The assembly improvement of the wild emmer genome (WEW_v1.0) utilized advanced mapping technologies to refine the genetic structure, reducing the number of scaffolds from 151,912 to 149,252 and improving scaffold organization.
  • The enhanced genome assembly is crucial for studying genetic changes that occurred during the domestication of wheat.
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Article Synopsis
  • - The study focuses on improving grain weight (GW) in wheat through genetic analysis, identifying quantitative trait loci (QTLs) linked to GW in a specific population of recombinant inbred lines (RILs) derived from a cross between wild and durum wheat.
  • - A significant QTL on chromosome 6A was found to enhance GW, validated through a line carrying this QTL, which showed over 8% increase in GW compared to the durum variety it was derived from.
  • - The research identified a wheat gene, TtGRF4-A, as a potential candidate for GW improvement, highlighting its rare alleles in wild wheat accessions that may contribute to higher wheat yields in future breeding efforts.
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Yellow rust, caused by Puccinia striiformis f. sp. tritici (Pst), is a devastating fungal disease threatening much of global wheat production.

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Comparison of genome sequences of wild emmer wheat and Aegilops tauschii suggests a novel scenario of the evolution of rearranged wheat chromosomes 4A, 5A, and 7B. Past research suggested that wheat chromosome 4A was subjected to a reciprocal translocation T(4AL;5AL)1 that occurred in the diploid progenitor of the wheat A subgenome and to three major rearrangements that occurred in polyploid wheat: pericentric inversion Inv(4AS;4AL)1, paracentric inversion Inv(4AL;4AL)1, and reciprocal translocation T(4AL;7BS)1. Gene collinearity along the pseudomolecules of tetraploid wild emmer wheat (Triticum turgidum ssp.

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Homology was searched with genes annotated in the Aegilops tauschii pseudomolecules against genes annotated in the pseudomolecules of tetraploid wild emmer wheat, Brachypodium distachyon, sorghum and rice. Similar searches were performed with genes annotated in the rice pseudomolecules. Matrices of collinear genes and rearrangements in their order were constructed.

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Wild emmer wheat (Triticum turgidum ssp. dicoccoides) is the progenitor of wheat. We performed chromosome-based survey sequencing of the 14 chromosomes, examining repetitive sequences, protein-coding genes, miRNA/target pairs and tRNA genes, as well as syntenic relationships with related grasses.

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NGS-assisted super pooling emerging as powerful tool to accelerate gene mapping and haplotype association analysis within target region uncovering specific linkage SNPs or alleles for marker-assisted gene pyramiding. Conventional gene mapping methods to identify genes associated with important agronomic traits require significant amounts of financial support and time. Here, a single nucleotide polymorphism (SNP)-based mapping approach, RNA-Seq and SNP array assisted super pooling analysis, was used for rapid mining of a candidate genomic region for stripe rust resistance gene Yr26 that has been widely used in wheat breeding programs in China.

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The recalcitrance of secondary plant cell walls to digestion constrains biomass use for the production of sustainable bioproducts and for animal feed. We screened a population of Brachypodium recombinant inbred lines (RILs) for cell wall digestibility using commercial cellulases and detected a quantitative trait locus (QTL) associated with this trait. Examination of the chromosomal region associated with this QTL revealed a candidate gene that encodes a putative glycosyl transferase family (GT) 43 protein, orthologue of IRX14 in Arabidopsis, and hence predicted to be involved in the biosynthesis of xylan.

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Einkorn and emmer wheat together with barley were among the first cereals domesticated by humans more than 10,000 years ago, long before durum or bread wheat originated. Domesticated einkorn wheat differs from its wild progenitor in basic morphological characters such as the grain dispersal system. This study identified the () and () in einkorn as homologous to barley.

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Article Synopsis
  • Meiotic pairing of homoeologous chromosomes in polyploid wheat is hindered by a specific locus on chromosome 5 of the B genome, which impacts genetic interactions.
  • Two main suppressor loci have been identified in the close relative of wheat, leading to successful introgression into different wheat varieties (hexaploid and tetraploid).
  • The study demonstrates that genetic factors from the LDN variety can enhance homoeologous chromosome pairing in wheat, highlighting the importance of specific genes for improving wheat genetics and recombination.
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