Criticality, observed during second-order phase transitions, is an emergent phenomenon. The brain operates near criticality where complex systems exhibit high correlations. As a system approaches criticality, it develops "domain"-like regions with competing phases and increased spatio-temporal correlations that diverge.
View Article and Find Full Text PDFBackground: Observational data during the pandemic have demonstrated mixed associations between frailty and mortality.
Aim: To examine associations between frailty and short-term mortality in patients hospitalised with coronavirus disease 2019 (COVID-19).
Methods: In this systematic review and meta-analysis, we searched PubMed, Embase and the COVID-19 living systematic review from 1 December 2019 to 15 July 2021.
Initial reports of case fatality rates (CFRs) among adults with coronavirus disease (COVID-19) receiving invasive mechanical ventilation (IMV) are highly variable. To examine the CFR of patients with COVID-19 receiving IMV. Two authors independently searched PubMed, Embase, medRxiv, bioRxiv, the COVID-19 living systematic review, and national registry databases.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
October 2019
Understanding chromatin organization and dynamics is important, since they crucially affect DNA functions. In this study, we investigate chromatin dynamics by statistically analyzing single-nucleosome movement in living human cells. Bimodal nature of the mean square displacement distribution of nucleosomes allows for a natural categorization of the nucleosomes as fast and slow.
View Article and Find Full Text PDFAlthough chromatin organization and dynamics play a critical role in gene transcription, how they interplay remains unclear. To approach this issue, we investigated genome-wide chromatin behavior under various transcriptional conditions in living human cells using single-nucleosome imaging. While transcription by RNA polymerase II (RNAPII) is generally thought to need more open and dynamic chromatin, surprisingly, we found that active RNAPII globally constrains chromatin movements.
View Article and Find Full Text PDFIntroduction: Normal menisci of the knee are semilunar structures. Sometimes, a meniscus may be found to be thickened and disc like and is called a discoid meniscus. Such a discoid variant is usually found in the lateral meniscus.
View Article and Find Full Text PDFCell reprogramming is a process of transitions from differentiated to pluripotent cell states via transient intermediate states. Within the epigenetic landscape framework, such a process is regarded as a sequence of transitions among basins on the landscape; therefore, theoretical construction of a model landscape which exhibits experimentally consistent dynamics can provide clues to understanding epigenetic mechanism of reprogramming. We propose a minimal gene-network model of the landscape, in which each gene is regulated by an integrated mechanism of transcription-factor binding/unbinding and the collective chemical modification of histones.
View Article and Find Full Text PDFThe massive fluctuations occurring in Russian alcohol-related mortality since the mid-1980s cannot be seen outside of the context of great social and economic change. There is a dearth of qualitative studies about Russian male drinking and especially needed are those that address social processes and individual changes in drinking. Conducted as part of a longitudinal study on men's alcohol consumption in Izhevsk, this qualitative study uses 25 semi-structured biographical interviews with men aged 33-60 years to explore life course variation in drinking.
View Article and Find Full Text PDFOsseous choristoma is a normal bone tissue in an ectopic position. These are slow growing lesions that are usually completely asymptomatic and only present when there is a disruption in the function of the organ due to its large size as it grows. Definitive diagnosis is obtained only after the histopathological examination.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
February 2015
We study a quasi-one-dimensional system of hard disks confined between hard lines to explore the relationship between the inherent structure landscape, the thermodynamics, and the dynamics of the fluid. The transfer matrix method is used to obtain an exact description of the landscape, equation of state, and provide a mapping of configurations of the equilibrium fluid to their local jammed structures. This allows us to follow how the system samples the landscape as a function of occupied volume fraction ϕ.
View Article and Find Full Text PDFThe shoulder joint is complex in structure and functionality. It is often difficult to assess clinically due to the great variety of associated pathology. This article presents an overview of the anatomy of the shoulder region and associated pathologies, whilst providing a summary of the clinical examination of the shoulder and associated 'special tests'.
View Article and Find Full Text PDFWe provide a comprehensive picture of the jamming phase diagram by connecting the athermal, granular ensemble of jammed states and the equilibrium fluid through the inherent structure paradigm for a system of hard disks confined to a narrow channel. The J line is shown to be divided into packings that are either accessible or inaccessible from the equilibrium fluid. The J point itself is found to occur at the transition between these two sets of packings and is located at the maximum of the inherent structure distribution.
View Article and Find Full Text PDFWe show that a system of hard disks confined to a narrow channel exhibits a fragile-strong fluid crossover located at the maximum of the isobaric heat capacity and that the relaxation times for different channel widths fall onto a single master curve when rescaled by the relaxation times and temperatures of the crossover. Calculations of the configurational entropy and the inherent structure equation of state find that the crossover is related to properties of the jamming landscape for the model but that the Adam-Gibbs relation does not predict the relaxation behavior. We also show that a facilitated dynamics description of the system, where kinetically excited regions are identified with local packing arrangements of the disks, successfully describes the fragile-strong crossover.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
June 2012
Experimental and computational model systems composed of frictionless particles in a fixed geometry have a finite number of distinct mechanically stable (MS) packings. The frequency of occurrence for each MS packing is highly variable and depends strongly on preparation protocol. Despite intense work, it is extremely difficult to predict a priori the MS packing probabilities.
View Article and Find Full Text PDFBackground: The prevalence of diabetes mellitus is increasing among Indian population over time. There are varying reports about the association of depression among type 2 diabetic individuals. However, there is limited data about this in India.
View Article and Find Full Text PDFPhys Rev E Stat Nonlin Soft Matter Phys
March 2011
Formulating a statistical mechanics for granular matter remains a significant challenge, in part due to the difficulty associated with a complete characterization of the systems under study. We present a fully characterized model of a granular material consisting of N two-dimensional, frictionless hard disks, confined between hard walls, including a complete enumeration of all possible jammed structures. We show that the properties of the jammed packings are independent of the distribution of defects within the system and that all the packings are isostatic.
View Article and Find Full Text PDFAn exact description of the complete jamming landscape is developed for a system of hard discs of diameter sigma, confined between two lines separated by a distance 1+sqrt[3/4]
Computer simulations, using the Stillinger-Weber potential, have previously been employed to demonstrate a liquid-liquid transition in supercooled silicon near 1060 K. From calculations of electronic structure using an empirical psuedopotential, we show that silicon undergoes an associated metal to semimetal transition with a resistivity jump of roughly 1 order of magnitude. We show that the electronic states near the Fermi energy become localized in the low temperature phase, and that changes in electronic structure between the two phases arise from a change in atomic structure, and not from a change in density.
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