Publications by authors named "Artur Jurgas"

The problem of artifacts in whole slide image acquisition, prevalent in both clinical workflows and research-oriented settings, necessitates human intervention and re-scanning. Overcoming this challenge requires developing quality control algorithms, that are hindered by the limited availability of relevant annotated data in histopathology. The manual annotation of ground-truth for artifact detection methods is expensive and time-consuming.

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Article Synopsis
  • The alignment of tissue in whole-slide images (WSI) is essential for both research and clinical purposes, and recent advancements in computing and deep learning have changed how these images are analyzed.
  • The ACROBAT challenge was organized to evaluate various WSI registration algorithms using a large dataset of 4,212 WSIs from breast cancer patients, aiming to align tissue stained with different methods.
  • The study found that various WSI registration methods can achieve high accuracy and identified specific clinical factors that affect their performance, helping researchers choose and improve their analysis techniques.
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The acquisition of whole slide images is prone to artifacts that can require human control and re-scanning, both in clinical workflows and in research-oriented settings. Quality control algorithms are a first step to overcome this challenge, as they limit the use of low quality images. Developing quality control systems in histopathology is not straightforward, also due to the limited availability of data related to this topic.

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The analysis of veterinary radiographic imaging data is an essential step in the diagnosis of many thoracic lesions. Given the limited time that physicians can devote to a single patient, it would be valuable to implement an automated system to help clinicians make faster but still accurate diagnoses. Currently, most of such systems are based on supervised deep learning approaches.

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