The fly route of extended-spectrum-β-lactamase-producing dissemination in a cattle farm: from the ecosystem to the molecular scale.

Introduction: This study aimed to understand the origin and to explain the maintenance of extended-spectrum β-lactamase (ESBL) isolated from food-producing animals in a third-generation cephalosporin (3GC)-free farm.

Methods: Culture and molecular approaches were used to test molecules other than 3GC such as antibiotics (tetracycline and oxytetracycline), antiparasitics (ivermectin, flumethrin, fenbendazol, and amitraz), heavy metal [arsenic, HNO, aluminum, HNO, cadmium (CdSO), zinc (ZnCl), copper (CuSO), iron (FeCl), and aluminum (AlSO)], and antioxidant (butylated hydroxytoluene) as sources of selective pressure. Whole-genome sequencing using short read (Illumina™) and long read (Nanopore™) technologies was performed on 34 genomes.

CherryChèvre: A fine-grained dataset for goat detection in natural environments.

We introduce a new dataset for goat detection that contains 6160 annotated images captured under varying environmental conditions. The dataset is intended for developing machine learning algorithms for goat detection, with applications in precision agriculture, animal welfare, behaviour analysis, and animal husbandry. The annotations were performed by expert in computer vision, ensuring high accuracy and consistency.

Impact of Diet Supplementation and Age at Slaughter on Carcass Characteristics of Creole Goats.

The objective of this study was to evaluate the effects of diet and age on finishing performances and carcass characteristics of male Creole goats. A total of 91 weaned male Creole kids [84 days old ± 7 days, 9.2 kg live weight (LW) ± 0.

Mixed Grazing and Dietary Supplementation Improve the Response to Gastrointestinal Nematode Parasitism and Production Performances of Goats.

Small ruminants are very affected by gastrointestinal nematode (GIN) parasitism worldwide. The improvement of the host protective response and the reduction of the probability of contact between hosts and parasites appear as very promising strategies. The objective of this study was to evaluate the effect of a combination of two components of these two strategies on natural GIN infection and production performances of Creole goat kids: dietary supplementation and a rotational mixed grazing system.

Mixed grazing of adult goats and cattle: Lessons from long-term monitoring.

Mixed grazing of breeding goats and cattle (goats to cattle ratio: about 50 %, based on metabolic weight) was monitored for 2 years on a rotational pasture with the two species grazing together, then for 5 years with cattle grazing immediately after goats. For both modalities, the level of goat parasite infection was not significantly different from that of the control groups. Nevertheless, the association allowed a slight improvement in kid growth and goat productivity, probably in relation to a better food quality.

Transcriptome variation in response to gastrointestinal nematode infection in goats.

Gastrointestinal nematodes (GIN) are a major constraint for small ruminant production. Due to the rise of anthelmintic resistance throughout the world, alternative control strategies are needed. The development of GIN resistance breeding programs is a promising strategy.

Effectiveness of several anthelmintics to control a Strongyloides sp. outbreak in Creole-de-Guadeloupe male kids aged 7 months.

Routine faecal examination of a herd of weaned male goats revealed heavy infections with gastrointestinal strongyles (GIS) and Strongyloides sp. Moxidectin (routinely dosed at 0.3 mg·kg, i.

Goats worm burden variability also results from non-homogeneous larval intake.

For small ruminants, Gastrointestinal Nematodes (GINs) are responsible for severe economic losses and they are also an animal welfare problem. GIN use their host to reproduce and disperse eggs on the pasture, from where they can re-infect another animal. The high density of hosts on the pasture and the extreme tolerance of GIN to environmental constraints make GIN eradication almost impossible.

The nutritional status affects the complete blood count of goats experimentally infected with Haemonchus contortus.

Background: Gastrointestinal nematode (GIN) remains the most important pathogenic constraint of small ruminant production worldwide. The improvement of the host immune response against GIN though breeding for improved animal resistance, vaccination and nutritional supplementation appear as very promising methods. The objective of this study was to investigate the effect of four nutritional status differing in protein and energy levels (Hay: 5.

Effect of changes in the nutritional status on the performances of growing Creole kids during an established nematode parasite infection.

In this study, we evaluated the effect of changes in the nutritional status on the performances of growing Creole kids during an established experimental gastrointestinal nematode (GIN) infection. Eighteen 6-month-old Creole kids were distributed in two main groups infected (I) and non-infected (NI) and were placed for a period of 4 weeks on each of three diets differing in their nutritional values: (1) fresh grass (FG, 6.7 MJ/kg dry matter (DM) and 7.

Impact of the post-weaning nutritional history on the response to an experimental Haemonchus contortus infection in Creole goats and Black Belly sheep.

In small ruminants, the response against gastrointestinal nematode (GIN) infections is influenced not only by the host genotype and the physiological stage but also by environmental factors, particularly the nutritional status at the time of infection. In this study we evaluated the long-term effect and the interaction between the host species and the nutritional history on the response to GIN infection in two animal models differing in their phenotypic growth and their level of GIN resistance: Black Belly sheep and Creole goats. Lambs and kids were subjected to three distinct nutritional conditions at weaning: low dietary conditions (100% of the theoretical energy requirement for maintenance, corresponding to 548v.

Feasibility of a "leader-follower" grazing system instead of specialised paddocks with regard to integrated gastrointestinal control in small ruminant farming.

In the humid tropics, small ruminant farmers have to deal with gastrointestinal parasitic nematodes (GIN), among which anthelmintic resistant (AR) populations are rapidly spreading. Although targeted selective treatments (TSTs) are being increasingly used in breeding stock, suppressive drenchings remain the rule in younger animals, for safety and ease of implementation. Until now, the weaned animals are grazed on dedicated plots, making the selection and spread of AR parasites inevitable.

Impact of the post-weaning parasitism history on an experimental Haemonchus contortus infection in Creole goat kids.

Gastrointestinal nematode (GIN) infections have an important negative impact on small ruminant production. The selection of genotypes resistant to these parasitic infections is a promising alternative control strategy. Thus, resistance against GIN is an important component of small ruminant breeding schemes, based on phenotypic measurements of resistance in immune mature infected animals.

Economic values of body weight, reproduction and parasite resistance traits for a Creole goat breeding goal.

A specific breeding goal definition was developed for Creole goats in Guadeloupe. This local breed is used for meat production. To ensure a balanced selection outcome, the breeding objective included two production traits, live weight (BW11) and dressing percentage (DP) at 11 months (the mating or selling age), one reproduction trait, fertility (FER), and two traits to assess animal response to parasite infection: packed cell volume (PCV), a resilience trait, and faecal worm eggs count (FEC), a resistance trait.

Detection of quantitative trait loci for resistance to gastrointestinal nematode infections in Creole goats.

This study aimed to identify regions of the genome affecting resistance to gastrointestinal nematodes in a Creole goat population naturally exposed to a mixed nematode infection (Haemonchus contortus, Trichostrongylus colubriformis and Oesophagostomum columbianum) by grazing on irrigated pasture. A genome-wide quantitative trait loci (QTL) scan was performed on 383 offspring from 12 half-sib families. A total of 101 microsatellite markers were genotyped.

Genetic analysis of the potential role of IgA and IgE responses against Haemonchus contortus in parasite resistance of Creole goats.

Small ruminants are affected by gastrointestinal nematode (GIN) infection. A promising alternative strategy for control of GIN infection is to increase the level of resistance in the population by taking advantage of the host's immune response. Immunoglobulin A (IgA) and E (IgE) are known to be involved in immune response to GIN.

Genetic parameters for body weight, reproduction, and parasite resistance traits in the Creole goat.

We estimated the genetic parameters for BW, reproduction, and parasite resistance traits to implement a breeding program for the Creole goat. The traits were preweaning BW at 70 d of age (BW70d), BW at 11 mo of age (BW11), fecal egg count at 11 mo of age (FEC11) for all animals, packed cell volumes of lactating does (PCV), and their fertility (FER) and litter size (LS). We analyzed about 30 yr of data, which included 18,450 records on 11,970 animals from the INRA experimental flock in Guadeloupe (French West Indies).

Effect of dietary supplementation on resistance to experimental infection with Haemonchus contortus in Creole kids.

The aim of the present study was to test the effect of dietary supplementation on resistance to experimental infection with Haemonchus contortus in Creole kids. One trial with three replicates involved a total of 154 female kids that were chosen from three successive cohorts of the Creole flock of INRA-Gardel in 2007. The kids were placed into four treatments according to the amount of concentrate they received: G0 (no concentrate and a quality Dichantium spp.

Production systems of Creole goat and their implications for a breeding programme.

The Creole goat is a local meat breed well adapted to the tropical environment of Guadeloupe, a French island in the Caribbean. A survey of 47 goat farmers was conducted in May 2008 to describe the Guadeloupean goat farming systems. It was the preliminary step for the implementation of a breeding programme for Creole goats.

Carcass conformation and cut composition of Creole goat from Guadeloupe.

Carcass data base of 164 Creole male goats was used in order to provide factual data on the carcass conformation. Standardised procedures of carcass measuring and cutting were followed. The European official grid of light lamb is implemented for meat goat in the French West Indies and included five levels.

Intake and digestibility of naive kids differing in genetic resistance and experimentally parasitized (indoors) with Haemonchus contortus in two successive challenges.

We evaluated the effects of infection with Haemonchus contortus on feed intake, digestibility, fecal egg count, circulating eosinophils, and packed cell volume in Creole kids differing in genetic resistance (susceptible, S; resistant, R) to gastrointestinal parasitism and maintained on a similar level of nutrition. The experiment was carried out during 2 periods of 6 wk each differing in immunity development stage. In the first period (acquisition of immunity; period I), 22 naïve male kids (23.

Serum antibody responses in Creole kids experimentally infected with Haemonchus contortus.

The objective of this study was to evaluate the relationship of parasite-specific serum antibodies with the resistance status of Creole kids. The average breeding values on egg output predicted in a context of natural infection at 11 months of age were distant of 1.07 genetic standard deviation between resistant and susceptible animals.

Evaluation of targeted drenching using Famacha method in Creole goat: reduction of anthelmintic use, and effects on kid production and pasture contamination.

Haemonchus infection was monitored for 2 years (six kidding periods) in a Creole goat flock grazing under oceanic-tropical climate. Two hundred and thirty individual does were involved from late pregnancy to weaning. Anaemia diagnoses using Famacha method and packed cell volume (PCV) were compared.

Impact on productivity of peri-parturient rise in fecal egg counts in Creole goats in the humid tropics.

The control of gastrointestinal nematodes requires an understanding of their epidemiology so that particular parasite stages can be targeted. Dam infection during early lactation is one example of this in ruminant nematode infections. The existence of the peri-parturient relaxation in immunity and its impact on productivity were examined in a Creole goat flock from Guadeloupe, exposed to mixed natural infection (predominantly Haemonchus contortus and Trichostrongylus colubriformis).

Preweaning productivity of suckling goats and sheep in Guadeloupe (FWI) under intensive reproductive rate and grazing management.

In Guadeloupe, small ruminants are reared for meat production under pasture conditions. Intensive rotative grazing systems (irrigated, fertilized and high-stocked tropical pastures) allow satisfactory levels of production but generate high post-grazing residues. Experiments were designed to control these.