Publications by authors named "Anne Chen"

Study Objectives: In older adults, self-reported sleep measures may be inaccurate, but polysomnography (PSG) is burdensome. We assessed the performance of an electroencephalography-measuring headband (HB) or actigraphy (ACT) compared with PSG in older adults with sleep disturbances.

Methods: Sixty-three adults aged ≥60 years who reported symptoms of insomnia and/or daytime sleepiness ≥once/week completed a week-long, home-based protocol during which they wore the HB for seven nights, an actigraph for seven days and nights, and completed a one-night level II unattended PSG.

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Objectives: We sought to investigate the diagnostic value of lymphocyte enhancer factor 1 (LEF1) expression in aggressive B-cell lymphomas (BCL) with MYC gene rearrangement (MYC-R).

Methods: Sixty-seven cases of BCL were studied and included Burkitt lymphoma (BL) (23 cases); diffuse large B-cell lymphoma (DLBCL), not otherwise specified (NOS) with MYC-R (13 cases); and DLBCL/high-grade B-cell lymphoma with MYC, BCL2, and/or BCL6 rearrangements (double-hit [DH] or triple-hit [TH], 17 cases). Random DLBCL-NOS (14 cases) without MYC-R was recruited as a control group.

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In the World Health Organization (WHO) 5th edition, prognosis of gastrointestinal (GI) well-differentiated neuroendocrine tumors (WDNET) depends on proliferation rate, commonly assessed by ki-67 immunohistochemical stain. In daily practice, the gold standard for WHO grade assessment by ki-67 staining, printing a photo of a tumor hotspot, counting the number of ki-67-positive cells out of 500 tumor cells, and calculating a percentage, is time-consuming and many cases are eyeballed. This study investigates the utility of a common tool, the manual cell counter used in hematology smear cell counting, for GI WDNET ki-67 counting.

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Purpose: Angiogenesis is a critical component of neoplastic progression, and inflammatory cells within the tumor microenvironment contribute to neoangiogenesis. Prostate-specific membrane antigen (PSMA) is expressed in the neovasculature of various solid tumors, including hepatocellular carcinoma (HCC). Also, CXCR2 + inflammatory cells, including CD15 + neutrophils, play crucial roles in HCC progression.

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T-cell acute lymphoblastic leukemia/lymphoma (T-ALL) is characterized by the combination of T-cell lineage and the presence of immaturity marker(s). Sometimes, the most common immaturity markers for initial flow cytometry screening in T-ALL may be negative, which can be a diagnostic pitfall. When a lack of common first-line immaturity markers is encountered in combination with gamma/delta T-cell receptor expression, a misdiagnosis of mature gamma-delta T-cell leukemia/lymphoma could be rendered.

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While eosinophilic esophagitis (EOE) is defined by histologic presence of eosinophils, a few studies have established the presence of mast cells in EOE and even shown their correlation with symptom persistence despite resolution of eosinophils. Expression of aberrant mast cell markers CD25 and CD2 have not been studied in EOE. This study quantifies the number of hotspot cells per high power field expressing CKIT/CD117, tryptase, CD25, CD2 and CD3 by immunohistochemical stains in endoscopic esophageal biopsies of the following three cohorts: (1) established and histologically confirmed EOE, (2) suspected EOE with biopsies negative for eosinophils, and (3) no history of or suspicion for EOE with histologically unremarkable biopsies.

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Aging is associated with nonresolving inflammation and tissue dysfunction. Resolvin D2 (RvD2) is a proresolving ligand that acts through the G-protein-coupled receptor called GPR18. Unbiased RNA sequencing revealed increased Gpr18 expression in macrophages from old mice, and in livers from elderly humans, which was associated with increased steatosis and fibrosis in middle-aged (MA) and old mice.

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Article Synopsis
  • * A 48-year-old HIV-positive male was seen in the clinic for tonsillar problems and facial pain, combined with recent weight loss and unusual neck imaging results.
  • * Diagnostic procedures, including tonsillar biopsy and subsequent open biopsy, confirmed that the patient's condition was due to secondary syphilis, despite initial findings suggesting a different issue.
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Information on vaccination rates and factors associated with adherence in persons with HIV (PWH) is limited. We report vaccine adherence in 653 adult PWH attending an urban Infectious Disease Clinic from January 2015 to December 2021. Vaccines evaluated included influenza, pneumococcal, tetanus, hepatitis A virus (HAV) and hepatitis B virus (HBV), human papillomavirus (HPV), and zoster vaccines.

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  • Patients with rectal cancer require more repeat biopsies than those with nonrectal colon cancer due to management implications, particularly when undergoing neoadjuvant therapy.
  • The study found that while diagnostic yield was similar for both types of cancer, repeat biopsies were more frequent in rectal cases, largely influenced by the presence of desmoplasia and other specific histopathological features.
  • Factors such as sample size and T stage did not significantly affect diagnostic results, suggesting the need for a strategic, multidisciplinary approach to minimize unnecessary repeat biopsies for rectal tumors.
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Colorectal cancer is the third leading cause of cancer-related death, and its incidence is rising in the younger patient population. In the past decade, research has unveiled several processes (underlying tumorigenesis, many of which involve interactions between tumor cells and the surrounding tissue or tumor microenvironment (TME). Interactions between components of the TME are mediated at a sub-microscopic level.

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Background: There have been few reports regarding the frequency and types of preanalytical errors in stat laboratories, in particular those occurring in the satellite laboratory setting. The impact of this error type on laboratory performance in this environment is largely unknown. We assessed the performance of a stat laboratory serving a population of predominantly elderly patients with suspected or established diagnoses of cancer using Six Sigma methodology and compared the results to previous work on this subject.

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  • The study analyzed clinical variables related to COVID-19 mortality over time, focusing on patients from Stony Brook University Hospital and Tongji Hospital to develop a predictive model.
  • Significant predictors of mortality identified included lactate dehydrogenase, lymphocytes, procalcitonin, D-dimer, C-reactive protein, respiratory rate, and white blood cells, showing high predictive accuracy within days of patient outcomes.
  • The research concluded that fluctuations in these clinical markers were notably greater in patients who did not survive, suggesting that more vigilant monitoring might improve patient outcomes.
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This study aimed to develop a machine learning algorithm to identify key clinical measures to triage patients more effectively to general admission versus intensive care unit (ICU) admission and to predict mortality in COVID-19 pandemic. This retrospective study consisted of 1874 persons-under-investigation for COVID-19 between February 7, 2020, and May 27, 2020 at Stony Brook University Hospital, New York. Two primary outcomes were ICU admission and mortality compared to COVID-19 positive patients in general hospital admission.

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Introduction: Liver cancer-secreted serine protease inhibitor Kazal (LC-SPIK) is a protein that is specifically elevated in cases of hepatocellular carcinoma (HCC). We assessed the performance of LC-SPIK in detecting HCC, including its early stages, in patients with cirrhosis, hepatitis B virus (HBV), and hepatitis C virus (HCV).

Methods: We enrolled 488 patients, including 164 HCC patients (81 early HCC) and 324 controls in a blinded, prospective, case-control study.

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  • The study focused on creating an AI tool to improve the diagnosis of COVID-19 lung infections by analyzing portable chest X-rays (CXRs), which have been challenging for radiologists during the pandemic due to their large volume and poor image quality.
  • Researchers used public datasets containing images of various lung conditions, applying deep-learning algorithms to classify COVID-19 versus other types of pneumonia and normal lungs.
  • The AI tool demonstrated high accuracy, achieving 100% accuracy in distinguishing COVID-19 from normal lungs, and also showed strong performance when comparing COVID-19 against bacterial and non-COVID-19 viral pneumonia, suggesting that deep-learning methods can enhance diagnostic accuracy for portable CXRs.
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This study aimed to develop risk scores based on clinical characteristics at presentation to predict intensive care unit (ICU) admission and mortality in COVID-19 patients. 641 hospitalized patients with laboratory-confirmed COVID-19 were selected from 4997 persons under investigation. We performed a retrospective review of medical records of demographics, comorbidities and laboratory tests at the initial presentation.

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The surge of coronavirus disease 2019 (COVID-19) hospitalizations at our 877-bed quaternary care hospital in Detroit led to an emergent demand for Infectious Diseases (ID) consultations. The traditional 1-on-1 consultation model was untenable. Therefore, we rapidly restructured our ID division to provide effective consultative services.

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Article Synopsis
  • - The text discusses the challenges educators face when trying to help struggling learners, specifically in the context of infectious diseases fellowship programs.
  • - At the 2018 National Fellowship Program Directors' Meeting, discussions centered on how to effectively support and remediate fellows who are having difficulties, covering topics like feedback, performance management, and well-being.
  • - The manuscript compiles these discussions into a competency-based framework aimed at providing guidance for program directors and educators in tackling common remediation issues.
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First reported in 1988, is a virulent coagulase-negative species often associated with endocarditis. This is the first case report describing this infection in the cervical spine. A 58-year-old, left-handed Caucasian woman with no significant medical history presented with neck and left arm pain.

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  • A 71-year-old man with a history of polycythaemia vera presented to the ER with shortness of breath and was found to have a large pericardial effusion, indicating potential pericardial tamponade.
  • He underwent an emergency thoracotomy and pericardial window, which relieved his symptoms.
  • Histological tests showed trilineage hematopoietic elements and JAK2 V617F mutation, linking the findings to extramedullary hematopoiesis in myeloproliferative neoplasms.*
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  • Genome-wide studies have identified 11 regions linked to the risk of high-grade serous epithelial ovarian cancer (HGSOC), and eQTL analyses help pinpoint candidate genes at these regions.
  • Three significant cis-eQTL associations were found at genes CDC42, CDCA8, and HOXD9, with functional evaluations conducted in HGSOC precursor cells.
  • Overexpressing HOXD9 boosted cancer cell growth and revealed a genetic interaction that may indicate its causal role in HGSOC, highlighting its potential influence on genetic susceptibility to the disease.
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The rough coat (rc) spontaneous mutation causes sebaceous gland (SG) hypertrophy, hair loss, and extracutaneous abnormalities including growth retardation. The rc mice have a missense mutation in the predicted Ig protein Myelin Protein Zero-Like 3 (Mpzl3). In this study, we generated Mpzl3 knockout mice to determine its functions in the skin.

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Background: To properly assess the progression and treatment response of alopecia, one must measure the changes in hair mass, which is influenced by both the density and diameter of hair. Unfortunately, a convenient device for hair mass evaluation had not been available to dermatologists until the recent introduction of the cross-section trichometer, which directly measures the cross-sectional area of an isolated bundle of hair.

Objective: We sought to evaluate the accuracy and sensitivity of the HairCheck(®) device, a commercial product derived from the original cross-section trichometer.

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