Publications by authors named "Anna Johansson"

Livestock farming has a key role in many rural communities both economically and culturally. It plays an important role in overcoming the deficiencies of meat, milk, wool and various by-products. Pakistan has a large number of livestock, well-adapted to local conditions.

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  • * Recent advancements include better genome assemblies and the identification of genes linked to traits like meat quality, milk production, and disease resistance, enhancing our understanding of domestication and trait genetics.
  • * The emergence of new genomic tools, like graphical pangenomics, promises to revolutionize research, promoting more effective molecular breeding and accurate prediction models for improving livestock genetics.
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Unlabelled: Underutilized sheep and goat breeds can adapt to challenging environments due to their genetics. Integrating publicly available genomic datasets with new data will facilitate genetic diversity analyses; however, this process is complicated by data discrepancies, such as outdated assembly versions or different data formats. Here, we present the SMARTER-database, a collection of tools and scripts to standardize genomic data and metadata, mainly from SNP chip arrays on global small ruminant populations, with a focus on reproducibility.

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Background: While immediate breast reconstruction rates in breast cancer are increasing, they remain low in women over 65 years old. The aim was to investigate surgical outcomes in women older than 65 years receiving implant-based immediate breast reconstruction.

Method: The population-based Stockholm Breast Reconstruction Database includes all adult women with breast cancer receiving an implant-based immediate breast reconstruction in Stockholm, Sweden, 2005-2015.

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  • - Neuroblastoma (NB) is a serious and complex childhood cancer that can vary widely in its progression; while some tumors may shrink on their own or respond to treatment, about 40% of patients face severe outcomes, especially those in the high-risk category.
  • - Researchers used advanced techniques, like single-cell multi-omics and sequencing, to study human NB and discovered not only adrenergic tumor cells but also unique, aneuploid SCP-like cells that exhibit clonal expansion and specific gene expression patterns.
  • - The study suggests that aneuploid SCP-like cells are a new aspect of NB, indicating that these cells, which may arise from the neural crest lineage, could play a key role in the early
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Background: The concept of an occupational pattern in occupational therapy and occupational science has evolved with varying definitions, ranging from activity patterns to patterns of daily occupation.

Aims: This study aimed to explore the concept of occupational pattern, develop an updated definition of the concept, and theoretically validate the concept's definition.

Method: Walker and Avant's concept analysis method was used, where both theoretical frameworks and peer-reviewed scientific literature were searched and synthesized to clarify and define the concept.

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  • * Data was collected from 302 ICU admissions, examining 10 different drugs, with daily dosages recorded and blood samples taken twice a day for measurement.
  • * Results revealed that while drug dosages were within recommended ranges, there was significant variation in blood concentrations, yet 97% remained below the upper therapeutic limit, indicating effective monitoring practices.
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Aim: Radiotherapy is associated with cell depletion and loss of blood supply, which are linked to compromised bone healing. However, the molecular events underlying these effects at the tissue-implant interface have not been fully elucidated. This study aimed to determine the major molecular mediators associated with compromised osseointegration due to previous exposure to radiation.

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  • The study aimed to assess if improvements in lung cancer survival from 1990 to 2016 were consistent across different age groups and cancer types in Nordic countries.
  • Data from Denmark, Finland, Iceland, Norway, and Sweden was analyzed, showing continuous improvements in both 1- and 5-year relative survival rates for lung cancer across all demographics and subtypes, with Denmark seeing the most significant improvements.
  • Despite these advancements, lung cancer survival rates are still low, with around 75% of patients dying within five years of diagnosis.
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Sheep are among the earliest domesticated livestock species, with a wide variety of breeds present today. However, it remains unclear how far back this diversity goes, with formal documentation only dating back a few centuries. North European short-tailed (NEST) breeds are often assumed to be among the oldest domestic sheep populations, even thought to represent relicts of the earliest sheep expansions during the Neolithic period reaching Scandinavia <6,000 years ago.

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Study Question: What are the obstetric and perinatal outcomes in births to breast cancer survivors compared to women without previous breast cancer?

Summary Answer: Women who conceived during the first 2 years following a breast cancer diagnosis had a higher risk for preterm birth, induced delivery, and cesarean section, while no increased risks were observed in births conceived later than 2 years after a breast cancer diagnosis.

What Is Known Already: A recent meta-analysis found higher risks of cesarean section, preterm birth, low birthweight, and small for gestational age in pregnancies among breast cancer survivors. Less is known about rarer outcomes such as pre-eclampsia or congenital malformations.

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  • - The study investigates the characteristics, treatment patterns, and survival rates of ER-low (1-9%) and ER-zero (0%) HER2-negative breast cancer patients in Sweden, treating ER-low cases as triple-negative breast cancer (TNBC) due to the local threshold differences in ER positivity.
  • - Out of 5,655 analyzed tumors, 90.1% were ER-zero, with ER-low tumors showing some similarities in tumor grade and Ki67 levels, but no significant differences in chemotherapy received or pathologic complete response rates between ER categories.
  • - Although ER-low patients had a slightly better overall survival compared to ER-zero patients, this difference wasn't statistically significant, suggesting that the two may not differ much in terms of
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Background And Purpose: Stage at cancer diagnosis is an important predictor of cancer survival. TNM stage is constructed for anatomic solid cancer diagnoses from tumor size (T), nodal spread (N) and distant metastasis (M) and categorized in groups 0-I, II, II and IV. TNM stage is imperative in cancer diagnosis, management and control, and of high value in cancer surveillance, for example, monitoring of stage distributions.

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Background: Since the early 2000s, overall and site-specific cancer survival have improved substantially in the Nordic countries. We evaluated whether the improvements have been similar across countries, major cancer types, and age groups.

Material And Methods: Using population-based data from the five Nordic cancer registries recorded in the NORDCAN database, we included a cohort of 1,525,854 men and 1,378,470 women diagnosed with cancer (except non-melanoma skin cancer) during 2002-2021, and followed for death until 2021.

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  • A study of over 70,000 men diagnosed with intermediate- or high-risk nonmetastatic prostate cancer in Sweden examined treatment patterns and cancer-specific mortality from 2008 to 2020.
  • The results showed a significant increase in curative treatment among older age groups, especially those aged 70-84, although older men were still less likely to receive staging procedures and curative treatment.
  • The findings suggest a reduction in age-related bias in treatment, indicating a trend towards more individualized decision-making and adherence to guidelines promoting active management for older men with prostate cancer.
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  • - Myeloproliferative neoplasms (MPN) negatively impact pregnancy outcomes, leading to lower childbirth rates compared to matched controls, particularly in conditions like polycythemia vera (PV) and primary myelofibrosis (PMF).
  • - The study analyzed reproductive patterns in women with MPN aged 15-44, finding a significant reduction in childbirth rates (HR 0.78), while those with essential thrombocythemia did not show a reduced rate (HR 1.02).
  • - Although the overall miscarriage risk was not significantly higher before MPN diagnosis, there was an increased risk observed during follow-up (HR 1.25), and women with MPN reported having fewer children
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Background: The survival in patients diagnosed with cutaneous malignant melanoma (CMM) has improved in the Nordic countries in the last decades. It is of interest to know if these improvements are observed in all ages and for both women and men.

Methods: Patients diagnosed with CMM in the Nordic countries in 1990-2016 were identified in the NORDCAN database.

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  • Researchers conducted whole genome sequencing on 66 cases of CNS toxicity induced by antimicrobial drugs and 833 controls to explore genetic predispositions.
  • The study primarily examined the role of seventeen efflux transporters at the blood-brain barrier and found no significant association, but identified uncommon genetic variants linked to CNS toxicity.
  • Three specific genes—LCP1, RETSAT, and SFMBT2—were associated with the toxicity, particularly variants in LCP1 that showed strong statistical significance.
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Background: Consumption of processed red meat has been associated with increased risk of developing type 2 diabetes (T2D), but challenges in dietary assessment call for objective intake biomarkers.

Objectives: This study aimed to investigate metabolite biomarkers of meat intake and their associations with T2D risk.

Methods: Fasting plasma samples were collected from a case-control study nested within Västerbotten Intervention Program (VIP) (214 females and 189 males) who developed T2D after a median follow-up of 7 years.

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Objective: To use machine learning methods to develop prediction models of pregnancy complications in women who conceived with assisted reproductive techniques (ART).

Design: A nation-wide register-based cohort study with prospectively collected data.

Setting: Swedish national registers and nationwide quality IVF register.

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Several indigenous cattle breeds in Sweden are endangered. Conservation of their genetic diversity and genomic characterization is a priority.Whole-genome sequences (WGS) with a mean coverage of 25X, ranging from 14 to 41X were obtained for 30 individuals of the breeds Fjällko, Fjällnära, Bohuskulla, Rödkulla, Ringamåla, and Väneko.

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In the last decade, several studies aimed at dissecting the genetic architecture of local small ruminant breeds to discover which variations are involved in the process of adaptation to environmental conditions, a topic that has acquired priority due to climate change. Considering that traditional breeds are a reservoir of such important genetic variation, improving the current knowledge about their genetic diversity and origin is the first step forward in designing sound conservation guidelines. The genetic composition of North-Western European archetypical goat breeds is still poorly exploited.

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Introduction: The incidence of cancer during pregnancy and within first year post-delivery, ie pregnancy-associated cancer (PAC), is increasing in many countries, but little is known about risk factors for these trends. This study quantified incidence of PAC by trimesters and post-delivery periods, and assessed the role of maternal age, parity, immigrant status, education, smoking and body mass index for the risk and incidence trends of PAC.

Material And Methods: We used data from the national birth and cancer registers in Sweden during 1973-2017 to define a register-based cohort of women aged 15-44 years.

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Native breeds in any country are a national capital, and their preservation is of great importance. Native Cattle of Guilan (NCG) is one of the few pure native breeds in Iran and the West Asia region. During the last decade, NCG population has decreased by more than 40%.

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  • A study examined the risks of cancer patients testing positive for SARS-CoV-2 and experiencing severe COVID-19 compared to the general population in Norway, Denmark, and Iceland from March to December 2020.
  • Cancer patients in Norway and Denmark faced a higher risk of testing positive and having severe COVID-19 outcomes, especially those recently treated or diagnosed with specific cancers, like haematologic malignancies, colorectal, or lung cancer.
  • In contrast, Icelandic cancer patients did not show an increased risk for testing positive, but overall, the increased risks for severe outcomes persisted for cancer patients throughout 2020.
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