NON-CARTESIAN SELF-SUPERVISED PHYSICS-DRIVEN DEEP LEARNING RECONSTRUCTION FOR HIGHLY-ACCELERATED MULTI-ECHO SPIRAL FMRI.

Functional MRI (fMRI) is an important tool for non-invasive studies of brain function. Over the past decade, multi-echo fMRI methods that sample multiple echo times has become popular with potential to improve quantification. While these acquisitions are typically performed with Cartesian trajectories, non-Cartesian trajectories, in particular spiral acquisitions, hold promise for denser sampling of echo times.

Effect of Intermittent vs. Continuous Energy Restriction on Visceral Fat: Protocol for The Healthy Diet and Lifestyle Study 2 (HDLS2).

Obesity in the United States and Western countries represents a major health challenge associated with an increased risk of metabolic diseases, including cardiovascular disease, hypertension, diabetes, and certain cancers. Our past work revealed a more pronounced obesity-cancer link in certain ethnic groups, motivating us to develop a tailored dietary intervention called the Healthy Diet and Lifestyle 2 (HDLS2). The study protocol is described herein for this randomized six-month trial examining the effects of intermittent energy restriction (5:2 Diet) plus the Mediterranean dietary pattern (IER + MED) on visceral adipose tissue (VAT), liver fat, and metabolic biomarkers, compared to a standard MED with daily energy restriction (DER + MED), in a diverse participant group.

Case-based radiological anatomy instruction using cadaveric MRI imaging and delivered with extended reality web technology.

Purpose: Extended reality (XR) technology enhances learning in medical education. The purpose of this study was to develop and apply a case-based approach for teaching radiological anatomy utilizing XR technology for improved student exploration and engagement.

Methods: The workflow consisted of MRI scanning cadavers followed by radiological, pathological, and anatomical assessment, and finally case presentation based on XR visualizations and student interaction.

Three dimensional radial echo planar imaging for functional MRI.

Purpose: To demonstrate a novel 3D radial echo planar imaging (3D REPI) sequence for flexible, rapid, and motion-robust sampling in fMRI.

Methods: The 3D REPI method expands on the recently described golden angle rotated EPI trajectory using radial batched internal navigator echoes (TURBINE) approach by exploiting the unused perpendicular direction in the EPI readout to form fast analogues of rotated stack of stars or spirals trajectories that cover all 3 dimensions of k-space. An iterative conjugate gradient algorithm with SENSE reconstruction and time-segmented non-uniform fast Fourier transform (FFT) was used for parallel imaging acceleration and to account for the effects of B inhomogeneity.

Radiofrequency phase encoded half-pulses in simultaneous multislice ultrashort echo time imaging.

Purpose: To describe a simultaneous multislice (SMS) ultrashort echo time (UTE) imaging method using radiofrequency phase encoded half-pulses in combination with power independent of number of slices (PINS) inversion recovery (IR) pulses to generate multiple-slice images with short T * contrasts in less than 3 min with close to an eightfold acceleration compared with a standard 2D approach.

Theory And Methods: Radiofrequency phase encoding is applied in an SMS (N = 4) excitation scheme using "sinc" half-pulses. With the use of coil sensitivity encoding (SENSE) and controlled aliasing in parallel imaging (CAIPI) in combination with a gradient echo 2D spiral readout trajectory and IR PINS pulses for contrast enhancement a fast UTE sequence is developed.

A circular echo planar sequence for fast volumetric fMRI.

Purpose: To demonstrate a circular EPI (CEPI) sequence as well as a generalized EPI reconstruction for fast fMRI with parallel imaging acceleration.

Methods: The CEPI acquisition was constructed using variable readout lengths and maximum ramp sampling as well as blipped-CAIPI z-gradient encoding for simultaneous multislice (SMS) and 3D volumetric imaging. A signal equation model with constant and linear phase terms was used to iteratively reconstruct images with low ghosting.

Improving temporal resolution in fMRI using a 3D spiral acquisition and low rank plus sparse (L+S) reconstruction.

Rapid whole-brain dynamic Magnetic Resonance Imaging (MRI) is of particular interest in Blood Oxygen Level Dependent (BOLD) functional MRI (fMRI). Faster acquisitions with higher temporal sampling of the BOLD time-course provide several advantages including increased sensitivity in detecting functional activation, the possibility of filtering out physiological noise for improving temporal SNR, and freezing out head motion. Generally, faster acquisitions require undersampling of the data which results in aliasing artifacts in the object domain.

Respiratory motion prediction and prospective correction for free-breathing arterial spin-labeled perfusion MRI of the kidneys.

Purpose: Respiratory motion prediction using an artificial neural network (ANN) was integrated with pseudocontinuous arterial spin labeling (pCASL) MRI to allow free-breathing perfusion measurements in the kidney. In this study, we evaluated the performance of the ANN to accurately predict the location of the kidneys during image acquisition.

Methods: A pencil-beam navigator was integrated with a pCASL sequence to measure lung/diaphragm motion during ANN training and the pCASL transit delay.

Segmented simultaneous multi-slice diffusion weighted imaging with generalized trajectories.

Purpose: The purpose of this work is to develop and evaluate a single framework for the use of Cartesian and non-Cartesian segmented trajectories for rapid and robust simultaneous multislice (SMS) diffusion weighted imaging (DWI) at 3 Telsa (T).

Methods: A generalized SMS approach with intrinsic phase navigation using Multiplexed Sensitivity Encoding (MUSE) was developed. Segmented blipped-controlled aliasing in parallel imaging echo planar imaging (EPI) and z-gradient modulated spiral trajectories were examined using SMS DWI scans at 3T with a 32-channel head coil.

Improvement of glucaric acid production in via dynamic control of metabolic fluxes.

D-glucaric acid can be used as a building block for biopolymers as well as in the formulation of detergents and corrosion inhibitors. A biosynthetic route for production in has been developed (Moon et al., 2009), but previous work with the glucaric acid pathway has indicated that competition with endogenous metabolism may limit carbon flux into the pathway.

Robust time-shifted spoke pulse design in the presence of large B0 variations with simultaneous reduction of through-plane dephasing, B1+ effects, and the specific absorption rate using parallel transmission.

Purpose: To design parallel transmission spokes pulses with time-shifted profiles for joint mitigation of intensity variations due to B1+ effects, signal loss due to through-plane dephasing, and the specific absorption rate (SAR) at 7T.

Methods: We derived a slice-averaged small tip angle (SA-STA) approximation of the magnetization signal at echo time that depends on the B1+ transmit profiles, the through-slice B0 gradient and the amplitude and time-shifts of the spoke waveforms. We minimize a magnitude least-squares objective based on this signal equation using a fast interior-point approach with analytical expressions of the Jacobian and Hessian.

Rotated stack-of-spirals partial acquisition for rapid volumetric parallel MRI.

Purpose: We present a volumetric sampling method that rotates the spiral interleaves of a stack of spirals (SOSP) trajectory for reduced aliasing artifacts using parallel imaging with undersampling.

Methods: The aliasing pattern in an undersampled SOSP acquisition was modified by consecutively rotating spiral interleaves in each phase-encoding plane. This allows a sampling scheme with a high reduction factor when using a volumetric multireceiver array.

Low peak power multiband spokes pulses for B1 (+) inhomogeneity-compensated simultaneous multislice excitation in high field MRI.

Purpose: To design low peak and integrated power simultaneous multislice excitation radiofrequency pulses with transmit field inhomogeneity compensation in high field MRI.

Theory And Methods: The "interleaved greedy and local optimization" algorithm for small-tip-angle spokes pulses is extended to design multiband (MB) spokes pulses that simultaneously excite multiple slices, with independent spokes weight optimization for each slice. The peak power of the pulses is controlled using a slice phase optimization technique.

Design of parallel transmission pulses for simultaneous multislice with explicit control for peak power and local specific absorption rate.

Purpose: To design parallel transmit (pTx) simultaneous multislice (SMS) spokes pulses with explicit control for peak power and local and global specific absorption rate (SAR).

Methods: We design SMS pTx least-squares and magnitude least squares spokes pulses while constraining local SAR using the virtual observation points (VOPs) compression of SAR matrices. We evaluate our approach in simulations of a head (7T) and a body (3T) coil with eight channels arranged in two z-rows.

Simultaneous Multi-Slice fMRI using spiral trajectories.

Parallel imaging methods using multi-coil receiver arrays have been shown to be effective for increasing MRI acquisition speed. However parallel imaging methods for fMRI with 2D sequences show only limited improvements in temporal resolution because of the long echo times needed for BOLD contrast. Recently, Simultaneous Multi-Slice (SMS) imaging techniques have been shown to increase fMRI temporal resolution by factors of four and higher.

Simultaneous multislice spectral-spatial excitations for reduced signal loss susceptibility artifact in BOLD functional MRI.

Purpose: Simultaneous multislice (SMS) imaging can significantly increase image acquisition rates and improve temporal resolution and contrast in gradient-echo blood oxygen level-dependent (BOLD) functional MRI (fMRI) experiments. Through-plane signal loss due to B(0) inhomogeneities at air-tissue interfaces limits fMRI of structures near the nasal cavity and ear canals. This study implemented spectral-spatial (SPSP) radiofrequency pulses for reduced through-plane signal loss across multiple simultaneously excited slices.

Three-dimensional Fourier encoding of simultaneously excited slices: generalized acquisition and reconstruction framework.

Purpose: Simultaneous multislice (SMS) acquisitions have recently received much attention as a means of increasing single-shot imaging speed. SMS acquisitions combine the advantages of single-shot sampling and acceleration along the slice dimension which was previously limited to three-dimensional (3D) volumetric acquisitions. A two-dimensional description of SMS sampling and reconstruction has become established in the literature.

Impact of methamphetamine on regional metabolism and cerebral blood flow after traumatic brain injury.

Background: Substance abuse is a frequent comorbid condition among patients with traumatic brain injury (TBI), but little is known about its potential additive or interactive effects on tissue injury or recovery from TBI. This study aims to evaluate changes in regional metabolism and cerebral perfusion in subjects who used methamphetamine (METH) prior to sustaining a TBI. We hypothesized that METH use would decrease pericontusional cerebral perfusion and markers of neuronal metabolism, in TBI patients compared to those without METH use.

Simultaneous multislice excitation by parallel transmission.

Purpose: A technique is described for simultaneous multislice (SMS) excitation using radiofrequency (RF) parallel transmission (pTX).

Methods: Spatially distinct slices are simultaneously excited by applying different RF frequencies on groups of elements of a multichannel transmit array. The localized transmit sensitivities of the coil geometry are thereby exploited to reduce RF power.

Single-shot echo-planar imaging with Nyquist ghost compensation: interleaved dual echo with acceleration (IDEA) echo-planar imaging (EPI).

Echo planar imaging (EPI) is most commonly used for blood oxygen level-dependent fMRI, owing to its sensitivity and acquisition speed. A major problem with EPI is Nyquist (N/2) ghosting, most notably at high field. EPI data are acquired under an oscillating readout gradient and hence vulnerable to gradient imperfections such as eddy current delays and off-resonance effects, as these cause inconsistencies between odd and even k-space lines after time reversal.

Spectral decomposition of susceptibility artifacts for spectral-spatial radiofrequency pulse design.

Susceptibility induced signal loss is a limitation in gradient echo functional MRI. The through-plane artifact in axial slices is particularly problematic due to the inferior position of air cavities in the brain. Spectral-spatial radiofrequency pulses have recently been shown to reduce signal loss in a single excitation.

Altered brain activation during visuomotor integration in chronic active cannabis users: relationship to cortisol levels.

Cannabis is the most abused illegal substance in the United States. Alterations in brain function and motor behavior have been reported in chronic cannabis users, but the results have been variable. The current study aimed to determine whether chronic active cannabis use in humans may alter psychomotor function, brain activation, and hypothalamic-pituitary-axis (HPA) function in men and women.

Simple analytical dual-band spectral-spatial RF pulses for B(1) + and susceptibility artifact reduction in gradient echo MRI.

Susceptibility artifacts and transmission radio frequency (RF) field (B(1) +) inhomogeneity are major limitations in high-field gradient echo MRI. Previously proposed numerical 2D spectral-spatial RF pulses have been shown to be promising for reducing the through-plane signal loss susceptibility artifact by incorporating a frequency-dependent through-plane phase correction. This method has recently been extended to 4D spectral-spatial RF pulse designs for reducing B(1) + inhomogeneity as well as the signal loss.

Accelerated multidimensional radiofrequency pulse design for parallel transmission using concurrent computation on multiple graphics processing units.

Multidimensional radiofrequency (RF) pulses are of current interest because of their promise for improving high-field imaging and for optimizing parallel transmission methods. One major drawback is that the computation time of numerically designed multidimensional RF pulses increases rapidly with their resolution and number of transmitters. This is critical because the construction of multidimensional RF pulses often needs to be in real time.