Publications by authors named "Ana Maria Restrepo Sierra"

Replication, heredity, and evolution are characteristic of Life. We and others have postulated that the reconstruction of a synthetic living system in the laboratory will be contingent on the development of a genetic self-replicator capable of undergoing Darwinian evolution. Although DNA-based life dominates, the in vitro reconstitution of an evolving DNA self-replicator has remained challenging.

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The reconstitution of basic cellular functions in micrometer-sized liposomes has led to a surge of interest in the construction of synthetic cells. Microscopy and flow cytometry are powerful tools for characterizing biological processes in liposomes with fluorescence readouts. However, applying each method separately leads to a compromise between information-rich imaging by microscopy and statistical population analysis by flow cytometry.

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Article Synopsis
  • In cell-free gene expression, low DNA concentration can limit protein production, hindering protein evolution efforts.
  • The CADGE strategy enhances this process by using isothermal amplification with minimal Φ29 machinery to increase DNA availability and promote in situ transcription-translation.
  • CADGE not only improves protein output in various settings but also enables the extraction of specific DNA variants from libraries, making it a valuable tool for protein engineering and synthetic biology.
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Cell-free transcription and translation systems promise to accelerate and simplify the engineering of proteins, biological circuits and metabolic pathways. Their encapsulation on microfluidic platforms can generate millions of cell-free reactions in picoliter volume droplets. However, current methods struggle to create DNA diversity between droplets while also reaching sufficient protein expression levels.

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The cysteine protease AvrPphB activates the resistance protein RPS5 by cleaving a second host protein, PBS1. AvrPphB induces defense responses in other plant species, but the genes and mechanisms mediating AvrPphB recognition in those species have not been defined. Here, we show that AvrPphB induces defense responses in diverse barley cultivars.

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